Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15888447

Identifier: 15888447

GI number: 15888447

Start: 1097302

End: 1098390

Strand: Reverse

Name: 15888447

Synonym: Atu1107

Alternate gene names: NA

Gene position: 1098390-1097302 (Counterclockwise)

Preceding gene: 15888448

Following gene: 15888446

Centisome position: 38.65

GC content: 57.48

Gene sequence:

>1089_bases
ATGATTTTCAACACGCTCGCCCGGTATTTCCTGAAGCGATATCTGATGACGACCATCTGGTTCGTGCTCGGCGTATCGTC
GATCATCTATCTCGCCGATTTCAGCGAGACGGCACGGCGTATGTCCGGCCTGCCCGGTTATTCCGTGCCGGCTGCGCTTG
GCCTGACCGCGCTTCGCCTGCCGCTGATCCTGCAGCAGACCGTTCCTTTCATCGCGCTTTTCGTCGGCATGACGACGCTG
ATCTCGCTCAACCGGCGTTACGAACTGGTGGTGACGCGTGCCGCGGGCATTTCCGCCTGGCAATTCATCCTCCCCTTCGT
GCTCGGCGCGGTTTTCATCGGCATCCTGTCCGTTATGGTCCTCAACCCCATCGCCGCGTGGGGCCAGAACAAGTCGCTGG
CCATGGAAGCCGGCCTGCGCAACGACGCAGGTGGCGGCCGCCAGCAGGAGATCATTCCGTGGATGCGCCAGTCGAGCGGC
GGCAAGGATACGATCATCGGCGCCAAGAGCTTCGAAGACAACGGAACGATGCTTCTCGACGTGGTTCTCATCGACGTCGA
CAAGGACGGAAACATCGTCTCGCGGAAGGATGCGAAGTCGGCTAAATTGGAAGATGGTTACTGGCTTCTTAACGGCGTTT
CAGAAACGCGCGCCGGACATGTGCCAGTTCGGCAAGAAAGCATGCAGATCAGTACCAATCTGAGACGGGAGTTCGTCCAG
GAGCGTATGACGCAGACGGAAACCGTTGCTTTCTTTGACCTTTCTCACAAGATCGAAGTTGCAAAGTCCTTTGGACTATC
TTCAAAGGCGCTTGAGACGCAGTATCATTTCCTGCTATCGACGCCCCTTCTTCTGGTCGCGATGACCTTGATCGCCGCGA
CCGTTTCATTAAAGTTCAGCCGCTTCGCCCAGTCGCGCTCCGTGATTCTGGGTGGAATCGTTTCCGGCTTCGTGCTTTAT
GTAGTAACCGTGCTCGTAAGGGCATTCGGGAGTGGTGGTGTTGTCCCTCCCACCGTTGCGGTCTGGGTTCCAGTTATCGT
GGCGTTGGCTTTGGGGGCAACCATTCTGCTTCATCAGGAGGACGGCTAG

Upstream 100 bases:

>100_bases
GCCGCAAGCCGAAAATGCCGAAGGTGATCGTGGATGCGGCGGGTCGCCTGCGCCGTCTCTTCTCCAGCCGGATGGTGAAA
AACCCGGGGAGCGGTAACAC

Downstream 100 bases:

>100_bases
TGGCGGTATATGACCGCGGGAATATCAGGCGGCTTTGGACGGCCCTTCTGACAGGTGCCGCTGTGTGCGCGTATTTGGCA
TCCAGCCCGGTCGCTTTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Permease YjgP/YjgQ; Permease YjgP/YjgQ Family; Permease; Permease Protein; YjgP/YjgQ Family Permease; YjgP/YjgQ Permease; Transmembrane Protein; Transporter YjgP/YjgQ; Permease Yjgp/Yjgq Family Protein; Permease YjgP

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MIFNTLARYFLKRYLMTTIWFVLGVSSIIYLADFSETARRMSGLPGYSVPAALGLTALRLPLILQQTVPFIALFVGMTTL
ISLNRRYELVVTRAAGISAWQFILPFVLGAVFIGILSVMVLNPIAAWGQNKSLAMEAGLRNDAGGGRQQEIIPWMRQSSG
GKDTIIGAKSFEDNGTMLLDVVLIDVDKDGNIVSRKDAKSAKLEDGYWLLNGVSETRAGHVPVRQESMQISTNLRREFVQ
ERMTQTETVAFFDLSHKIEVAKSFGLSSKALETQYHFLLSTPLLLVAMTLIAATVSLKFSRFAQSRSVILGGIVSGFVLY
VVTVLVRAFGSGGVVPPTVAVWVPVIVALALGATILLHQEDG

Sequences:

>Translated_362_residues
MIFNTLARYFLKRYLMTTIWFVLGVSSIIYLADFSETARRMSGLPGYSVPAALGLTALRLPLILQQTVPFIALFVGMTTL
ISLNRRYELVVTRAAGISAWQFILPFVLGAVFIGILSVMVLNPIAAWGQNKSLAMEAGLRNDAGGGRQQEIIPWMRQSSG
GKDTIIGAKSFEDNGTMLLDVVLIDVDKDGNIVSRKDAKSAKLEDGYWLLNGVSETRAGHVPVRQESMQISTNLRREFVQ
ERMTQTETVAFFDLSHKIEVAKSFGLSSKALETQYHFLLSTPLLLVAMTLIAATVSLKFSRFAQSRSVILGGIVSGFVLY
VVTVLVRAFGSGGVVPPTVAVWVPVIVALALGATILLHQEDG
>Mature_362_residues
MIFNTLARYFLKRYLMTTIWFVLGVSSIIYLADFSETARRMSGLPGYSVPAALGLTALRLPLILQQTVPFIALFVGMTTL
ISLNRRYELVVTRAAGISAWQFILPFVLGAVFIGILSVMVLNPIAAWGQNKSLAMEAGLRNDAGGGRQQEIIPWMRQSSG
GKDTIIGAKSFEDNGTMLLDVVLIDVDKDGNIVSRKDAKSAKLEDGYWLLNGVSETRAGHVPVRQESMQISTNLRREFVQ
ERMTQTETVAFFDLSHKIEVAKSFGLSSKALETQYHFLLSTPLLLVAMTLIAATVSLKFSRFAQSRSVILGGIVSGFVLY
VVTVLVRAFGSGGVVPPTVAVWVPVIVALALGATILLHQEDG

Specific function: Unknown

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39518; Mature: 39518

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFNTLARYFLKRYLMTTIWFVLGVSSIIYLADFSETARRMSGLPGYSVPAALGLTALRL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
PLILQQTVPFIALFVGMTTLISLNRRYELVVTRAAGISAWQFILPFVLGAVFIGILSVMV
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
LNPIAAWGQNKSLAMEAGLRNDAGGGRQQEIIPWMRQSSGGKDTIIGAKSFEDNGTMLLD
HHHHHHCCCCCCEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEE
VVLIDVDKDGNIVSRKDAKSAKLEDGYWLLNGVSETRAGHVPVRQESMQISTNLRREFVQ
EEEEEECCCCCEECCCCCCCCCCCCCEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHH
ERMTQTETVAFFDLSHKIEVAKSFGLSSKALETQYHFLLSTPLLLVAMTLIAATVSLKFS
HHHHHHHHEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFAQSRSVILGGIVSGFVLYVVTVLVRAFGSGGVVPPTVAVWVPVIVALALGATILLHQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEC
DG
CC
>Mature Secondary Structure
MIFNTLARYFLKRYLMTTIWFVLGVSSIIYLADFSETARRMSGLPGYSVPAALGLTALRL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
PLILQQTVPFIALFVGMTTLISLNRRYELVVTRAAGISAWQFILPFVLGAVFIGILSVMV
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
LNPIAAWGQNKSLAMEAGLRNDAGGGRQQEIIPWMRQSSGGKDTIIGAKSFEDNGTMLLD
HHHHHHCCCCCCEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEE
VVLIDVDKDGNIVSRKDAKSAKLEDGYWLLNGVSETRAGHVPVRQESMQISTNLRREFVQ
EEEEEECCCCCEECCCCCCCCCCCCCEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHH
ERMTQTETVAFFDLSHKIEVAKSFGLSSKALETQYHFLLSTPLLLVAMTLIAATVSLKFS
HHHHHHHHEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFAQSRSVILGGIVSGFVLYVVTVLVRAFGSGGVVPPTVAVWVPVIVALALGATILLHQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEC
DG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA