Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888258
Identifier: 15888258
GI number: 15888258
Start: 907934
End: 908359
Strand: Reverse
Name: 15888258
Synonym: Atu0920
Alternate gene names: NA
Gene position: 908359-907934 (Counterclockwise)
Preceding gene: 159184531
Following gene: 15888257
Centisome position: 31.97
GC content: 57.98
Gene sequence:
>426_bases ATGTGGTTTCTGATCAAAGGAACATTCTGGTTTTCGCTGGTGCTCGTGGCGCTGTCCTATATCGGCAGCAGCAACGATCC GGCCAAGGAACCTTCGGCATTTGATCTTCCCAGCGCCGTTTCGGCCGCAGGGGAAGCCTATCGTTATGTCAGCGCCATCT GCATCGAAAAACCCGATGTCTGCGTCAAGGGCGCCGAAACCTTCCATGCTCTCGGAGAGCGGGCAAAGGAAGGCGCAAAG GTTGCCTATGAACTGCTGGACAAGCAGCTTGCCTCCGGTGACAAGCCCGCTGATGTTGCTGACATTGCCGCAGACGCCGA AAAACTGGCGGCAGCCCCCGTTGTCAGCGTCGAATTTCCCGGGAAGCCCGACATGCTGAAGACCGGCACCGTTATTCCCC TGCCGCAGAAGCGCCCAACTCCTTGA
Upstream 100 bases:
>100_bases CTGTAGCTTCATCACAAGCCCGAAAAACGGGACAAAGGCCGATGATCCGAAACCGGGCGGGGCTTTAGAAAACAAAGATC ATCTGGCAGGGTGTCTGACA
Downstream 100 bases:
>100_bases TCTTATCGGTCCCTGATCCTGCCGACCTCTGATTTTCAGAGGCACACCACAGCATTCATTTGCAGACGGATATATCCGTC CGCCCACTGCCTGCCTGACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MWFLIKGTFWFSLVLVALSYIGSSNDPAKEPSAFDLPSAVSAAGEAYRYVSAICIEKPDVCVKGAETFHALGERAKEGAK VAYELLDKQLASGDKPADVADIAADAEKLAAAPVVSVEFPGKPDMLKTGTVIPLPQKRPTP
Sequences:
>Translated_141_residues MWFLIKGTFWFSLVLVALSYIGSSNDPAKEPSAFDLPSAVSAAGEAYRYVSAICIEKPDVCVKGAETFHALGERAKEGAK VAYELLDKQLASGDKPADVADIAADAEKLAAAPVVSVEFPGKPDMLKTGTVIPLPQKRPTP >Mature_141_residues MWFLIKGTFWFSLVLVALSYIGSSNDPAKEPSAFDLPSAVSAAGEAYRYVSAICIEKPDVCVKGAETFHALGERAKEGAK VAYELLDKQLASGDKPADVADIAADAEKLAAAPVVSVEFPGKPDMLKTGTVIPLPQKRPTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14952; Mature: 14952
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWFLIKGTFWFSLVLVALSYIGSSNDPAKEPSAFDLPSAVSAAGEAYRYVSAICIEKPDV CEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC CVKGAETFHALGERAKEGAKVAYELLDKQLASGDKPADVADIAADAEKLAAAPVVSVEFP EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEECC GKPDMLKTGTVIPLPQKRPTP CCCCCCCCCCEEECCCCCCCC >Mature Secondary Structure MWFLIKGTFWFSLVLVALSYIGSSNDPAKEPSAFDLPSAVSAAGEAYRYVSAICIEKPDV CEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC CVKGAETFHALGERAKEGAKVAYELLDKQLASGDKPADVADIAADAEKLAAAPVVSVEFP EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEECC GKPDMLKTGTVIPLPQKRPTP CCCCCCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7756693; 11481430 [H]