Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888105
Identifier: 15888105
GI number: 15888105
Start: 758574
End: 758882
Strand: Direct
Name: 15888105
Synonym: Atu0762
Alternate gene names: NA
Gene position: 758574-758882 (Clockwise)
Preceding gene: 15888103
Following gene: 159184457
Centisome position: 26.7
GC content: 55.02
Gene sequence:
>309_bases ATGTTTGCTGACATGATGCCTCGGTTTGAAGAGGCCTCGCAAAAATATGCCGCTGAAAACGGAATATTCCGCGACCCGGA CTGGTACATGCTGAAGCTTCAAGAAGAAGTTGGCGAGGTGACACAGGCCTGGAACCGGCTGACGGGACGGGGGCGCATAA AGGGTAGGAGCAAAGAAGAGATGAAGCGGGATCTCGCCGACGAAACCGCCGATCTCCTCGGCCATGTGCTGTTACTGGCC CATTATAACGGTCTCGATATTGAAGGAGCGATCGAGCGCAAGTGGCGCTTTGCGCCGTCAAAACCGTGA
Upstream 100 bases:
>100_bases TGTCGCGGAAATTTCGGTTCGTGGCTGCGTGACGCCTGACAGGTCGACGCGGTCAGAGAATCATGATTAGAGTTGTAGGG CAGGAACAAAGGATGAACAA
Downstream 100 bases:
>100_bases AGGCTCCAGCTTTTCCAACATGGCCGCCACGTCGTGAAGGTCGCTTGCGACGGCAACGCACTTTTTCCGCATTTCCTCGG TCGGCGGTGCGACATCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MFADMMPRFEEASQKYAAENGIFRDPDWYMLKLQEEVGEVTQAWNRLTGRGRIKGRSKEEMKRDLADETADLLGHVLLLA HYNGLDIEGAIERKWRFAPSKP
Sequences:
>Translated_102_residues MFADMMPRFEEASQKYAAENGIFRDPDWYMLKLQEEVGEVTQAWNRLTGRGRIKGRSKEEMKRDLADETADLLGHVLLLA HYNGLDIEGAIERKWRFAPSKP >Mature_102_residues MFADMMPRFEEASQKYAAENGIFRDPDWYMLKLQEEVGEVTQAWNRLTGRGRIKGRSKEEMKRDLADETADLLGHVLLLA HYNGLDIEGAIERKWRFAPSKP
Specific function: Unknown
COG id: COG1694
COG function: function code R; Predicted pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11843; Mature: 11843
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFADMMPRFEEASQKYAAENGIFRDPDWYMLKLQEEVGEVTQAWNRLTGRGRIKGRSKEE CCCCCCHHHHHHHHHHHHHCCCCCCCCHHEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHH MKRDLADETADLLGHVLLLAHYNGLDIEGAIERKWRFAPSKP HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCC >Mature Secondary Structure MFADMMPRFEEASQKYAAENGIFRDPDWYMLKLQEEVGEVTQAWNRLTGRGRIKGRSKEE CCCCCCHHHHHHHHHHHHHCCCCCCCCHHEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHH MKRDLADETADLLGHVLLLAHYNGLDIEGAIERKWRFAPSKP HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA