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The map label for this gene is motA

Identifier: 15887906

GI number: 15887906

Start: 545748

End: 546620

Strand: Direct

Name: motA

Synonym: Atu0560

Alternate gene names: 15887906

Gene position: 545748-546620 (Clockwise)

Preceding gene: 15887879

Following gene: 159184367

Centisome position: 19.21

GC content: 57.39

Gene sequence:

>873_bases
ATGAATATTGTAATTGGACTTATAATCACCTTCGGCTGCATCATCGGCGGCTATATGGCGATGGGCGGTCATTTGAACGT
GCTGGTTCAGCCGTTCGAATTGATGATCATCGGAGGCGCCGGTCTCGGCGGCTTCATCATGGCGAACCCGATGAAGGTCG
TGAAGGATTCGGGCAAGGCGCTCGGCGAGGCCTTCAAGCATTCGGTTCCGAAGGAGCGCAACTATCTCGACGTGCTCGGC
GTGCTGTATTCGCTGATGCGCGACCTGCGTACGAAGTCGCGCAACGAGATCGAAGCGCACATCGATAATCCGGAAGAATC
CTCGATCTTCCAGAGCGCGCCGTCGGTCCTGAAGAACAAGGAACTCACCTCCTTCATCTGTGATTATGTCCGTCTCATCA
TCATCGGCAATGCCCGCAGCCACGAAATCGAGGCGCTGATGGATGAGGAAATCGAGACCATCCTGCACGACAAGCTGAAG
CCTTACCACGCGATCACCACCATGGGCGATTCCTTCCCCGCCATCGGTATCGTCGCGGCGGTCCTCGGCGTCATCAAGGC
CATGGGCAAGATCAACGAATCGCCGGAAGTGCTCGGCGGTCTGATCGGCGCAGCACTCGTCGGCACCATGCTCGGCATCA
TCCTGTCCTATTCGATCTGCAACCCGCTCGCTTCGCAGGTCAAGATCGTCCGCACCAAGCAGCACCGCCTCTACATCATC
GTCAAGCAGACGCTGATCGCCTACATGAACGGCTCGGTGCCGCAGGTTGCGCTTGAATATGGCCGCAAGACCATCTCCAA
CTATGAACGGCCGTCCATCGATGCCGTCGAGCAGGAGATGATGAATCCCGGCGGCGAAAACAAGGCGGCATGA

Upstream 100 bases:

>100_bases
GCTGAGGTGAGGGCGGGGCAGGAGGCATTGCGGACAGGTTCACGCAAGCCACATTTTCTAGACATGGCGCCATGGAACAC
TGTTCGGGCGTGGTCGATCA

Downstream 100 bases:

>100_bases
TCATGGCAAAAGCTGCAGCGCAGAAAGCCTCCGCCCCCACCATCGACACCGCCCTGCTCGCGAAACTTACGGGAGGGCTC
ACCGACCGCAAGACGATCGC

Product: flagellar motor protein MotA

Products: NA

Alternate protein names: Chemotaxis protein MotA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MNIVIGLIITFGCIIGGYMAMGGHLNVLVQPFELMIIGGAGLGGFIMANPMKVVKDSGKALGEAFKHSVPKERNYLDVLG
VLYSLMRDLRTKSRNEIEAHIDNPEESSIFQSAPSVLKNKELTSFICDYVRLIIIGNARSHEIEALMDEEIETILHDKLK
PYHAITTMGDSFPAIGIVAAVLGVIKAMGKINESPEVLGGLIGAALVGTMLGIILSYSICNPLASQVKIVRTKQHRLYII
VKQTLIAYMNGSVPQVALEYGRKTISNYERPSIDAVEQEMMNPGGENKAA

Sequences:

>Translated_290_residues
MNIVIGLIITFGCIIGGYMAMGGHLNVLVQPFELMIIGGAGLGGFIMANPMKVVKDSGKALGEAFKHSVPKERNYLDVLG
VLYSLMRDLRTKSRNEIEAHIDNPEESSIFQSAPSVLKNKELTSFICDYVRLIIIGNARSHEIEALMDEEIETILHDKLK
PYHAITTMGDSFPAIGIVAAVLGVIKAMGKINESPEVLGGLIGAALVGTMLGIILSYSICNPLASQVKIVRTKQHRLYII
VKQTLIAYMNGSVPQVALEYGRKTISNYERPSIDAVEQEMMNPGGENKAA
>Mature_290_residues
MNIVIGLIITFGCIIGGYMAMGGHLNVLVQPFELMIIGGAGLGGFIMANPMKVVKDSGKALGEAFKHSVPKERNYLDVLG
VLYSLMRDLRTKSRNEIEAHIDNPEESSIFQSAPSVLKNKELTSFICDYVRLIIIGNARSHEIEALMDEEIETILHDKLK
PYHAITTMGDSFPAIGIVAAVLGVIKAMGKINESPEVLGGLIGAALVGTMLGIILSYSICNPLASQVKIVRTKQHRLYII
VKQTLIAYMNGSVPQVALEYGRKTISNYERPSIDAVEQEMMNPGGENKAA

Specific function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for rotation of the flagellar motor. Probable transmembrane proton channel

COG id: COG1291

COG function: function code N; Flagellar motor component

Gene ontology:

Cell location: Cell inner membrane; Multi- pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MotA family

Homologues:

Organism=Escherichia coli, GI1788199, Length=278, Percent_Identity=43.5251798561151, Blast_Score=230, Evalue=6e-62,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): MOTA_AGRT5 (Q44456)

Other databases:

- EMBL:   U63290
- EMBL:   U95165
- EMBL:   AE007869
- PIR:   AC2645
- PIR:   C97427
- RefSeq:   NP_353587.1
- STRING:   Q44456
- GeneID:   1132598
- GenomeReviews:   AE007869_GR
- KEGG:   atu:Atu0560
- eggNOG:   COG1291
- HOGENOM:   HBG299720
- OMA:   LYVIVKQ
- PhylomeDB:   Q44456
- ProtClustDB:   PRK09110
- BioCyc:   ATUM176299-1:ATU0560-MONOMER
- InterPro:   IPR000540
- InterPro:   IPR022522
- InterPro:   IPR002898
- TIGRFAMs:   TIGR03818

Pfam domain/function: PF01618 MotA_ExbB

EC number: NA

Molecular weight: Translated: 31530; Mature: 31530

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS01307 MOTA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xbeca984)-; HASH(0xd16397c)-; HASH(0xc6e6178)-; HASH(0xd3f0050)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVIGLIITFGCIIGGYMAMGGHLNVLVQPFELMIIGGAGLGGFIMANPMKVVKDSGKA
CCHHHHHHHHHHHHHHHHHHCCCCHHEEECCEEEEEECCCCCCCHHHCCCHHHHHHCHHH
LGEAFKHSVPKERNYLDVLGVLYSLMRDLRTKSRNEIEAHIDNPEESSIFQSAPSVLKNK
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHCC
ELTSFICDYVRLIIIGNARSHEIEALMDEEIETILHDKLKPYHAITTMGDSFPAIGIVAA
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHH
VLGVIKAMGKINESPEVLGGLIGAALVGTMLGIILSYSICNPLASQVKIVRTKQHRLYII
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEE
VKQTLIAYMNGSVPQVALEYGRKTISNYERPSIDAVEQEMMNPGGENKAA
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCH
>Mature Secondary Structure
MNIVIGLIITFGCIIGGYMAMGGHLNVLVQPFELMIIGGAGLGGFIMANPMKVVKDSGKA
CCHHHHHHHHHHHHHHHHHHCCCCHHEEECCEEEEEECCCCCCCHHHCCCHHHHHHCHHH
LGEAFKHSVPKERNYLDVLGVLYSLMRDLRTKSRNEIEAHIDNPEESSIFQSAPSVLKNK
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHCC
ELTSFICDYVRLIIIGNARSHEIEALMDEEIETILHDKLKPYHAITTMGDSFPAIGIVAA
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHH
VLGVIKAMGKINESPEVLGGLIGAALVGTMLGIILSYSICNPLASQVKIVRTKQHRLYII
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEE
VKQTLIAYMNGSVPQVALEYGRKTISNYERPSIDAVEQEMMNPGGENKAA
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9161425; 11743193; 11743194