Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is aglE [H]
Identifier: 15887936
GI number: 15887936
Start: 574504
End: 575865
Strand: Direct
Name: aglE [H]
Synonym: Atu0591
Alternate gene names: 15887936
Gene position: 574504-575865 (Clockwise)
Preceding gene: 159184377
Following gene: 159184379
Centisome position: 20.22
GC content: 59.54
Gene sequence:
>1362_bases ATGCGGAAGACTCTTTTGGCGACGGCGGCCTCTATGGTGCTGCTGTCGGGTTCGGTCTTTGCTGCCGATCTGAAATTCGC ACCCGGCGCAGATGCCAAGTTCAACTGGAAAAGCTACGAGGACTTCAAGGCGGCCCATGCCGACCTGAAAGGCCAGACGC TGACGATTTTCGGGCCCTGGCGTGGCGAGGACGAGGCGCTATTCCAGTCGGTGCTCGCCTATTTCGCCGATGCGACGGGC GTGAATGTCCGTTATTCTTCATCGGAAAATTACGAGCAGCAGATCGTCATCGATACGCAGGCCGGTTCCCCGCCCAATAT CGCCATCCTGCCGCAGCCCGGCCTTCTGGCCGATCTCGCCGCCAAGGGTTTCCTTGTGCCGCTAGGCGACGACACTGCCA AATGGGTTGAGGAAAATTACGGCGCTGGCAAATCCTGGGTCGATCTCGGCAGCTACAAGGGCAAGGACGGCAACAAGGCC TATTTCGCTTTCCCCTTTAAGGCCGACGTGAAGTCGCTCGTCTGGTATGTGCCTGAGAACTTCGAGGAAGCGGGCTACAA GGTGCCCGAGAGCATGGAAGATCTGCTCAAGCTGACGGACCAGATCGTCGCCGATGGCGGCACGCCGTGGTGCATCGGTC TTGGCTCCGGCGGCGCGACCGGCTGGCCGGCAACCGACTGGGTGGAAGACCTGATGCTGCGCACGCAGCCGCTTGATGTC TACCAGAAGTGGACGACCAACGAGGTGAAATTCACCGATCCGGCCGTGGTTGCGGCGATCAACGAATTCGGCAAATTCGC CAAGAACGAGAAATATGTGAGCGGCGGCGTTGCGGCCGTGGCCTCCACTGACTTCCGCGACAGCCCGAAGGGCCTCTTCG ACATTCCGCCGAAGTGCTACCTGCACCATCAGGCATCGTTCATCCCGTCCTTCTTCCCTGAGGGTACCAAGGTTGGGACG GATGCGGATTTCTTCTACATGCCGACTTACGCATCCAAGCCCGAACTCGGCAAGCCGGTTCTCGGCGCGGGTACTCTGGT CACCGTCACCAAGGAAGCGCCGGCTGCCAAGGCATTCGTCGAATTCCTGAAAACCCCGATTGCCCATGAAGTGTGGATGG CGCAGTCCAGCTTCCTGACACCGTATAAGGGTGTGAATGTCGACACCTATGCCAATGAGCAGATGAAGCGTCAGGGTGAA ATCCTGACCACGGCGACGACCTTCGGTTTTGATGGCTCCGACCTGATGCCCGGCAAGATCGGCGCTGGCGCATTCTGGAC CGGCATGATCGATTTCGTCGGCGGCAAATCCGCCGATCAGGTCGCCGCCGATATCCAGAAGGCTTGGGACGGCCTGAAGT AA
Upstream 100 bases:
>100_bases TCTTGACTCCATCTCGAAGACAATGAGATGAATAGGTAGCCAAAGCGCTTTGATTGGAAGAGGACGCTTTGAGCCTTTTA TGTGATGGGAGGTAAATCAC
Downstream 100 bases:
>100_bases CCATCGGCCAGGCAAATTCCGGAAAACCGTTCTGCGGTTTTTCGATCAAGATCTGCGGTAAAAAGGCCCGGCGGCTTGCT GCCGGGCCTCATTGAAGGAA
Product: ABC transporter, substrate binding protein (alpha-glucoside)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MRKTLLATAASMVLLSGSVFAADLKFAPGADAKFNWKSYEDFKAAHADLKGQTLTIFGPWRGEDEALFQSVLAYFADATG VNVRYSSSENYEQQIVIDTQAGSPPNIAILPQPGLLADLAAKGFLVPLGDDTAKWVEENYGAGKSWVDLGSYKGKDGNKA YFAFPFKADVKSLVWYVPENFEEAGYKVPESMEDLLKLTDQIVADGGTPWCIGLGSGGATGWPATDWVEDLMLRTQPLDV YQKWTTNEVKFTDPAVVAAINEFGKFAKNEKYVSGGVAAVASTDFRDSPKGLFDIPPKCYLHHQASFIPSFFPEGTKVGT DADFFYMPTYASKPELGKPVLGAGTLVTVTKEAPAAKAFVEFLKTPIAHEVWMAQSSFLTPYKGVNVDTYANEQMKRQGE ILTTATTFGFDGSDLMPGKIGAGAFWTGMIDFVGGKSADQVAADIQKAWDGLK
Sequences:
>Translated_453_residues MRKTLLATAASMVLLSGSVFAADLKFAPGADAKFNWKSYEDFKAAHADLKGQTLTIFGPWRGEDEALFQSVLAYFADATG VNVRYSSSENYEQQIVIDTQAGSPPNIAILPQPGLLADLAAKGFLVPLGDDTAKWVEENYGAGKSWVDLGSYKGKDGNKA YFAFPFKADVKSLVWYVPENFEEAGYKVPESMEDLLKLTDQIVADGGTPWCIGLGSGGATGWPATDWVEDLMLRTQPLDV YQKWTTNEVKFTDPAVVAAINEFGKFAKNEKYVSGGVAAVASTDFRDSPKGLFDIPPKCYLHHQASFIPSFFPEGTKVGT DADFFYMPTYASKPELGKPVLGAGTLVTVTKEAPAAKAFVEFLKTPIAHEVWMAQSSFLTPYKGVNVDTYANEQMKRQGE ILTTATTFGFDGSDLMPGKIGAGAFWTGMIDFVGGKSADQVAADIQKAWDGLK >Mature_453_residues MRKTLLATAASMVLLSGSVFAADLKFAPGADAKFNWKSYEDFKAAHADLKGQTLTIFGPWRGEDEALFQSVLAYFADATG VNVRYSSSENYEQQIVIDTQAGSPPNIAILPQPGLLADLAAKGFLVPLGDDTAKWVEENYGAGKSWVDLGSYKGKDGNKA YFAFPFKADVKSLVWYVPENFEEAGYKVPESMEDLLKLTDQIVADGGTPWCIGLGSGGATGWPATDWVEDLMLRTQPLDV YQKWTTNEVKFTDPAVVAAINEFGKFAKNEKYVSGGVAAVASTDFRDSPKGLFDIPPKCYLHHQASFIPSFFPEGTKVGT DADFFYMPTYASKPELGKPVLGAGTLVTVTKEAPAAKAFVEFLKTPIAHEVWMAQSSFLTPYKGVNVDTYANEQMKRQGE ILTTATTFGFDGSDLMPGKIGAGAFWTGMIDFVGGKSADQVAADIQKAWDGLK
Specific function: Part of the binding-protein-dependent transport system for alpha-glucosides such as sucrose, maltose and trehalose [H]
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 49091; Mature: 49091
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKTLLATAASMVLLSGSVFAADLKFAPGADAKFNWKSYEDFKAAHADLKGQTLTIFGPW CCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCEECCCCCHHHHHHHCCCCCCEEEEEECC RGEDEALFQSVLAYFADATGVNVRYSSSENYEQQIVIDTQAGSPPNIAILPQPGLLADLA CCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCHHHHHH AKGFLVPLGDDTAKWVEENYGAGKSWVDLGSYKGKDGNKAYFAFPFKADVKSLVWYVPEN HCCEEEECCCCHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEEECCHHCCCHHEEECCCC FEEAGYKVPESMEDLLKLTDQIVADGGTPWCIGLGSGGATGWPATDWVEDLMLRTQPLDV HHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCHHH YQKWTTNEVKFTDPAVVAAINEFGKFAKNEKYVSGGVAAVASTDFRDSPKGLFDIPPKCY HHHCCCCCEEECCCHHHHHHHHHHHHHCCCCEECCCEEEEEECCCCCCCCCCEECCCHHE LHHQASFIPSFFPEGTKVGTDADFFYMPTYASKPELGKPVLGAGTLVTVTKEAPAAKAFV EECHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHH EFLKTPIAHEVWMAQSSFLTPYKGVNVDTYANEQMKRQGEILTTATTFGFDGSDLMPGKI HHHHCCHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHCCCEEEEEEEECCCCCCCCCCCC GAGAFWTGMIDFVGGKSADQVAADIQKAWDGLK CCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MRKTLLATAASMVLLSGSVFAADLKFAPGADAKFNWKSYEDFKAAHADLKGQTLTIFGPW CCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCEECCCCCHHHHHHHCCCCCCEEEEEECC RGEDEALFQSVLAYFADATGVNVRYSSSENYEQQIVIDTQAGSPPNIAILPQPGLLADLA CCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCHHHHHH AKGFLVPLGDDTAKWVEENYGAGKSWVDLGSYKGKDGNKAYFAFPFKADVKSLVWYVPEN HCCEEEECCCCHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEEECCHHCCCHHEEECCCC FEEAGYKVPESMEDLLKLTDQIVADGGTPWCIGLGSGGATGWPATDWVEDLMLRTQPLDV HHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCHHH YQKWTTNEVKFTDPAVVAAINEFGKFAKNEKYVSGGVAAVASTDFRDSPKGLFDIPPKCY HHHCCCCCEEECCCHHHHHHHHHHHHHCCCCEECCCEEEEEECCCCCCCCCCEECCCHHE LHHQASFIPSFFPEGTKVGTDADFFYMPTYASKPELGKPVLGAGTLVTVTKEAPAAKAFV EECHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHH EFLKTPIAHEVWMAQSSFLTPYKGVNVDTYANEQMKRQGEILTTATTFGFDGSDLMPGKI HHHHCCHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHCCCEEEEEEEECCCCCCCCCCCC GAGAFWTGMIDFVGGKSADQVAADIQKAWDGLK CCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10400573; 11481430 [H]