Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888143
Identifier: 15888143
GI number: 15888143
Start: 795607
End: 796287
Strand: Direct
Name: 15888143
Synonym: Atu0800
Alternate gene names: NA
Gene position: 795607-796287 (Clockwise)
Preceding gene: 15888142
Following gene: 159184469
Centisome position: 28.0
GC content: 58.0
Gene sequence:
>681_bases ATGCATTTTCCCGAACTGACCATTTCCCGTCGCAGCCTTCTCGGCGGTGTTGCTCTTGCCGCCATTGCCACGGCCCTGCC GTTTGCCTTCACGCCCGGCATTGCCGAAGCGCAGGAACTGCCTGAATCCACCGGTGACGTGGATATGGCTGCGGTGATGA AGCCCGGCCCGCTGCCGGAAGCAGCGCTCGGCGATGCCAACGCACCCGTCAAGATCGTCGAATATATGTCGATGACCTGC CCGCACTGCGCCAACTTCCACAACAAGACCTTCGAAGAAATCAAGAAGAAGTACATCGATACCGGCAAGGTCTATTTCGT GCTGCGCGAATTCCCGTTCGATCCGCGCGCCGCTGCCGCCTTCATGCTGGCGCGCTGCGCGCCGGAAGGTCAGTATTTCC CCTTCGTTTCCATGCTGTTCAAACAGCAGCAGAGCTGGGCTGTCGCCCAGGATGCGCGTGCCGCCCTGCTGCAAATGTCG AAAATGGCCGGTTTCTCACAGGAGTCTTTCGAGGCCTGCTTGACGAACCAGAAACTTCTGGATGATGTGAACGCAACCAT GCAACGCGGTGCGACGGAATTCGGCGTCAACTCCACGCCGACTTTCATCATCAACGGCAAGAAATACGCAGGAGACATGT CGGTTGAAACCATGTCGGCTGTCATCGACAAGCTGCTCTGA
Upstream 100 bases:
>100_bases ATTCTTTGACAAGAAGAGTCCAGAACTCCGCTTGTGATGAACAGGCCGTCGCTATATCGGAATCAACGGACAATAGAGTC TATTACCAACAGGTGCTTTC
Downstream 100 bases:
>100_bases TCACCGAAGCCTTCAGAAAGCGGGCGGCGGATATTTCCGCACGCCCGTTTTTTATTGCCCATCTTCTTGCTGGGGTGTGA CGGCATGAAGTTCAACAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MHFPELTISRRSLLGGVALAAIATALPFAFTPGIAEAQELPESTGDVDMAAVMKPGPLPEAALGDANAPVKIVEYMSMTC PHCANFHNKTFEEIKKKYIDTGKVYFVLREFPFDPRAAAAFMLARCAPEGQYFPFVSMLFKQQQSWAVAQDARAALLQMS KMAGFSQESFEACLTNQKLLDDVNATMQRGATEFGVNSTPTFIINGKKYAGDMSVETMSAVIDKLL
Sequences:
>Translated_226_residues MHFPELTISRRSLLGGVALAAIATALPFAFTPGIAEAQELPESTGDVDMAAVMKPGPLPEAALGDANAPVKIVEYMSMTC PHCANFHNKTFEEIKKKYIDTGKVYFVLREFPFDPRAAAAFMLARCAPEGQYFPFVSMLFKQQQSWAVAQDARAALLQMS KMAGFSQESFEACLTNQKLLDDVNATMQRGATEFGVNSTPTFIINGKKYAGDMSVETMSAVIDKLL >Mature_226_residues MHFPELTISRRSLLGGVALAAIATALPFAFTPGIAEAQELPESTGDVDMAAVMKPGPLPEAALGDANAPVKIVEYMSMTC PHCANFHNKTFEEIKKKYIDTGKVYFVLREFPFDPRAAAAFMLARCAPEGQYFPFVSMLFKQQQSWAVAQDARAALLQMS KMAGFSQESFEACLTNQKLLDDVNATMQRGATEFGVNSTPTFIINGKKYAGDMSVETMSAVIDKLL
Specific function: May be required for disulfide bond formation in some proteins [H]
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR012335 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24651; Mature: 24651
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFPELTISRRSLLGGVALAAIATALPFAFTPGIAEAQELPESTGDVDMAAVMKPGPLPE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHCCCCCCCC AALGDANAPVKIVEYMSMTCPHCANFHNKTFEEIKKKYIDTGKVYFVLREFPFDPRAAAA HHCCCCCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHH FMLARCAPEGQYFPFVSMLFKQQQSWAVAQDARAALLQMSKMAGFSQESFEACLTNQKLL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH DDVNATMQRGATEFGVNSTPTFIINGKKYAGDMSVETMSAVIDKLL HHHHHHHHCCCHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHC >Mature Secondary Structure MHFPELTISRRSLLGGVALAAIATALPFAFTPGIAEAQELPESTGDVDMAAVMKPGPLPE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHCCCCCCCC AALGDANAPVKIVEYMSMTCPHCANFHNKTFEEIKKKYIDTGKVYFVLREFPFDPRAAAA HHCCCCCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHH FMLARCAPEGQYFPFVSMLFKQQQSWAVAQDARAALLQMSKMAGFSQESFEACLTNQKLL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH DDVNATMQRGATEFGVNSTPTFIINGKKYAGDMSVETMSAVIDKLL HHHHHHHHCCCHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA