Click here to switch to the map view.

The map label for this gene is aglF [H]

Identifier: 159184379

GI number: 159184379

Start: 576114

End: 577034

Strand: Direct

Name: aglF [H]

Synonym: Atu0592

Alternate gene names: 159184379

Gene position: 576114-577034 (Clockwise)

Preceding gene: 15887936

Following gene: 15887938

Centisome position: 20.27

GC content: 58.63

Gene sequence:

>921_bases
ATGATCTTTCCCGTCCGCTCGGGAGACGTCATTCACGCATCCCGCAACCTCAACCGACGTGCCGCCGTTCGGCCGTGGCT
TTTCATCGGCCCGGCGCTGATCCTGCTGCTCGTTTATCTGGTCTATCCCGTCATCGCCACGCTGATCCTGTCCTTCTATG
ATAGGACCGGCGCTGAATTCGTCGGCCTTGCCAATTATCGCTGGGCCTTCTTCGATGCCGGTTTCCGCCAGTCGATCTTC
AACAATATCCTCTGGCTGGCCGTCGTGCCGGCCGCCTGCACCTTCTTCGGCCTCGTCATTGCCGTTATGACCGACCGCAT
CTGGTGGGGCAACATCGCCAAATCCATCGTCTTCATGCCGATGGCGATCTCCTTTGTCGGCGCGTCGGTCATCTGGAAGT
TCATCTACGAATACCGCGCCGAGGGCCAGGTGCAGATCGGCCTCCTCAACGCCGTCGTCGAATTTTTCGGCGGCAGCCCG
GAGGTTTGGATTTCCATGCCCTTCTGGAACAATTTCTTCCTGATGGTGATCCTCATCTGGATCCAGACCGGTTTCGCCAT
GGTCATCCTGTCGGCGGCGTTGCGCGGCATTCCGGAAGAAACCATCGAGGCGGCCGTCATCGATGGCGCCAATGGCTGGC
AGATTTTCTGGAAGATCATGGTTCCACAGATCTGGGGCACCATCGCCGTCGTCTGGACGACCATTACCATCCTCGTGCTC
AAGGTCTTCGATATCGTGCTGACCATGACCAACGGCCAATGGAACACCATGGTTCTCGCCAATCTCATGTTCGACTGGAT
GTTCCGCGGTGGAGGCGATAGCGGCCGAAGTGCTGTGATCGCGCTCATCATCATGGCGGCCGTTACCCCGATCATGGTCT
GGAACATCCGCCAGGCAAACCGCGAGATGGAGGGCCGCTGA

Upstream 100 bases:

>100_bases
AGGGAACATGGCTCAACAACTCGTGTCCGCCATCGGCGTCATGGTAGCCGGCGTTTTTGCCTGCGCTGCCTATTATTGGC
TATCCGATAAGGCGTTGCAG

Downstream 100 bases:

>100_bases
GATGAACATAATCAAACGTCTTCGCCGCGTCGGCTTGCCGCGCCTCATCGTCCACGCCAGTGTTCTGCTCGTCGTGCTTC
TCTGGCTGCTGCCCACCCTC

Product: ABC transporter, membrane spanning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MIFPVRSGDVIHASRNLNRRAAVRPWLFIGPALILLLVYLVYPVIATLILSFYDRTGAEFVGLANYRWAFFDAGFRQSIF
NNILWLAVVPAACTFFGLVIAVMTDRIWWGNIAKSIVFMPMAISFVGASVIWKFIYEYRAEGQVQIGLLNAVVEFFGGSP
EVWISMPFWNNFFLMVILIWIQTGFAMVILSAALRGIPEETIEAAVIDGANGWQIFWKIMVPQIWGTIAVVWTTITILVL
KVFDIVLTMTNGQWNTMVLANLMFDWMFRGGGDSGRSAVIALIIMAAVTPIMVWNIRQANREMEGR

Sequences:

>Translated_306_residues
MIFPVRSGDVIHASRNLNRRAAVRPWLFIGPALILLLVYLVYPVIATLILSFYDRTGAEFVGLANYRWAFFDAGFRQSIF
NNILWLAVVPAACTFFGLVIAVMTDRIWWGNIAKSIVFMPMAISFVGASVIWKFIYEYRAEGQVQIGLLNAVVEFFGGSP
EVWISMPFWNNFFLMVILIWIQTGFAMVILSAALRGIPEETIEAAVIDGANGWQIFWKIMVPQIWGTIAVVWTTITILVL
KVFDIVLTMTNGQWNTMVLANLMFDWMFRGGGDSGRSAVIALIIMAAVTPIMVWNIRQANREMEGR
>Mature_306_residues
MIFPVRSGDVIHASRNLNRRAAVRPWLFIGPALILLLVYLVYPVIATLILSFYDRTGAEFVGLANYRWAFFDAGFRQSIF
NNILWLAVVPAACTFFGLVIAVMTDRIWWGNIAKSIVFMPMAISFVGASVIWKFIYEYRAEGQVQIGLLNAVVEFFGGSP
EVWISMPFWNNFFLMVILIWIQTGFAMVILSAALRGIPEETIEAAVIDGANGWQIFWKIMVPQIWGTIAVVWTTITILVL
KVFDIVLTMTNGQWNTMVLANLMFDWMFRGGGDSGRSAVIALIIMAAVTPIMVWNIRQANREMEGR

Specific function: Part of the binding-protein-dependent transport system for alpha-glucosides such as sucrose, maltose and trehalose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=261, Percent_Identity=25.6704980842912, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34551; Mature: 34551

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFPVRSGDVIHASRNLNRRAAVRPWLFIGPALILLLVYLVYPVIATLILSFYDRTGAEF
CEECCCCCCEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
VGLANYRWAFFDAGFRQSIFNNILWLAVVPAACTFFGLVIAVMTDRIWWGNIAKSIVFMP
EECCCCEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
MAISFVGASVIWKFIYEYRAEGQVQIGLLNAVVEFFGGSPEVWISMPFWNNFFLMVILIW
HHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHH
IQTGFAMVILSAALRGIPEETIEAAVIDGANGWQIFWKIMVPQIWGTIAVVWTTITILVL
HHHHHHHHHHHHHHHCCCHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVFDIVLTMTNGQWNTMVLANLMFDWMFRGGGDSGRSAVIALIIMAAVTPIMVWNIRQAN
HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHH
REMEGR
HCCCCC
>Mature Secondary Structure
MIFPVRSGDVIHASRNLNRRAAVRPWLFIGPALILLLVYLVYPVIATLILSFYDRTGAEF
CEECCCCCCEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
VGLANYRWAFFDAGFRQSIFNNILWLAVVPAACTFFGLVIAVMTDRIWWGNIAKSIVFMP
EECCCCEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
MAISFVGASVIWKFIYEYRAEGQVQIGLLNAVVEFFGGSPEVWISMPFWNNFFLMVILIW
HHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHH
IQTGFAMVILSAALRGIPEETIEAAVIDGANGWQIFWKIMVPQIWGTIAVVWTTITILVL
HHHHHHHHHHHHHHHCCCHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVFDIVLTMTNGQWNTMVLANLMFDWMFRGGGDSGRSAVIALIIMAAVTPIMVWNIRQAN
HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHH
REMEGR
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10400573; 11481430 [H]