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The map label for this gene is yafQ [H]

Identifier: 15888273

GI number: 15888273

Start: 924141

End: 924476

Strand: Reverse

Name: yafQ [H]

Synonym: Atu0934

Alternate gene names: 15888273

Gene position: 924476-924141 (Counterclockwise)

Preceding gene: 15888274

Following gene: 15888270

Centisome position: 32.53

GC content: 54.46

Gene sequence:

>336_bases
GTGACGAATAAGAAAGATCACGGAAAAGACGCGGCATTGAAGCGAGCCACCCTGCCGCGCAGGTCGGATTTCACCAAGCA
ATTTATCAAAGACTGGCAACGGCTGAACAATTCCGGGCGTTACGACATGGTGAGACTGAAGGAGATCATGCTCCTTCTTA
TCGCCAACGGCGCGCCGTTACCGACGCAGTTTCGTGACCATGAACTGACCGGAGACTGGCGCGATCACCGGGAATGCCAT
GTCGGCGGGGATTTTCTGTTGATCTACACAGTCGATGAGAAGCAGAACCTTCTCATCTTCACCCGCGCGGGAACGCACGC
CGAGCTTTTCAGGTAA

Upstream 100 bases:

>100_bases
CCCTTGCCGCGATTGAAGAAGCGCGCGCCATCGCGGCGGCCGGGCGCAATCGTTTCGGCACGTCTGAAGCCTTGTTTGAG
GCGCTGGACGCTGGCAAACG

Downstream 100 bases:

>100_bases
ATGTGCAATCTGAAAGTCACGATCTTGCTACCGATGCACGGCCAGCCGCGGAATATCGCGTAGGAAGGCATCGCGCACGG
CGGGTCCGAGCGGCTCGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MTNKKDHGKDAALKRATLPRRSDFTKQFIKDWQRLNNSGRYDMVRLKEIMLLLIANGAPLPTQFRDHELTGDWRDHRECH
VGGDFLLIYTVDEKQNLLIFTRAGTHAELFR

Sequences:

>Translated_111_residues
MTNKKDHGKDAALKRATLPRRSDFTKQFIKDWQRLNNSGRYDMVRLKEIMLLLIANGAPLPTQFRDHELTGDWRDHRECH
VGGDFLLIYTVDEKQNLLIFTRAGTHAELFR
>Mature_110_residues
TNKKDHGKDAALKRATLPRRSDFTKQFIKDWQRLNNSGRYDMVRLKEIMLLLIANGAPLPTQFRDHELTGDWRDHRECHV
GGDFLLIYTVDEKQNLLIFTRAGTHAELFR

Specific function: Unknown

COG id: COG3041

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0711 [H]

Homologues:

Organism=Escherichia coli, GI1786419, Length=91, Percent_Identity=43.956043956044, Blast_Score=75, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004386
- InterPro:   IPR012753 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13024; Mature: 12893

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNKKDHGKDAALKRATLPRRSDFTKQFIKDWQRLNNSGRYDMVRLKEIMLLLIANGAPL
CCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC
PTQFRDHELTGDWRDHRECHVGGDFLLIYTVDEKQNLLIFTRAGTHAELFR
CCCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCEEEEEECCCCHHHCC
>Mature Secondary Structure 
TNKKDHGKDAALKRATLPRRSDFTKQFIKDWQRLNNSGRYDMVRLKEIMLLLIANGAPL
CCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC
PTQFRDHELTGDWRDHRECHVGGDFLLIYTVDEKQNLLIFTRAGTHAELFR
CCCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCEEEEEECCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7596361; 9278503 [H]