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The map label for this gene is lysE [C]

Identifier: 15888266

GI number: 15888266

Start: 914897

End: 915505

Strand: Reverse

Name: lysE [C]

Synonym: Atu0927

Alternate gene names: 15888266

Gene position: 915505-914897 (Counterclockwise)

Preceding gene: 159184534

Following gene: 15888265

Centisome position: 32.22

GC content: 60.43

Gene sequence:

>609_bases
ATGGACATCCAGATCTTCTTCACCGGCCTCACCATGGGCCTCAGCCTCATCGTCGCCATCGGCGCGCAGAATGCCTTCGT
GCTGAAACAGGGGCTGGCGCGTTCGCATGTGTTTGCCGTCTGCGCTACCTGCGCGATATCAGATGCGCTGCTGATTATGG
TCGGTGTGTTCGGTTTTCAGCGGATCAGCGCGATCATGCCGGCGCTCGATCCCATCATGCGTTATGCGGGGGCGGCTTTT
CTTATCTGGTATGGCGCCAAAAGCCTGTATTCGGCGCTGCGTTCATCCGAGGTGCTGTCTGTGGCCGAGCGGCGGGAGGC
GAGCCTGTGGCAGACGCTTGCCATCTGCCTGGCGCTCACCTTCCTCAATCCGCATGTCTATCTCGATACCGTCGTGCTGC
TCGGCACGATTTCCACGCAGTTTCCCGGTTTCGAAAAGACCTTTGCGGCAGGCGCGGCAACCGGCTCGCTGCTGTTCTTC
TTTTCGCTGGGTTACGGCGCGCGCTGGCTGCGGCCGATCTTCGAAAAACCCTCTGCCTGGCGCATTCTCGAAGGCGTCAT
CGCCATCACCATGTGGGCCATCGCGTTCAAGCTGGTCATGGGTGCGTAG

Upstream 100 bases:

>100_bases
TAACTGGATTAAACCATCCCACCCAAATATCCAAGTACTCGGTCCGCAAGCGAGGGCTTGCGCCATTTCGCATGGACAAA
GACAAGAGGCTTCGACGCGC

Downstream 100 bases:

>100_bases
GGGGGTGCATAAGGGCAGGAATTTCGCGCTCGCGTCACTTTCAAGAGGACTAAACAGGCCACGCCATTTTCCAAACGGGG
AATCAGTGATAGTCCTCGAC

Product: LysE family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MDIQIFFTGLTMGLSLIVAIGAQNAFVLKQGLARSHVFAVCATCAISDALLIMVGVFGFQRISAIMPALDPIMRYAGAAF
LIWYGAKSLYSALRSSEVLSVAERREASLWQTLAICLALTFLNPHVYLDTVVLLGTISTQFPGFEKTFAAGAATGSLLFF
FSLGYGARWLRPIFEKPSAWRILEGVIAITMWAIAFKLVMGA

Sequences:

>Translated_202_residues
MDIQIFFTGLTMGLSLIVAIGAQNAFVLKQGLARSHVFAVCATCAISDALLIMVGVFGFQRISAIMPALDPIMRYAGAAF
LIWYGAKSLYSALRSSEVLSVAERREASLWQTLAICLALTFLNPHVYLDTVVLLGTISTQFPGFEKTFAAGAATGSLLFF
FSLGYGARWLRPIFEKPSAWRILEGVIAITMWAIAFKLVMGA
>Mature_202_residues
MDIQIFFTGLTMGLSLIVAIGAQNAFVLKQGLARSHVFAVCATCAISDALLIMVGVFGFQRISAIMPALDPIMRYAGAAF
LIWYGAKSLYSALRSSEVLSVAERREASLWQTLAICLALTFLNPHVYLDTVVLLGTISTQFPGFEKTFAAGAATGSLLFF
FSLGYGARWLRPIFEKPSAWRILEGVIAITMWAIAFKLVMGA

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=194, Percent_Identity=40.2061855670103, Blast_Score=129, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 21943; Mature: 21943

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIQIFFTGLTMGLSLIVAIGAQNAFVLKQGLARSHVFAVCATCAISDALLIMVGVFGFQ
CCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RISAIMPALDPIMRYAGAAFLIWYGAKSLYSALRSSEVLSVAERREASLWQTLAICLALT
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLNPHVYLDTVVLLGTISTQFPGFEKTFAAGAATGSLLFFFSLGYGARWLRPIFEKPSAW
HHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHCCCCHH
RILEGVIAITMWAIAFKLVMGA
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDIQIFFTGLTMGLSLIVAIGAQNAFVLKQGLARSHVFAVCATCAISDALLIMVGVFGFQ
CCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RISAIMPALDPIMRYAGAAFLIWYGAKSLYSALRSSEVLSVAERREASLWQTLAICLALT
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLNPHVYLDTVVLLGTISTQFPGFEKTFAAGAATGSLLFFFSLGYGARWLRPIFEKPSAW
HHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHCCCCHH
RILEGVIAITMWAIAFKLVMGA
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]