Click here to switch to the map view.

The map label for this gene is bioC [C]

Identifier: 15888383

GI number: 15888383

Start: 1032848

End: 1033582

Strand: Direct

Name: bioC [C]

Synonym: Atu1041

Alternate gene names: 15888383

Gene position: 1032848-1033582 (Clockwise)

Preceding gene: 15888381

Following gene: 15888388

Centisome position: 36.35

GC content: 58.91

Gene sequence:

>735_bases
ATGAAACAGAATATCTACGACGACGCAGGATTTTTCGAACGTTATAGCGCCATGCCGCGTTCCATCGAGGGTTTGCGCCA
GGCCGGCGAATGGCATGAGCTGCGCGCCATGTTGCCGGACCTGAAAGGCAGGTCTTTTCTCGATCTCGGTTGCGGTTTCG
GCTGGCATTGTCGTTATGCGGCGGAGCAGGGGGCGGCCCGCATTGTCGGCGTCGATCTCTCGGAAAACATGCTGCGCCGC
GCTGCCGAAATCAATGGCGGGCCGGGCATCGATTATCGCCGGGCGGCGATCGAAGACATCGATTTTCCGCGGGAGAGTTT
CGATGTGGTGCTGAGTTCGCTCGCGCTCCACTACGTCCGTGATCTCGACGCGGCATTCGCAAAGATTTTCGCTGTGCTGA
AGGCGGGCGGCGATTTCGTGTTTTCCATTGAGCATCCGGTCTTCACGGCGCTGGAAAAACAGGACTGGTTTTATGGCGAG
GGTGGCGAAATCCTGCACTGGCCGCTCGACAACTACCAGAACGAGGGCGTGCGCCACTCCAACTGGATGGCGGATGATGT
AGTCAAATATCACCGCACCGTGTCAGGCATTCTCAATGGCTTGCTGTCTGCCGGTTTTGCCCTGACGCAGCTGGCGGAAC
CACGGCCTGATCCGGCTTTGATGGCCGAGCGGCCAGAACTGAAGCACGAGGATCGCCGCCCGATCTTTCTGATTGTCGGG
GCGAAGAAGCCGTGA

Upstream 100 bases:

>100_bases
TGATGGGATGAATATTATCTTTTGTCAGGCTGTCCCACTAGCGACTTTTCTTGACGGCCATTATTCATGGCATTGATGGA
ATACGGTCGGAGCGACGACG

Downstream 100 bases:

>100_bases
CTTGAGACTCCGCATCGCATTTGCGGGTGTGAAACAATGATGGAGATCGGCGCGTCCAGCCCAAGTCCTTGGGCTGAAAA
TAGTCTCTCCGCCGCGCCGA

Product: methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MKQNIYDDAGFFERYSAMPRSIEGLRQAGEWHELRAMLPDLKGRSFLDLGCGFGWHCRYAAEQGAARIVGVDLSENMLRR
AAEINGGPGIDYRRAAIEDIDFPRESFDVVLSSLALHYVRDLDAAFAKIFAVLKAGGDFVFSIEHPVFTALEKQDWFYGE
GGEILHWPLDNYQNEGVRHSNWMADDVVKYHRTVSGILNGLLSAGFALTQLAEPRPDPALMAERPELKHEDRRPIFLIVG
AKKP

Sequences:

>Translated_244_residues
MKQNIYDDAGFFERYSAMPRSIEGLRQAGEWHELRAMLPDLKGRSFLDLGCGFGWHCRYAAEQGAARIVGVDLSENMLRR
AAEINGGPGIDYRRAAIEDIDFPRESFDVVLSSLALHYVRDLDAAFAKIFAVLKAGGDFVFSIEHPVFTALEKQDWFYGE
GGEILHWPLDNYQNEGVRHSNWMADDVVKYHRTVSGILNGLLSAGFALTQLAEPRPDPALMAERPELKHEDRRPIFLIVG
AKKP
>Mature_244_residues
MKQNIYDDAGFFERYSAMPRSIEGLRQAGEWHELRAMLPDLKGRSFLDLGCGFGWHCRYAAEQGAARIVGVDLSENMLRR
AAEINGGPGIDYRRAAIEDIDFPRESFDVVLSSLALHYVRDLDAAFAKIFAVLKAGGDFVFSIEHPVFTALEKQDWFYGE
GGEILHWPLDNYQNEGVRHSNWMADDVVKYHRTVSGILNGLLSAGFALTQLAEPRPDPALMAERPELKHEDRRPIFLIVG
AKKP

Specific function: Bioc Is Involved In An Early, But Chemically Unexplored, Step In The Conversion Of Pimelic Acid To Biotin. [C]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 27496; Mature: 27496

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQNIYDDAGFFERYSAMPRSIEGLRQAGEWHELRAMLPDLKGRSFLDLGCGFGWHCRYA
CCCCCCCCHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEECCCCCCEEEEH
AEQGAARIVGVDLSENMLRRAAEINGGPGIDYRRAAIEDIDFPRESFDVVLSSLALHYVR
HHCCCEEEEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
DLDAAFAKIFAVLKAGGDFVFSIEHPVFTALEKQDWFYGEGGEILHWPLDNYQNEGVRHS
HHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCEECCCCCEEECCCCCCCCCCCCCC
NWMADDVVKYHRTVSGILNGLLSAGFALTQLAEPRPDPALMAERPELKHEDRRPIFLIVG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCEEEEEE
AKKP
CCCC
>Mature Secondary Structure
MKQNIYDDAGFFERYSAMPRSIEGLRQAGEWHELRAMLPDLKGRSFLDLGCGFGWHCRYA
CCCCCCCCHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEECCCCCCEEEEH
AEQGAARIVGVDLSENMLRRAAEINGGPGIDYRRAAIEDIDFPRESFDVVLSSLALHYVR
HHCCCEEEEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
DLDAAFAKIFAVLKAGGDFVFSIEHPVFTALEKQDWFYGEGGEILHWPLDNYQNEGVRHS
HHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCEECCCCCEEECCCCCCCCCCCCCC
NWMADDVVKYHRTVSGILNGLLSAGFALTQLAEPRPDPALMAERPELKHEDRRPIFLIVG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCEEEEEE
AKKP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]