Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888142
Identifier: 15888142
GI number: 15888142
Start: 794951
End: 795478
Strand: Direct
Name: 15888142
Synonym: Atu8137
Alternate gene names: NA
Gene position: 794951-795478 (Clockwise)
Preceding gene: 159184467
Following gene: 15888143
Centisome position: 27.98
GC content: 64.77
Gene sequence:
>528_bases ATGCGTTATCCCCAGAAGGGCGTTGTACAGAGGAAGGGCGTCGTCCAGATCGCCGAGGTCGCCAATGGCATCATGGACCC CGTGCTGTCGAAGCGGGCGGGCATCAACACGGCGCTGCTCGGCTCCTGGGATGAGATCGCAGGTGATGACTTTGCCGATT GCACCCGGCCGGAAAAGATCACCTGGCCGCGCCGCGACGAGGGCCCGGATCGCGGCGGTTACCAGCCCGGCGTGCTGACG ATCGCCTGCGAAGGCGCGCGCGCCCTGTTTCTCACCCATGCCCAGGGCGAACTCATCGCCCGCATCAACGGCTTTTTCGG CTTTCCGGCCGTGCGCCAGATCAGGATCGTGCAGAAGCCGGTGTCGCAGGCCATCACCCGCCGTCGCAAACCGCAGCCCC TGCGTGGTGATGCGGCAAAACGTCTCGATGACATGATGGAAGGCCTCGAGAGCGAGGCATTGCGCAAGGCGGTGGAACGG CTTGGCACGGCGGTCTTGCAGAAGAAGCCGCGTGGCCGAAGCATTTGA
Upstream 100 bases:
>100_bases ATGGTTTGCCGTTTCTGTTCGATTTGGCCTATAGTTGGGACATAAGAAGCAGGCGATCAAGAACATGTGGATTCGCCGGC TCCCAAAACGTGAGTGAAAC
Downstream 100 bases:
>100_bases TCGGTGCGGTTGTCCTTGACTGGTCACAATTCTTTGACAAGAAGAGTCCAGAACTCCGCTTGTGATGAACAGGCCGTCGC TATATCGGAATCAACGGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MRYPQKGVVQRKGVVQIAEVANGIMDPVLSKRAGINTALLGSWDEIAGDDFADCTRPEKITWPRRDEGPDRGGYQPGVLT IACEGARALFLTHAQGELIARINGFFGFPAVRQIRIVQKPVSQAITRRRKPQPLRGDAAKRLDDMMEGLESEALRKAVER LGTAVLQKKPRGRSI
Sequences:
>Translated_175_residues MRYPQKGVVQRKGVVQIAEVANGIMDPVLSKRAGINTALLGSWDEIAGDDFADCTRPEKITWPRRDEGPDRGGYQPGVLT IACEGARALFLTHAQGELIARINGFFGFPAVRQIRIVQKPVSQAITRRRKPQPLRGDAAKRLDDMMEGLESEALRKAVER LGTAVLQKKPRGRSI >Mature_175_residues MRYPQKGVVQRKGVVQIAEVANGIMDPVLSKRAGINTALLGSWDEIAGDDFADCTRPEKITWPRRDEGPDRGGYQPGVLT IACEGARALFLTHAQGELIARINGFFGFPAVRQIRIVQKPVSQAITRRRKPQPLRGDAAKRLDDMMEGLESEALRKAVER LGTAVLQKKPRGRSI
Specific function: Unknown
COG id: COG5389
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19329; Mature: 19329
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYPQKGVVQRKGVVQIAEVANGIMDPVLSKRAGINTALLGSWDEIAGDDFADCTRPEKI CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHCCCCCHHCCCCCCC TWPRRDEGPDRGGYQPGVLTIACEGARALFLTHAQGELIARINGFFGFPAVRQIRIVQKP CCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHH VSQAITRRRKPQPLRGDAAKRLDDMMEGLESEALRKAVERLGTAVLQKKPRGRSI HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRYPQKGVVQRKGVVQIAEVANGIMDPVLSKRAGINTALLGSWDEIAGDDFADCTRPEKI CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHCCCCCHHCCCCCCC TWPRRDEGPDRGGYQPGVLTIACEGARALFLTHAQGELIARINGFFGFPAVRQIRIVQKP CCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHH VSQAITRRRKPQPLRGDAAKRLDDMMEGLESEALRKAVERLGTAVLQKKPRGRSI HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA