Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888227
Identifier: 15888227
GI number: 15888227
Start: 879932
End: 880420
Strand: Reverse
Name: 15888227
Synonym: Atu0887
Alternate gene names: NA
Gene position: 880420-879932 (Counterclockwise)
Preceding gene: 15888228
Following gene: 15888226
Centisome position: 30.98
GC content: 64.62
Gene sequence:
>489_bases ATGACCGAAGATAGCTCCCTTACACTGGAAAGACCCCCCGTCGTCATCATCCGCGGCGCGCGCAAGACCGATCTGCCCGA GCTCAACGAGATGATCACCCTGCTTGCCTCCTACCACGGCGATGCGGCGGCCATCACGCCGGCCAAGCTGGAGCGCGACC TGTTCGGCCCGCTCCCCTGGGTGCATGGGCTGGTGGCCGAAGCCGATGACGCGCTGATCGGTTACGCCCTGCTTTTGCCG CTCTACAGGGCGCAGGAAGGCCGGCGCGGCCTGGAGCTGCATCATCTCTTCGTGCGTGACGGTCATCGCGGCCATGGCAC CGGCCAGCATCTGGTGTCCCGTGCGCGGGATATCGCCAAGCGCCTTGGTTGTGACTATCTTTCCGTCAGCGCCACGACCG GCAATGTGGCGGCGCATCGTTTCTACGAAAACATGGATTTCGCGCCGCGGCCGGTCACCGGCATGCGCTACATGCAGTCC ATCGCCTGA
Upstream 100 bases:
>100_bases AGGGCGGCTCGACAGATCATATTGTCAACAAGCCGCCGTCAGGCGGCTTTGTTGTTTTCAAACGTCCTGACGGCACCGAT AAGACCAAAGGACCGAAAAA
Downstream 100 bases:
>100_bases TTAAAACCCACGGAGACGGCCATGACACGGATCGCCATTGCGCTCGCGCAGGATTTTGCGGACTGGGAACCGGCGCTGCT TGCGGCGGCAGCGCGCAGCT
Product: acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase Protein; N-Acetyltransferase; GNAT Family Acetyltransferase
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MTEDSSLTLERPPVVIIRGARKTDLPELNEMITLLASYHGDAAAITPAKLERDLFGPLPWVHGLVAEADDALIGYALLLP LYRAQEGRRGLELHHLFVRDGHRGHGTGQHLVSRARDIAKRLGCDYLSVSATTGNVAAHRFYENMDFAPRPVTGMRYMQS IA
Sequences:
>Translated_162_residues MTEDSSLTLERPPVVIIRGARKTDLPELNEMITLLASYHGDAAAITPAKLERDLFGPLPWVHGLVAEADDALIGYALLLP LYRAQEGRRGLELHHLFVRDGHRGHGTGQHLVSRARDIAKRLGCDYLSVSATTGNVAAHRFYENMDFAPRPVTGMRYMQS IA >Mature_161_residues TEDSSLTLERPPVVIIRGARKTDLPELNEMITLLASYHGDAAAITPAKLERDLFGPLPWVHGLVAEADDALIGYALLLPL YRAQEGRRGLELHHLFVRDGHRGHGTGQHLVSRARDIAKRLGCDYLSVSATTGNVAAHRFYENMDFAPRPVTGMRYMQSI A
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17928; Mature: 17797
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEDSSLTLERPPVVIIRGARKTDLPELNEMITLLASYHGDAAAITPAKLERDLFGPLPW CCCCCCEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHH VHGLVAEADDALIGYALLLPLYRAQEGRRGLELHHLFVRDGHRGHGTGQHLVSRARDIAK HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHH RLGCDYLSVSATTGNVAAHRFYENMDFAPRPVTGMRYMQSIA HHCCCEEEEECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure TEDSSLTLERPPVVIIRGARKTDLPELNEMITLLASYHGDAAAITPAKLERDLFGPLPW CCCCCEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHH VHGLVAEADDALIGYALLLPLYRAQEGRRGLELHHLFVRDGHRGHGTGQHLVSRARDIAK HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHH RLGCDYLSVSATTGNVAAHRFYENMDFAPRPVTGMRYMQSIA HHCCCEEEEECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA