Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888447
Identifier: 15888447
GI number: 15888447
Start: 1097302
End: 1098390
Strand: Reverse
Name: 15888447
Synonym: Atu1107
Alternate gene names: NA
Gene position: 1098390-1097302 (Counterclockwise)
Preceding gene: 15888448
Following gene: 15888446
Centisome position: 38.65
GC content: 57.48
Gene sequence:
>1089_bases ATGATTTTCAACACGCTCGCCCGGTATTTCCTGAAGCGATATCTGATGACGACCATCTGGTTCGTGCTCGGCGTATCGTC GATCATCTATCTCGCCGATTTCAGCGAGACGGCACGGCGTATGTCCGGCCTGCCCGGTTATTCCGTGCCGGCTGCGCTTG GCCTGACCGCGCTTCGCCTGCCGCTGATCCTGCAGCAGACCGTTCCTTTCATCGCGCTTTTCGTCGGCATGACGACGCTG ATCTCGCTCAACCGGCGTTACGAACTGGTGGTGACGCGTGCCGCGGGCATTTCCGCCTGGCAATTCATCCTCCCCTTCGT GCTCGGCGCGGTTTTCATCGGCATCCTGTCCGTTATGGTCCTCAACCCCATCGCCGCGTGGGGCCAGAACAAGTCGCTGG CCATGGAAGCCGGCCTGCGCAACGACGCAGGTGGCGGCCGCCAGCAGGAGATCATTCCGTGGATGCGCCAGTCGAGCGGC GGCAAGGATACGATCATCGGCGCCAAGAGCTTCGAAGACAACGGAACGATGCTTCTCGACGTGGTTCTCATCGACGTCGA CAAGGACGGAAACATCGTCTCGCGGAAGGATGCGAAGTCGGCTAAATTGGAAGATGGTTACTGGCTTCTTAACGGCGTTT CAGAAACGCGCGCCGGACATGTGCCAGTTCGGCAAGAAAGCATGCAGATCAGTACCAATCTGAGACGGGAGTTCGTCCAG GAGCGTATGACGCAGACGGAAACCGTTGCTTTCTTTGACCTTTCTCACAAGATCGAAGTTGCAAAGTCCTTTGGACTATC TTCAAAGGCGCTTGAGACGCAGTATCATTTCCTGCTATCGACGCCCCTTCTTCTGGTCGCGATGACCTTGATCGCCGCGA CCGTTTCATTAAAGTTCAGCCGCTTCGCCCAGTCGCGCTCCGTGATTCTGGGTGGAATCGTTTCCGGCTTCGTGCTTTAT GTAGTAACCGTGCTCGTAAGGGCATTCGGGAGTGGTGGTGTTGTCCCTCCCACCGTTGCGGTCTGGGTTCCAGTTATCGT GGCGTTGGCTTTGGGGGCAACCATTCTGCTTCATCAGGAGGACGGCTAG
Upstream 100 bases:
>100_bases GCCGCAAGCCGAAAATGCCGAAGGTGATCGTGGATGCGGCGGGTCGCCTGCGCCGTCTCTTCTCCAGCCGGATGGTGAAA AACCCGGGGAGCGGTAACAC
Downstream 100 bases:
>100_bases TGGCGGTATATGACCGCGGGAATATCAGGCGGCTTTGGACGGCCCTTCTGACAGGTGCCGCTGTGTGCGCGTATTTGGCA TCCAGCCCGGTCGCTTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Permease YjgP/YjgQ; Permease YjgP/YjgQ Family; Permease; Permease Protein; YjgP/YjgQ Family Permease; YjgP/YjgQ Permease; Transmembrane Protein; Transporter YjgP/YjgQ; Permease Yjgp/Yjgq Family Protein; Permease YjgP
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MIFNTLARYFLKRYLMTTIWFVLGVSSIIYLADFSETARRMSGLPGYSVPAALGLTALRLPLILQQTVPFIALFVGMTTL ISLNRRYELVVTRAAGISAWQFILPFVLGAVFIGILSVMVLNPIAAWGQNKSLAMEAGLRNDAGGGRQQEIIPWMRQSSG GKDTIIGAKSFEDNGTMLLDVVLIDVDKDGNIVSRKDAKSAKLEDGYWLLNGVSETRAGHVPVRQESMQISTNLRREFVQ ERMTQTETVAFFDLSHKIEVAKSFGLSSKALETQYHFLLSTPLLLVAMTLIAATVSLKFSRFAQSRSVILGGIVSGFVLY VVTVLVRAFGSGGVVPPTVAVWVPVIVALALGATILLHQEDG
Sequences:
>Translated_362_residues MIFNTLARYFLKRYLMTTIWFVLGVSSIIYLADFSETARRMSGLPGYSVPAALGLTALRLPLILQQTVPFIALFVGMTTL ISLNRRYELVVTRAAGISAWQFILPFVLGAVFIGILSVMVLNPIAAWGQNKSLAMEAGLRNDAGGGRQQEIIPWMRQSSG GKDTIIGAKSFEDNGTMLLDVVLIDVDKDGNIVSRKDAKSAKLEDGYWLLNGVSETRAGHVPVRQESMQISTNLRREFVQ ERMTQTETVAFFDLSHKIEVAKSFGLSSKALETQYHFLLSTPLLLVAMTLIAATVSLKFSRFAQSRSVILGGIVSGFVLY VVTVLVRAFGSGGVVPPTVAVWVPVIVALALGATILLHQEDG >Mature_362_residues MIFNTLARYFLKRYLMTTIWFVLGVSSIIYLADFSETARRMSGLPGYSVPAALGLTALRLPLILQQTVPFIALFVGMTTL ISLNRRYELVVTRAAGISAWQFILPFVLGAVFIGILSVMVLNPIAAWGQNKSLAMEAGLRNDAGGGRQQEIIPWMRQSSG GKDTIIGAKSFEDNGTMLLDVVLIDVDKDGNIVSRKDAKSAKLEDGYWLLNGVSETRAGHVPVRQESMQISTNLRREFVQ ERMTQTETVAFFDLSHKIEVAKSFGLSSKALETQYHFLLSTPLLLVAMTLIAATVSLKFSRFAQSRSVILGGIVSGFVLY VVTVLVRAFGSGGVVPPTVAVWVPVIVALALGATILLHQEDG
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39518; Mature: 39518
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFNTLARYFLKRYLMTTIWFVLGVSSIIYLADFSETARRMSGLPGYSVPAALGLTALRL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH PLILQQTVPFIALFVGMTTLISLNRRYELVVTRAAGISAWQFILPFVLGAVFIGILSVMV HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH LNPIAAWGQNKSLAMEAGLRNDAGGGRQQEIIPWMRQSSGGKDTIIGAKSFEDNGTMLLD HHHHHHCCCCCCEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEE VVLIDVDKDGNIVSRKDAKSAKLEDGYWLLNGVSETRAGHVPVRQESMQISTNLRREFVQ EEEEEECCCCCEECCCCCCCCCCCCCEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHH ERMTQTETVAFFDLSHKIEVAKSFGLSSKALETQYHFLLSTPLLLVAMTLIAATVSLKFS HHHHHHHHEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFAQSRSVILGGIVSGFVLYVVTVLVRAFGSGGVVPPTVAVWVPVIVALALGATILLHQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEC DG CC >Mature Secondary Structure MIFNTLARYFLKRYLMTTIWFVLGVSSIIYLADFSETARRMSGLPGYSVPAALGLTALRL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH PLILQQTVPFIALFVGMTTLISLNRRYELVVTRAAGISAWQFILPFVLGAVFIGILSVMV HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH LNPIAAWGQNKSLAMEAGLRNDAGGGRQQEIIPWMRQSSGGKDTIIGAKSFEDNGTMLLD HHHHHHCCCCCCEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEE VVLIDVDKDGNIVSRKDAKSAKLEDGYWLLNGVSETRAGHVPVRQESMQISTNLRREFVQ EEEEEECCCCCEECCCCCCCCCCCCCEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHH ERMTQTETVAFFDLSHKIEVAKSFGLSSKALETQYHFLLSTPLLLVAMTLIAATVSLKFS HHHHHHHHEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFAQSRSVILGGIVSGFVLYVVTVLVRAFGSGGVVPPTVAVWVPVIVALALGATILLHQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEC DG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA