Click here to switch to the map view.

The map label for this gene is mmgC [H]

Identifier: 15888075

GI number: 15888075

Start: 731156

End: 732940

Strand: Direct

Name: mmgC [H]

Synonym: Atu0732

Alternate gene names: 15888075

Gene position: 731156-732940 (Clockwise)

Preceding gene: 159184442

Following gene: 159184444

Centisome position: 25.73

GC content: 62.97

Gene sequence:

>1785_bases
ATGTATAGCGCGCCGGTGGATGATATCGCCTTTACACTCAAGCATGTGGCGGGTCTTGAAGACGCGCTCTCACAGGGTGT
GCTGGGAGACCTGAGCGAAGATCTCGTTGATGCCATTCTTGAGGAAGCCGGCCGTTTCGCCACCGGAGAGGTAGCCCCGC
TCGCCGATATTGGCGACCGTCAGGGCGCGAAGCTCGCAGACGGCAAGGTCACGACGCCGGATGGCTGGGCCGATCTTTAC
CGCCGCTGGGCGGAAGCGGGCTGGAACAGCCTGACCGCGCCCGAAGAATTCGGCGGCCAGAACCTGCCGCACATGCTGAA
TGTCGCGGCACTCGAAATGTGGAATTCCGGCTCCATGGCCTTTGCGCTGGCGCCGACGCTCACCATGGGCGCGGTGGAAG
CCATCGTTACCCACGGCAGCAATGATCTGAAGCGCATCTATCTGCCGAAACTCGTATCCGGCGAGTGGACCGGCACCATG
AACCTCACCGAACCCCATGCGGGATCGGACCTGGGCGTGTTGAAGACCCGGGCGGAGCGTAATGGTGACGGCACCTACCG
CATCTTCGGCCAGAAGATTTTCATCACCTGGGGCGAACACGACGCGGCGGATAATATCATCCACCTCGTTCTCGCCCGTC
TGCCGGATGCGCCGACCGGTACGCGCGGCATCTCGCTGTTCCTGGTGCCGAAATTCCTGCCCGATGAAAACGGCGCACCG
GGCAGCCGCAACGACCTGTTCTGCCATTCGCTGGAGCACAAGCTCGGCATTCACGGCTCACCCACCTGCACGATGATCTT
CGGCGACGGCAAATTCGGTGACGAAAAGGGCGCTCTCGGCTGGCTGATCGGCGAGGAAAACAAGGGCCTCGCCTGCATGT
TCACCATGATGAACAACGCCCGCCTTGCGGTCGGCATGCAGGGCGTGGCGATCTGCGAAGCGGCGACCCAGAAGGCGATC
GAATACGCGAAAGAGCGCACGCAGGGCAAGGCGCCCGGCTGGCAGGGTTCCGGCATGAGCCCGATCATCGAACATCCTGA
CATCGCCAGGACGCTTCTGACCATGAAGGCGCTGACGCAAGGATCGCGGGCGATTTCCTTCAGCTGCGCCCATGCCATCG
ACATGGCGCATGCGACCGAAGACGCCTCCCAGCGCGCTCACTGGCAGGAACGAGCTGCCCTTTTGACACCGATTGCCAAA
TCCTTCTCCACCGATGCCGGTGTCGATGTCGCCTCCATGGGCATTCAGGTGCATGGCGGCATGGGCTTCATCGAGGAGAC
AGGTGCTGCGCGTTATCTGCGCGATGCCCGTATCGCGCCGATCTACGAGGGTACCAACGGCATTCAGGCCATCGATCTGG
TGCTGCGCAAGCTGCCGCTCTCCGAGGGCGCGCAGGTGCGCGGTTTCATCGCTGAGCTGCGTGAGATTGCCGCCCGGACG
GCCGCGTCTAACCGCGATGATCTTGGCGAGACCGCCCGTTATCTTGAAGCCAGCCTCAACGATCTGGAAACGACGACCGA
CTGGTTGCTCTCCCGCATCAAGGCGGGCGAAACCGAAACCGCGCTTGCTGGTGCCACGGCCTATCAGCGGCTCTTCGGTC
TGGCGCTCACCGGTGCCTATCTCGCCAAGGGCGCATTGGTCTCCGTCGATGATGGCCGGAGCGGGCATCGCGCAGCACTT
TGCCGGTTCACGGCGGAAAACCTGCTGGCGGAAACGGCGGCGCTGAAGGATCGCGTTATATCAGGGGCGGCAAGCCTTGC
CGCCGCCCGCACCCTGTTGGCTTGA

Upstream 100 bases:

>100_bases
AAACCTGTCGAAATCGTGGGAATTTTCAAATTGACGTTTACGTAAAAATCATTTAGCCCGAGGGCATTAGCAAGATGCAA
GAGCTTCGGGAGGAGGCAGC

Downstream 100 bases:

>100_bases
GGAGTTTCAGATGTCGGACGATCATATTCTTGTTGAGCCGGTTGGTCATGCGCCTGAGGTTGTGACCATCCGCTTCAACC
GGCCGGAGAAGAAAAATGCC

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 594; Mature: 594

Protein sequence:

>594_residues
MYSAPVDDIAFTLKHVAGLEDALSQGVLGDLSEDLVDAILEEAGRFATGEVAPLADIGDRQGAKLADGKVTTPDGWADLY
RRWAEAGWNSLTAPEEFGGQNLPHMLNVAALEMWNSGSMAFALAPTLTMGAVEAIVTHGSNDLKRIYLPKLVSGEWTGTM
NLTEPHAGSDLGVLKTRAERNGDGTYRIFGQKIFITWGEHDAADNIIHLVLARLPDAPTGTRGISLFLVPKFLPDENGAP
GSRNDLFCHSLEHKLGIHGSPTCTMIFGDGKFGDEKGALGWLIGEENKGLACMFTMMNNARLAVGMQGVAICEAATQKAI
EYAKERTQGKAPGWQGSGMSPIIEHPDIARTLLTMKALTQGSRAISFSCAHAIDMAHATEDASQRAHWQERAALLTPIAK
SFSTDAGVDVASMGIQVHGGMGFIEETGAARYLRDARIAPIYEGTNGIQAIDLVLRKLPLSEGAQVRGFIAELREIAART
AASNRDDLGETARYLEASLNDLETTTDWLLSRIKAGETETALAGATAYQRLFGLALTGAYLAKGALVSVDDGRSGHRAAL
CRFTAENLLAETAALKDRVISGAASLAAARTLLA

Sequences:

>Translated_594_residues
MYSAPVDDIAFTLKHVAGLEDALSQGVLGDLSEDLVDAILEEAGRFATGEVAPLADIGDRQGAKLADGKVTTPDGWADLY
RRWAEAGWNSLTAPEEFGGQNLPHMLNVAALEMWNSGSMAFALAPTLTMGAVEAIVTHGSNDLKRIYLPKLVSGEWTGTM
NLTEPHAGSDLGVLKTRAERNGDGTYRIFGQKIFITWGEHDAADNIIHLVLARLPDAPTGTRGISLFLVPKFLPDENGAP
GSRNDLFCHSLEHKLGIHGSPTCTMIFGDGKFGDEKGALGWLIGEENKGLACMFTMMNNARLAVGMQGVAICEAATQKAI
EYAKERTQGKAPGWQGSGMSPIIEHPDIARTLLTMKALTQGSRAISFSCAHAIDMAHATEDASQRAHWQERAALLTPIAK
SFSTDAGVDVASMGIQVHGGMGFIEETGAARYLRDARIAPIYEGTNGIQAIDLVLRKLPLSEGAQVRGFIAELREIAART
AASNRDDLGETARYLEASLNDLETTTDWLLSRIKAGETETALAGATAYQRLFGLALTGAYLAKGALVSVDDGRSGHRAAL
CRFTAENLLAETAALKDRVISGAASLAAARTLLA
>Mature_594_residues
MYSAPVDDIAFTLKHVAGLEDALSQGVLGDLSEDLVDAILEEAGRFATGEVAPLADIGDRQGAKLADGKVTTPDGWADLY
RRWAEAGWNSLTAPEEFGGQNLPHMLNVAALEMWNSGSMAFALAPTLTMGAVEAIVTHGSNDLKRIYLPKLVSGEWTGTM
NLTEPHAGSDLGVLKTRAERNGDGTYRIFGQKIFITWGEHDAADNIIHLVLARLPDAPTGTRGISLFLVPKFLPDENGAP
GSRNDLFCHSLEHKLGIHGSPTCTMIFGDGKFGDEKGALGWLIGEENKGLACMFTMMNNARLAVGMQGVAICEAATQKAI
EYAKERTQGKAPGWQGSGMSPIIEHPDIARTLLTMKALTQGSRAISFSCAHAIDMAHATEDASQRAHWQERAALLTPIAK
SFSTDAGVDVASMGIQVHGGMGFIEETGAARYLRDARIAPIYEGTNGIQAIDLVLRKLPLSEGAQVRGFIAELREIAART
AASNRDDLGETARYLEASLNDLETTTDWLLSRIKAGETETALAGATAYQRLFGLALTGAYLAKGALVSVDDGRSGHRAAL
CRFTAENLLAETAALKDRVISGAASLAAARTLLA

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=377, Percent_Identity=28.6472148541114, Blast_Score=122, Evalue=1e-27,
Organism=Homo sapiens, GI226958414, Length=377, Percent_Identity=28.6472148541114, Blast_Score=122, Evalue=1e-27,
Organism=Homo sapiens, GI4557233, Length=377, Percent_Identity=29.4429708222812, Blast_Score=115, Evalue=2e-25,
Organism=Homo sapiens, GI4501857, Length=451, Percent_Identity=26.3858093126386, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI4501859, Length=408, Percent_Identity=25, Blast_Score=106, Evalue=6e-23,
Organism=Homo sapiens, GI21361497, Length=436, Percent_Identity=26.605504587156, Blast_Score=104, Evalue=3e-22,
Organism=Homo sapiens, GI4557235, Length=401, Percent_Identity=28.428927680798, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI76496475, Length=401, Percent_Identity=28.428927680798, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI187960098, Length=417, Percent_Identity=27.8177458033573, Blast_Score=96, Evalue=8e-20,
Organism=Homo sapiens, GI4557231, Length=417, Percent_Identity=27.8177458033573, Blast_Score=96, Evalue=8e-20,
Organism=Homo sapiens, GI7656849, Length=382, Percent_Identity=24.869109947644, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI4503943, Length=346, Percent_Identity=26.878612716763, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI87082384, Length=299, Percent_Identity=32.7759197324415, Blast_Score=124, Evalue=2e-29,
Organism=Escherichia coli, GI87081958, Length=376, Percent_Identity=27.3936170212766, Blast_Score=80, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17538396, Length=419, Percent_Identity=28.6396181384248, Blast_Score=133, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI86563383, Length=541, Percent_Identity=26.4325323475046, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI86563381, Length=541, Percent_Identity=26.4325323475046, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI71985184, Length=396, Percent_Identity=28.5353535353535, Blast_Score=108, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI17533517, Length=424, Percent_Identity=26.6509433962264, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17508101, Length=371, Percent_Identity=27.4932614555256, Blast_Score=100, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17506239, Length=368, Percent_Identity=26.6304347826087, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17569725, Length=394, Percent_Identity=26.6497461928934, Blast_Score=95, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17570075, Length=450, Percent_Identity=24.8888888888889, Blast_Score=93, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17534899, Length=369, Percent_Identity=28.1842818428184, Blast_Score=92, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI32563615, Length=237, Percent_Identity=27.8481012658228, Blast_Score=75, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI71985192, Length=275, Percent_Identity=28, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71990804, Length=245, Percent_Identity=27.3469387755102, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI21356377, Length=374, Percent_Identity=28.3422459893048, Blast_Score=120, Evalue=3e-27,
Organism=Drosophila melanogaster, GI21355753, Length=417, Percent_Identity=28.0575539568345, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24646207, Length=449, Percent_Identity=28.0623608017817, Blast_Score=115, Evalue=8e-26,
Organism=Drosophila melanogaster, GI281363737, Length=431, Percent_Identity=25.9860788863109, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24666513, Length=367, Percent_Identity=26.9754768392371, Blast_Score=100, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24660351, Length=424, Percent_Identity=26.8867924528302, Blast_Score=97, Evalue=4e-20,
Organism=Drosophila melanogaster, GI19920834, Length=335, Percent_Identity=25.6716417910448, Blast_Score=72, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 63256; Mature: 63256

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSAPVDDIAFTLKHVAGLEDALSQGVLGDLSEDLVDAILEEAGRFATGEVAPLADIGDR
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCC
QGAKLADGKVTTPDGWADLYRRWAEAGWNSLTAPEEFGGQNLPHMLNVAALEMWNSGSMA
CCCEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHCCCCCCCHHHHHHHHHHCCCCCEE
FALAPTLTMGAVEAIVTHGSNDLKRIYLPKLVSGEWTGTMNLTEPHAGSDLGVLKTRAER
EEECCHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCCEEECCCCCCCCCCCHHHHHHHCC
NGDGTYRIFGQKIFITWGEHDAADNIIHLVLARLPDAPTGTRGISLFLVPKFLPDENGAP
CCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCC
GSRNDLFCHSLEHKLGIHGSPTCTMIFGDGKFGDEKGALGWLIGEENKGLACMFTMMNNA
CCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEECCCC
RLAVGMQGVAICEAATQKAIEYAKERTQGKAPGWQGSGMSPIIEHPDIARTLLTMKALTQ
EEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
GSRAISFSCAHAIDMAHATEDASQRAHWQERAALLTPIAKSFSTDAGVDVASMGIQVHGG
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEEEECC
MGFIEETGAARYLRDARIAPIYEGTNGIQAIDLVLRKLPLSEGAQVRGFIAELREIAART
CCCHHHCCHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
AASNRDDLGETARYLEASLNDLETTTDWLLSRIKAGETETALAGATAYQRLFGLALTGAY
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LAKGALVSVDDGRSGHRAALCRFTAENLLAETAALKDRVISGAASLAAARTLLA
HHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYSAPVDDIAFTLKHVAGLEDALSQGVLGDLSEDLVDAILEEAGRFATGEVAPLADIGDR
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCC
QGAKLADGKVTTPDGWADLYRRWAEAGWNSLTAPEEFGGQNLPHMLNVAALEMWNSGSMA
CCCEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHCCCCCCCHHHHHHHHHHCCCCCEE
FALAPTLTMGAVEAIVTHGSNDLKRIYLPKLVSGEWTGTMNLTEPHAGSDLGVLKTRAER
EEECCHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCCEEECCCCCCCCCCCHHHHHHHCC
NGDGTYRIFGQKIFITWGEHDAADNIIHLVLARLPDAPTGTRGISLFLVPKFLPDENGAP
CCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCC
GSRNDLFCHSLEHKLGIHGSPTCTMIFGDGKFGDEKGALGWLIGEENKGLACMFTMMNNA
CCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEECCCC
RLAVGMQGVAICEAATQKAIEYAKERTQGKAPGWQGSGMSPIIEHPDIARTLLTMKALTQ
EEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
GSRAISFSCAHAIDMAHATEDASQRAHWQERAALLTPIAKSFSTDAGVDVASMGIQVHGG
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEEEECC
MGFIEETGAARYLRDARIAPIYEGTNGIQAIDLVLRKLPLSEGAQVRGFIAELREIAART
CCCHHHCCHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
AASNRDDLGETARYLEASLNDLETTTDWLLSRIKAGETETALAGATAYQRLFGLALTGAY
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LAKGALVSVDDGRSGHRAALCRFTAENLLAETAALKDRVISGAASLAAARTLLA
HHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]