Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15888142

Identifier: 15888142

GI number: 15888142

Start: 794951

End: 795478

Strand: Direct

Name: 15888142

Synonym: Atu8137

Alternate gene names: NA

Gene position: 794951-795478 (Clockwise)

Preceding gene: 159184467

Following gene: 15888143

Centisome position: 27.98

GC content: 64.77

Gene sequence:

>528_bases
ATGCGTTATCCCCAGAAGGGCGTTGTACAGAGGAAGGGCGTCGTCCAGATCGCCGAGGTCGCCAATGGCATCATGGACCC
CGTGCTGTCGAAGCGGGCGGGCATCAACACGGCGCTGCTCGGCTCCTGGGATGAGATCGCAGGTGATGACTTTGCCGATT
GCACCCGGCCGGAAAAGATCACCTGGCCGCGCCGCGACGAGGGCCCGGATCGCGGCGGTTACCAGCCCGGCGTGCTGACG
ATCGCCTGCGAAGGCGCGCGCGCCCTGTTTCTCACCCATGCCCAGGGCGAACTCATCGCCCGCATCAACGGCTTTTTCGG
CTTTCCGGCCGTGCGCCAGATCAGGATCGTGCAGAAGCCGGTGTCGCAGGCCATCACCCGCCGTCGCAAACCGCAGCCCC
TGCGTGGTGATGCGGCAAAACGTCTCGATGACATGATGGAAGGCCTCGAGAGCGAGGCATTGCGCAAGGCGGTGGAACGG
CTTGGCACGGCGGTCTTGCAGAAGAAGCCGCGTGGCCGAAGCATTTGA

Upstream 100 bases:

>100_bases
ATGGTTTGCCGTTTCTGTTCGATTTGGCCTATAGTTGGGACATAAGAAGCAGGCGATCAAGAACATGTGGATTCGCCGGC
TCCCAAAACGTGAGTGAAAC

Downstream 100 bases:

>100_bases
TCGGTGCGGTTGTCCTTGACTGGTCACAATTCTTTGACAAGAAGAGTCCAGAACTCCGCTTGTGATGAACAGGCCGTCGC
TATATCGGAATCAACGGACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MRYPQKGVVQRKGVVQIAEVANGIMDPVLSKRAGINTALLGSWDEIAGDDFADCTRPEKITWPRRDEGPDRGGYQPGVLT
IACEGARALFLTHAQGELIARINGFFGFPAVRQIRIVQKPVSQAITRRRKPQPLRGDAAKRLDDMMEGLESEALRKAVER
LGTAVLQKKPRGRSI

Sequences:

>Translated_175_residues
MRYPQKGVVQRKGVVQIAEVANGIMDPVLSKRAGINTALLGSWDEIAGDDFADCTRPEKITWPRRDEGPDRGGYQPGVLT
IACEGARALFLTHAQGELIARINGFFGFPAVRQIRIVQKPVSQAITRRRKPQPLRGDAAKRLDDMMEGLESEALRKAVER
LGTAVLQKKPRGRSI
>Mature_175_residues
MRYPQKGVVQRKGVVQIAEVANGIMDPVLSKRAGINTALLGSWDEIAGDDFADCTRPEKITWPRRDEGPDRGGYQPGVLT
IACEGARALFLTHAQGELIARINGFFGFPAVRQIRIVQKPVSQAITRRRKPQPLRGDAAKRLDDMMEGLESEALRKAVER
LGTAVLQKKPRGRSI

Specific function: Unknown

COG id: COG5389

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19329; Mature: 19329

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYPQKGVVQRKGVVQIAEVANGIMDPVLSKRAGINTALLGSWDEIAGDDFADCTRPEKI
CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHCCCCCHHCCCCCCC
TWPRRDEGPDRGGYQPGVLTIACEGARALFLTHAQGELIARINGFFGFPAVRQIRIVQKP
CCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHH
VSQAITRRRKPQPLRGDAAKRLDDMMEGLESEALRKAVERLGTAVLQKKPRGRSI
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRYPQKGVVQRKGVVQIAEVANGIMDPVLSKRAGINTALLGSWDEIAGDDFADCTRPEKI
CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHCCCCCHHCCCCCCC
TWPRRDEGPDRGGYQPGVLTIACEGARALFLTHAQGELIARINGFFGFPAVRQIRIVQKP
CCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHH
VSQAITRRRKPQPLRGDAAKRLDDMMEGLESEALRKAVERLGTAVLQKKPRGRSI
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA