Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184442
Identifier: 159184442
GI number: 159184442
Start: 729366
End: 729890
Strand: Direct
Name: 159184442
Synonym: Atu0730
Alternate gene names: NA
Gene position: 729366-729890 (Clockwise)
Preceding gene: 15888072
Following gene: 15888075
Centisome position: 25.67
GC content: 59.43
Gene sequence:
>525_bases ATGAAAAGCTATATCAAGAATATCATGGCTGTCGGTCTTTCTGCGATCGTGGTTGCGGGAGCGATTGTTCCGGCAGAAGC CGCAATGCCATTGCCGGCCGCGCCGAAGAGTGTTGAGACCGCAGGCAATGATGCCAGCAACAATGTCGTGAATGTTCAAT ACTGGCGCGACCGCGGTGGTCGTGGCGACTGGGGCGACCGTCGCGGCTGGTATGGCGGCCATCGCGGTTATCGTGATTAC CGCCCGGGCTATCGTCATCATGACGGCTACTGGTTCCCGCTCGCAGCCTTTGCGACGGGTGCGATCATCGGTGGCGCTCT CTCGCAGCCACGTGAAGTCTATCGCCCGGTTCCGGAATATCGTCCGCGTCCCGTGTATCGCGAATACCGCCCAGTCCGCC GTGGGGGTATGAGCCAGGCGCATGTGAACTGGTGCTATGGCCGCTATCGTTCCTACGATGCCTATAGCAACACGTTCCAA CCTTATAACGGCCCGCGCCAGCAGTGCTATTCGCCATACGGCTGA
Upstream 100 bases:
>100_bases GGAATGTCCAGCCAGACTGAAAAACTGGCCGAATGAGAAGAAAAAAGTGTTATTATTCACGGAGAACGGCCTGTTGACCG TCGTGAATGGAGGAAGTCAG
Downstream 100 bases:
>100_bases TAGACATAACAGGCTGAGATCGACAGAGCCGTCCGGTCACCACCGGACGGCTTTTTGCTGTCACAAGATACGCGCGCGCT TCAGCACGAACCAGGCAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MKSYIKNIMAVGLSAIVVAGAIVPAEAAMPLPAAPKSVETAGNDASNNVVNVQYWRDRGGRGDWGDRRGWYGGHRGYRDY RPGYRHHDGYWFPLAAFATGAIIGGALSQPREVYRPVPEYRPRPVYREYRPVRRGGMSQAHVNWCYGRYRSYDAYSNTFQ PYNGPRQQCYSPYG
Sequences:
>Translated_174_residues MKSYIKNIMAVGLSAIVVAGAIVPAEAAMPLPAAPKSVETAGNDASNNVVNVQYWRDRGGRGDWGDRRGWYGGHRGYRDY RPGYRHHDGYWFPLAAFATGAIIGGALSQPREVYRPVPEYRPRPVYREYRPVRRGGMSQAHVNWCYGRYRSYDAYSNTFQ PYNGPRQQCYSPYG >Mature_174_residues MKSYIKNIMAVGLSAIVVAGAIVPAEAAMPLPAAPKSVETAGNDASNNVVNVQYWRDRGGRGDWGDRRGWYGGHRGYRDY RPGYRHHDGYWFPLAAFATGAIIGGALSQPREVYRPVPEYRPRPVYREYRPVRRGGMSQAHVNWCYGRYRSYDAYSNTFQ PYNGPRQQCYSPYG
Specific function: Has immunoglobulin-binding and hemagglutination properties, and can bind to mannose. Essential for virulence. May be involved in LPS biosynthesis or polysaccharide transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BA14k family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012413 [H]
Pfam domain/function: PF07886 BA14K [H]
EC number: NA
Molecular weight: Translated: 19690; Mature: 19690
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSYIKNIMAVGLSAIVVAGAIVPAEAAMPLPAAPKSVETAGNDASNNVVNVQYWRDRGG CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEEEECCCCC RGDWGDRRGWYGGHRGYRDYRPGYRHHDGYWFPLAAFATGAIIGGALSQPREVYRPVPEY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHCCCCCC RPRPVYREYRPVRRGGMSQAHVNWCYGRYRSYDAYSNTFQPYNGPRQQCYSPYG CCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCC >Mature Secondary Structure MKSYIKNIMAVGLSAIVVAGAIVPAEAAMPLPAAPKSVETAGNDASNNVVNVQYWRDRGG CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEEEECCCCC RGDWGDRRGWYGGHRGYRDYRPGYRHHDGYWFPLAAFATGAIIGGALSQPREVYRPVPEY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHCCCCCC RPRPVYREYRPVRRGGMSQAHVNWCYGRYRSYDAYSNTFQPYNGPRQQCYSPYG CCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA