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The map label for this gene is yoqW [H]

Identifier: 15888401

GI number: 15888401

Start: 1049426

End: 1050187

Strand: Direct

Name: yoqW [H]

Synonym: Atu1059

Alternate gene names: 15888401

Gene position: 1049426-1050187 (Clockwise)

Preceding gene: 159184596

Following gene: 159184601

Centisome position: 36.93

GC content: 62.07

Gene sequence:

>762_bases
ATGTGCGGACGTTTCGTGCTAAAGGCAACGCCGGAAGAGATCGCCGATTATCTCGATCTGATCGGCCTTGAGGATTTTCC
CGCCCGTTTCAACATCGCGCCGACCCAACCCATTCTGGTCGTCATGGAAGGCGAGCAGCAGGAGCGCGGCAGCAACCTGC
CCAACCGCCGGGCCGTGCTGGTGCGCTGGGGTTTCATGCCGGGCTGGGTGAAGGATCCGAAGGACTTTCCGCTGCTCATC
AATGCCCGTTCCGAAACCGCAATCGGCAAGGCCTCCTTCCGAGCCGCCATGCGCCATCGCCGCGTGCTCATCCCGGCAAC
CGGCTTTTACGAATGGCGACGCCCGCCAAAGGAGGAGGGCGGCAAAGCCCAGCCCTATTTTATCCGCCCGAAAAACGGCG
GCATCGTTGCTTTCGCCGGCCTCATGGAAACCTGGTCTTCTGCCGACGGCTCGGAGGTCGATACCGGCGCGATCCTCACC
ACCGCCGCCAATGCCGCGATCGGCCGTATTCACGATCGTATGCCCGTTGTCATTGCGCCGGAGGATTTCAGCCGCTGGCT
GGACTGCAAGACCCAGGAGCCACGCGAGGTCGCTGATCTGATGCGACCGGTTCAGGGTGATTTCTTCGAGATGATTCCGG
TCTCGGACAAGGTCAACAAGGTCGCCAATGTCGGGGCCGATCTCATCGATCCGGTGCCGGAAAGCGCGCCGCTGGCGAAG
GTCAGGCCGGCGAAGGATGACGGGCAGATGTCGCTGTTTTGA

Upstream 100 bases:

>100_bases
GAAGGCCATGCACCGGACAGGTGGGATATTGCCGGCGGTGTCGTCTGCCTTGCCGGCACCGCCATCATCCTGTTCGGACC
AAGGGGTTGAGGAGAAGGCC

Downstream 100 bases:

>100_bases
GGCGTTTTTTGTGCCTAGAGACTAGAGCTGAGCGTTGCCGCGGCCTTCAGCCGTTCAGCCCGATTTTCTGCAGGCCTTCC
TGGATCATGATGTCGGAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MCGRFVLKATPEEIADYLDLIGLEDFPARFNIAPTQPILVVMEGEQQERGSNLPNRRAVLVRWGFMPGWVKDPKDFPLLI
NARSETAIGKASFRAAMRHRRVLIPATGFYEWRRPPKEEGGKAQPYFIRPKNGGIVAFAGLMETWSSADGSEVDTGAILT
TAANAAIGRIHDRMPVVIAPEDFSRWLDCKTQEPREVADLMRPVQGDFFEMIPVSDKVNKVANVGADLIDPVPESAPLAK
VRPAKDDGQMSLF

Sequences:

>Translated_253_residues
MCGRFVLKATPEEIADYLDLIGLEDFPARFNIAPTQPILVVMEGEQQERGSNLPNRRAVLVRWGFMPGWVKDPKDFPLLI
NARSETAIGKASFRAAMRHRRVLIPATGFYEWRRPPKEEGGKAQPYFIRPKNGGIVAFAGLMETWSSADGSEVDTGAILT
TAANAAIGRIHDRMPVVIAPEDFSRWLDCKTQEPREVADLMRPVQGDFFEMIPVSDKVNKVANVGADLIDPVPESAPLAK
VRPAKDDGQMSLF
>Mature_253_residues
MCGRFVLKATPEEIADYLDLIGLEDFPARFNIAPTQPILVVMEGEQQERGSNLPNRRAVLVRWGFMPGWVKDPKDFPLLI
NARSETAIGKASFRAAMRHRRVLIPATGFYEWRRPPKEEGGKAQPYFIRPKNGGIVAFAGLMETWSSADGSEVDTGAILT
TAANAAIGRIHDRMPVVIAPEDFSRWLDCKTQEPREVADLMRPVQGDFFEMIPVSDKVNKVANVGADLIDPVPESAPLAK
VRPAKDDGQMSLF

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0361 family [H]

Homologues:

Organism=Homo sapiens, GI54607106, Length=275, Percent_Identity=26.9090909090909, Blast_Score=84, Evalue=9e-17,
Organism=Homo sapiens, GI54607104, Length=275, Percent_Identity=26.9090909090909, Blast_Score=84, Evalue=9e-17,
Organism=Escherichia coli, GI48994894, Length=243, Percent_Identity=35.8024691358025, Blast_Score=110, Evalue=6e-26,
Organism=Saccharomyces cerevisiae, GI6323761, Length=232, Percent_Identity=27.1551724137931, Blast_Score=86, Evalue=7e-18,
Organism=Drosophila melanogaster, GI21355761, Length=253, Percent_Identity=24.901185770751, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003738 [H]

Pfam domain/function: PF02586 DUF159 [H]

EC number: NA

Molecular weight: Translated: 28062; Mature: 28062

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRFVLKATPEEIADYLDLIGLEDFPARFNIAPTQPILVVMEGEQQERGSNLPNRRAVL
CCCCEEEECCHHHHHHHHHHCCCCCCCCCEECCCCCCEEEEEECCHHHHCCCCCCCCEEE
VRWGFMPGWVKDPKDFPLLINARSETAIGKASFRAAMRHRRVLIPATGFYEWRRPPKEEG
EEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCEEEEECCCCHHHCCCCHHCC
GKAQPYFIRPKNGGIVAFAGLMETWSSADGSEVDTGAILTTAANAAIGRIHDRMPVVIAP
CCCCCEEEECCCCCEEEEHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCEEECC
EDFSRWLDCKTQEPREVADLMRPVQGDFFEMIPVSDKVNKVANVGADLIDPVPESAPLAK
HHHHHHHCCCCCCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHCCHHHHCCCCCCCCCCC
VRPAKDDGQMSLF
CCCCCCCCCEECC
>Mature Secondary Structure
MCGRFVLKATPEEIADYLDLIGLEDFPARFNIAPTQPILVVMEGEQQERGSNLPNRRAVL
CCCCEEEECCHHHHHHHHHHCCCCCCCCCEECCCCCCEEEEEECCHHHHCCCCCCCCEEE
VRWGFMPGWVKDPKDFPLLINARSETAIGKASFRAAMRHRRVLIPATGFYEWRRPPKEEG
EEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCEEEEECCCCHHHCCCCHHCC
GKAQPYFIRPKNGGIVAFAGLMETWSSADGSEVDTGAILTTAANAAIGRIHDRMPVVIAP
CCCCCEEEECCCCCEEEEHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCEEECC
EDFSRWLDCKTQEPREVADLMRPVQGDFFEMIPVSDKVNKVANVGADLIDPVPESAPLAK
HHHHHHHCCCCCCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHCCHHHHCCCCCCCCCCC
VRPAKDDGQMSLF
CCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]