Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15888258

Identifier: 15888258

GI number: 15888258

Start: 907934

End: 908359

Strand: Reverse

Name: 15888258

Synonym: Atu0920

Alternate gene names: NA

Gene position: 908359-907934 (Counterclockwise)

Preceding gene: 159184531

Following gene: 15888257

Centisome position: 31.97

GC content: 57.98

Gene sequence:

>426_bases
ATGTGGTTTCTGATCAAAGGAACATTCTGGTTTTCGCTGGTGCTCGTGGCGCTGTCCTATATCGGCAGCAGCAACGATCC
GGCCAAGGAACCTTCGGCATTTGATCTTCCCAGCGCCGTTTCGGCCGCAGGGGAAGCCTATCGTTATGTCAGCGCCATCT
GCATCGAAAAACCCGATGTCTGCGTCAAGGGCGCCGAAACCTTCCATGCTCTCGGAGAGCGGGCAAAGGAAGGCGCAAAG
GTTGCCTATGAACTGCTGGACAAGCAGCTTGCCTCCGGTGACAAGCCCGCTGATGTTGCTGACATTGCCGCAGACGCCGA
AAAACTGGCGGCAGCCCCCGTTGTCAGCGTCGAATTTCCCGGGAAGCCCGACATGCTGAAGACCGGCACCGTTATTCCCC
TGCCGCAGAAGCGCCCAACTCCTTGA

Upstream 100 bases:

>100_bases
CTGTAGCTTCATCACAAGCCCGAAAAACGGGACAAAGGCCGATGATCCGAAACCGGGCGGGGCTTTAGAAAACAAAGATC
ATCTGGCAGGGTGTCTGACA

Downstream 100 bases:

>100_bases
TCTTATCGGTCCCTGATCCTGCCGACCTCTGATTTTCAGAGGCACACCACAGCATTCATTTGCAGACGGATATATCCGTC
CGCCCACTGCCTGCCTGACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MWFLIKGTFWFSLVLVALSYIGSSNDPAKEPSAFDLPSAVSAAGEAYRYVSAICIEKPDVCVKGAETFHALGERAKEGAK
VAYELLDKQLASGDKPADVADIAADAEKLAAAPVVSVEFPGKPDMLKTGTVIPLPQKRPTP

Sequences:

>Translated_141_residues
MWFLIKGTFWFSLVLVALSYIGSSNDPAKEPSAFDLPSAVSAAGEAYRYVSAICIEKPDVCVKGAETFHALGERAKEGAK
VAYELLDKQLASGDKPADVADIAADAEKLAAAPVVSVEFPGKPDMLKTGTVIPLPQKRPTP
>Mature_141_residues
MWFLIKGTFWFSLVLVALSYIGSSNDPAKEPSAFDLPSAVSAAGEAYRYVSAICIEKPDVCVKGAETFHALGERAKEGAK
VAYELLDKQLASGDKPADVADIAADAEKLAAAPVVSVEFPGKPDMLKTGTVIPLPQKRPTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14952; Mature: 14952

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWFLIKGTFWFSLVLVALSYIGSSNDPAKEPSAFDLPSAVSAAGEAYRYVSAICIEKPDV
CEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
CVKGAETFHALGERAKEGAKVAYELLDKQLASGDKPADVADIAADAEKLAAAPVVSVEFP
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEECC
GKPDMLKTGTVIPLPQKRPTP
CCCCCCCCCCEEECCCCCCCC
>Mature Secondary Structure
MWFLIKGTFWFSLVLVALSYIGSSNDPAKEPSAFDLPSAVSAAGEAYRYVSAICIEKPDV
CEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
CVKGAETFHALGERAKEGAKVAYELLDKQLASGDKPADVADIAADAEKLAAAPVVSVEFP
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEECC
GKPDMLKTGTVIPLPQKRPTP
CCCCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7756693; 11481430 [H]