Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is kup1
Identifier: 15888055
GI number: 15888055
Start: 711743
End: 713662
Strand: Direct
Name: kup1
Synonym: Atu0711
Alternate gene names: 15888055
Gene position: 711743-713662 (Clockwise)
Preceding gene: 15888054
Following gene: 159184431
Centisome position: 25.05
GC content: 59.17
Gene sequence:
>1920_bases ATGTCTCAAATCGCAGACAAGGACGTTGCCGAGAAACCGGATGCCGATGACTCGCACAAGAACAAGGGGCTTTATGCTGC CATCCTTGGTTCCATCGGGGTCGTTTACGGTGATATCGGCACCAGTCCGCTTTATGCCTTTCGCGAAGCCCTGAAGCCGA TCGCCTATGATGGCGTGACGCGGGAGGAGGTCATTGGTCTCACATCGCTGATGATCTGGTCGCTGACGATCATCGTGACC TTCAAATATATCACGCTTCTGCTGCGTGCCGACAATGACGGCGAAGGCGGCACGCTGTCGCTTCTGGCGCTGCTTATGAA GACGGCGGGCACGCATCGCAGCGTTCTCATCGTGCTCGGTCTCATCGGCGCCGCCCTGTTCCTGGGTGACGCGATGATCA CGCCGGCGCTATCGGTGCTTTCGGCGGTGGAAGGTCTGAAGCTCGTCACGCCTGCCATGGACGACTTCATCATTCCGATA TCCGTCTGCATCCTCATCGGCCTCTTCGCAATCCAGTCGCATGGCACCGGCACGGTGGCGAAGTTCTTCGGCCCGATCAC GGCGGTCTGGTTTCTCGTGATGGGCGGGGCCGGCCTTATTCATATAGCCGATGATTTCGGCATTCTTTTTGCCTTCAATC CCTGGCATGCGGTGGAGTTTCTGGCCAATGAAGGCTTTTACGGCGTCGTCGTGCTCGGTGCGGTCTTCCTGACGATAACA GGTGCTGAAGCACTTTATGCAGACCTTGGCCATTTCGGCCGCCGCCCCATCCAGTGGGCGTGGTTCTGTCTGGTTTTCCC GGCTTTGACGCTGAATTATCTCGGGCAGGGCGCGCTGGTCCTGAAAGACCCGGCAGCCATGTCCAATCCGTTCTACCTGA TGTTCCCGCAATGGGCGATCCTGCCGGCCGTCATTCTGGCGACCGCCGCTACCATCATCGCCAGCCAGGCGGTGATAACA GGCGCGTTTTCGCTGGTTCGTCAGGCGATCCATCTTGGCTACCTGCCGCGTATGGAAATCCTCTTCACCTCGGAAACCAA TACCGGGCAGATCTATCTGCCGGCCGTCAATACCATCCTTTTGTTCGGCGTCGTGGCACTGGTGCTCACCTTCAAAAGTT CGGATGCGCTGGCCACCGCCTACGGTATCTCGGTTACCGGCGCGATGGTCGTCACCAGCCTGATGTTCTTCGAATTCGTG CGCAAACGCTGGCAATGGTCGATTTGGCTGGCGCTTGCTGTGCTGACCCCGCTTCTGCTGCTGGAGCTGATCTTCCTTGG CGCGAACCTGCTCAAGATCCACGATGGTGGTTACGTGCCGGTGCTGCTGGCGATCGCCTTCACCGTCATCATGACCACTT GGCAGCGCGGCTCGAGAATCCTTTTCGCCAAGACCCGCCGCGGGGATGTGCCGCTGAAGGCCTTCGTCGCTTCGGTGGAA AAAGAAAGCGCCCATGCGCCGGTGCGTGTGCCCGGCACCGCGATTTTCCTCACCGGCGATCCGGAGGCAGCACCGGCGGC ATTGTTGCACAATCTCAAGCATAACCATGTCCTGCACGACAAGAACGTCATCCTGACGATCCGCACCGAGGACCAGCCGC GCGTTCGTCCGGAGGACAGATACACGCTGACGAAACTCAGCGATCGTTTTGCCGTGGTCGAGCTGCATTTCGGCTTCATG GAAACCCAGAACGTTACACAGGCGCTGGGCTATCTGAGACGCACCGGCTACAAGTTCGACATCATGTCGACCTCGTTTTA CCTCGGCCGCCGCAAGCTGGTGCCGGATCCGAAATCCGGCATGCCGGGCTGGCAGAACCGTCTGTTCATCGCGCTTGCCG AAACCGCTGCCGATCCCTCCGACTATTTCCGCCTGCCTGCAAACCGTGTGGTGGAACTCGGCTCTCACGTCGTCGTCTGA
Upstream 100 bases:
>100_bases ATTTGGTTATCCCCTTGCGCTGGTCGTCATGCTGATGTCCGCCATCATCCCGTTTCTCTTTTTCCGCTGGAAGGGCTGGC TCTGAAGAGCCAGGATCATC
Downstream 100 bases:
>100_bases TGGAGCCATCCGGCGGCGCGCCGGTTCCTGTTTTCTCCGTCATGCCGGCCTCGAGACGGTATCCGGCCGGCCCAAGTCCT TGGGCTGAAGGGAGTCTTCC
Product: potassium uptake protein
Products: K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 639; Mature: 638
Protein sequence:
>639_residues MSQIADKDVAEKPDADDSHKNKGLYAAILGSIGVVYGDIGTSPLYAFREALKPIAYDGVTREEVIGLTSLMIWSLTIIVT FKYITLLLRADNDGEGGTLSLLALLMKTAGTHRSVLIVLGLIGAALFLGDAMITPALSVLSAVEGLKLVTPAMDDFIIPI SVCILIGLFAIQSHGTGTVAKFFGPITAVWFLVMGGAGLIHIADDFGILFAFNPWHAVEFLANEGFYGVVVLGAVFLTIT GAEALYADLGHFGRRPIQWAWFCLVFPALTLNYLGQGALVLKDPAAMSNPFYLMFPQWAILPAVILATAATIIASQAVIT GAFSLVRQAIHLGYLPRMEILFTSETNTGQIYLPAVNTILLFGVVALVLTFKSSDALATAYGISVTGAMVVTSLMFFEFV RKRWQWSIWLALAVLTPLLLLELIFLGANLLKIHDGGYVPVLLAIAFTVIMTTWQRGSRILFAKTRRGDVPLKAFVASVE KESAHAPVRVPGTAIFLTGDPEAAPAALLHNLKHNHVLHDKNVILTIRTEDQPRVRPEDRYTLTKLSDRFAVVELHFGFM ETQNVTQALGYLRRTGYKFDIMSTSFYLGRRKLVPDPKSGMPGWQNRLFIALAETAADPSDYFRLPANRVVELGSHVVV
Sequences:
>Translated_639_residues MSQIADKDVAEKPDADDSHKNKGLYAAILGSIGVVYGDIGTSPLYAFREALKPIAYDGVTREEVIGLTSLMIWSLTIIVT FKYITLLLRADNDGEGGTLSLLALLMKTAGTHRSVLIVLGLIGAALFLGDAMITPALSVLSAVEGLKLVTPAMDDFIIPI SVCILIGLFAIQSHGTGTVAKFFGPITAVWFLVMGGAGLIHIADDFGILFAFNPWHAVEFLANEGFYGVVVLGAVFLTIT GAEALYADLGHFGRRPIQWAWFCLVFPALTLNYLGQGALVLKDPAAMSNPFYLMFPQWAILPAVILATAATIIASQAVIT GAFSLVRQAIHLGYLPRMEILFTSETNTGQIYLPAVNTILLFGVVALVLTFKSSDALATAYGISVTGAMVVTSLMFFEFV RKRWQWSIWLALAVLTPLLLLELIFLGANLLKIHDGGYVPVLLAIAFTVIMTTWQRGSRILFAKTRRGDVPLKAFVASVE KESAHAPVRVPGTAIFLTGDPEAAPAALLHNLKHNHVLHDKNVILTIRTEDQPRVRPEDRYTLTKLSDRFAVVELHFGFM ETQNVTQALGYLRRTGYKFDIMSTSFYLGRRKLVPDPKSGMPGWQNRLFIALAETAADPSDYFRLPANRVVELGSHVVV >Mature_638_residues SQIADKDVAEKPDADDSHKNKGLYAAILGSIGVVYGDIGTSPLYAFREALKPIAYDGVTREEVIGLTSLMIWSLTIIVTF KYITLLLRADNDGEGGTLSLLALLMKTAGTHRSVLIVLGLIGAALFLGDAMITPALSVLSAVEGLKLVTPAMDDFIIPIS VCILIGLFAIQSHGTGTVAKFFGPITAVWFLVMGGAGLIHIADDFGILFAFNPWHAVEFLANEGFYGVVVLGAVFLTITG AEALYADLGHFGRRPIQWAWFCLVFPALTLNYLGQGALVLKDPAAMSNPFYLMFPQWAILPAVILATAATIIASQAVITG AFSLVRQAIHLGYLPRMEILFTSETNTGQIYLPAVNTILLFGVVALVLTFKSSDALATAYGISVTGAMVVTSLMFFEFVR KRWQWSIWLALAVLTPLLLLELIFLGANLLKIHDGGYVPVLLAIAFTVIMTTWQRGSRILFAKTRRGDVPLKAFVASVEK ESAHAPVRVPGTAIFLTGDPEAAPAALLHNLKHNHVLHDKNVILTIRTEDQPRVRPEDRYTLTKLSDRFAVVELHFGFME TQNVTQALGYLRRTGYKFDIMSTSFYLGRRKLVPDPKSGMPGWQNRLFIALAETAADPSDYFRLPANRVVELGSHVVV
Specific function: Transport of potassium into the cell
COG id: COG3158
COG function: function code P; K+ transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAK/KUP transporter (TC 2.A.72) family
Homologues:
Organism=Escherichia coli, GI48994960, Length=622, Percent_Identity=44.5337620578778, Blast_Score=536, Evalue=1e-153,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KUP1_AGRT5 (Q8UHH1)
Other databases:
- EMBL: AE007869 - PIR: AI2663 - PIR: H97445 - RefSeq: NP_353736.1 - STRING: Q8UHH1 - GeneID: 1132749 - GenomeReviews: AE007869_GR - KEGG: atu:Atu0711 - eggNOG: COG3158 - HOGENOM: HBG351154 - OMA: SDYFRLP - PhylomeDB: Q8UHH1 - ProtClustDB: CLSK800194 - BioCyc: ATUM176299-1:ATU0711-MONOMER - HAMAP: MF_01522 - InterPro: IPR003855 - InterPro: IPR023051
Pfam domain/function: PF02705 K_trans
EC number: NA
Molecular weight: Translated: 69655; Mature: 69523
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xb88b218)-; HASH(0xd2c8fb4)-; HASH(0xd3a6810)-; HASH(0x404ff128)-; HASH(0xd178ee4)-; HASH(0xd3a37c8)-; HASH(0xcf00444)-; HASH(0xd2a118c)-; HASH(0xcb0d05c)-; HASH(0xd178e9c)-; HASH(0xd8a71e0)-; HASH(0xce3f644)-;
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQIADKDVAEKPDADDSHKNKGLYAAILGSIGVVYGDIGTSPLYAFREALKPIAYDGVT CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCCCHHHHHHHHHCHHHCCCCC REEVIGLTSLMIWSLTIIVTFKYITLLLRADNDGEGGTLSLLALLMKTAGTHRSVLIVLG HHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHH LIGAALFLGDAMITPALSVLSAVEGLKLVTPAMDDFIIPISVCILIGLFAIQSHGTGTVA HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH KFFGPITAVWFLVMGGAGLIHIADDFGILFAFNPWHAVEFLANEGFYGVVVLGAVFLTIT HHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHC GAEALYADLGHFGRRPIQWAWFCLVFPALTLNYLGQGALVLKDPAAMSNPFYLMFPQWAI CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCCHHH LPAVILATAATIIASQAVITGAFSLVRQAIHLGYLPRMEILFTSETNTGQIYLPAVNTIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECHHHHHH LFGVVALVLTFKSSDALATAYGISVTGAMVVTSLMFFEFVRKRWQWSIWLALAVLTPLLL HHHHHHHHHHCCCCCCEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LELIFLGANLLKIHDGGYVPVLLAIAFTVIMTTWQRGSRILFAKTRRGDVPLKAFVASVE HHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHH KESAHAPVRVPGTAIFLTGDPEAAPAALLHNLKHNHVLHDKNVILTIRTEDQPRVRPEDR HCCCCCCEECCCEEEEEECCCCCHHHHHHHHCCCCCEEECCCEEEEEEECCCCCCCCCCC YTLTKLSDRFAVVELHFGFMETQNVTQALGYLRRTGYKFDIMSTSFYLGRRKLVPDPKSG EEHEECCCCEEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEECCHHECCCCCCCCCCCCC MPGWQNRLFIALAETAADPSDYFRLPANRVVELGSHVVV CCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHCCCCCCH >Mature Secondary Structure SQIADKDVAEKPDADDSHKNKGLYAAILGSIGVVYGDIGTSPLYAFREALKPIAYDGVT CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCCCHHHHHHHHHCHHHCCCCC REEVIGLTSLMIWSLTIIVTFKYITLLLRADNDGEGGTLSLLALLMKTAGTHRSVLIVLG HHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHH LIGAALFLGDAMITPALSVLSAVEGLKLVTPAMDDFIIPISVCILIGLFAIQSHGTGTVA HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH KFFGPITAVWFLVMGGAGLIHIADDFGILFAFNPWHAVEFLANEGFYGVVVLGAVFLTIT HHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHC GAEALYADLGHFGRRPIQWAWFCLVFPALTLNYLGQGALVLKDPAAMSNPFYLMFPQWAI CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCCHHH LPAVILATAATIIASQAVITGAFSLVRQAIHLGYLPRMEILFTSETNTGQIYLPAVNTIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECHHHHHH LFGVVALVLTFKSSDALATAYGISVTGAMVVTSLMFFEFVRKRWQWSIWLALAVLTPLLL HHHHHHHHHHCCCCCCEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LELIFLGANLLKIHDGGYVPVLLAIAFTVIMTTWQRGSRILFAKTRRGDVPLKAFVASVE HHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHH KESAHAPVRVPGTAIFLTGDPEAAPAALLHNLKHNHVLHDKNVILTIRTEDQPRVRPEDR HCCCCCCEECCCEEEEEECCCCCHHHHHHHHCCCCCEEECCCEEEEEEECCCCCCCCCCC YTLTKLSDRFAVVELHFGFMETQNVTQALGYLRRTGYKFDIMSTSFYLGRRKLVPDPKSG EEHEECCCCEEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEECCHHECCCCCCCCCCCCC MPGWQNRLFIALAETAADPSDYFRLPANRVVELGSHVVV CCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194