Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15887805
Identifier: 15887805
GI number: 15887805
Start: 448012
End: 448758
Strand: Direct
Name: 15887805
Synonym: Atu0453
Alternate gene names: NA
Gene position: 448012-448758 (Clockwise)
Preceding gene: 159185416
Following gene: 15887806
Centisome position: 15.77
GC content: 57.3
Gene sequence:
>747_bases ATGTCCTTCATCCGGTTTGCTGCCCGCATCTGCGCCGTGGAGGCGATCAAGGGAAACACGGTTGTCGGTTCCAACGTGCT GGACAGCGAAATCGGCGTGCTTGATATCGCTGCCGATGGCTCCTTGCGGACGGATAAAGATAAGCCTTTCATCTCCGTCT ACACGGACGGCTCGAAATTGATAGAGGGCCTTGAGCTTCGCTCGCTGGCATCGCCGGGGCAACTCGATATCGTTTTTGAA GCTGGCGTGACCACGGCGCACGCCGTCACCGATACCGAGACGGACGAAAGCGTTATTCTCGGAATGCCCGCGACCGACGC GACGTTTGAGTTTCACCTTGATATGGCGCTTCGTCAGACCGGCGATGCTCTCAATGACTCGGAGAACGAATGGGCGGAAA TCTTCCGCTCTCTCTGTTCGTCGTTTCAATCCGCATCGCGCTCGCGCATCAGCGGCGATACGAACGGCGTGCGGCTTGCT GCGCACCAACTGAAAATCACTGCCAATATGGTGGCCGAACCGTTGTGCGGGCAACCGCTCAATCCCGGCTCTCCTTTCGC CAAATTCGTTGCGAAGTGCGAAAGTGATCTTGCTCCGAATGATCCGTCCATGGCGGAAAAGATCGCCCTTATTCGAGCGC AGCTTTCAGGCGATGCCAACGAATTGCAGACGGCCATGCGGCGCTACGGTCTTATCTATGACGAGGCCGACGCCATGTTG ATCACACCTTACGAGGGGTCGCCCTGA
Upstream 100 bases:
>100_bases TGGACCGGGCTGGCGAACCGGCTTGGTCGGTTGATTTTGTCAGCGACCGGCATAGCAACCTTATCGCTGTCGCCCTGAAA GAGATTTAGGAGCCTCCTCC
Downstream 100 bases:
>100_bases TGGCCAGTTTGGTGGACCAGATCACGGACCTTTATGTACGGATGGCCGAACTTGAGCGCCGGAACCGCAACCGGCGGCGC AAGGGTACGATTGCGGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MSFIRFAARICAVEAIKGNTVVGSNVLDSEIGVLDIAADGSLRTDKDKPFISVYTDGSKLIEGLELRSLASPGQLDIVFE AGVTTAHAVTDTETDESVILGMPATDATFEFHLDMALRQTGDALNDSENEWAEIFRSLCSSFQSASRSRISGDTNGVRLA AHQLKITANMVAEPLCGQPLNPGSPFAKFVAKCESDLAPNDPSMAEKIALIRAQLSGDANELQTAMRRYGLIYDEADAML ITPYEGSP
Sequences:
>Translated_248_residues MSFIRFAARICAVEAIKGNTVVGSNVLDSEIGVLDIAADGSLRTDKDKPFISVYTDGSKLIEGLELRSLASPGQLDIVFE AGVTTAHAVTDTETDESVILGMPATDATFEFHLDMALRQTGDALNDSENEWAEIFRSLCSSFQSASRSRISGDTNGVRLA AHQLKITANMVAEPLCGQPLNPGSPFAKFVAKCESDLAPNDPSMAEKIALIRAQLSGDANELQTAMRRYGLIYDEADAML ITPYEGSP >Mature_247_residues SFIRFAARICAVEAIKGNTVVGSNVLDSEIGVLDIAADGSLRTDKDKPFISVYTDGSKLIEGLELRSLASPGQLDIVFEA GVTTAHAVTDTETDESVILGMPATDATFEFHLDMALRQTGDALNDSENEWAEIFRSLCSSFQSASRSRISGDTNGVRLAA HQLKITANMVAEPLCGQPLNPGSPFAKFVAKCESDLAPNDPSMAEKIALIRAQLSGDANELQTAMRRYGLIYDEADAMLI TPYEGSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26581; Mature: 26450
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFIRFAARICAVEAIKGNTVVGSNVLDSEIGVLDIAADGSLRTDKDKPFISVYTDGSKL CHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECHHHH IEGLELRSLASPGQLDIVFEAGVTTAHAVTDTETDESVILGMPATDATFEFHLDMALRQT HHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCEEEEECCCCCCEEEEEEHHHHHHC GDALNDSENEWAEIFRSLCSSFQSASRSRISGDTNGVRLAAHQLKITANMVAEPLCGQPL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHEEEEHHHHHCCCCCCCC NPGSPFAKFVAKCESDLAPNDPSMAEKIALIRAQLSGDANELQTAMRRYGLIYDEADAML CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEECCCEEE ITPYEGSP EECCCCCC >Mature Secondary Structure SFIRFAARICAVEAIKGNTVVGSNVLDSEIGVLDIAADGSLRTDKDKPFISVYTDGSKL HHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECHHHH IEGLELRSLASPGQLDIVFEAGVTTAHAVTDTETDESVILGMPATDATFEFHLDMALRQT HHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCEEEEECCCCCCEEEEEEHHHHHHC GDALNDSENEWAEIFRSLCSSFQSASRSRISGDTNGVRLAAHQLKITANMVAEPLCGQPL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHEEEEHHHHHCCCCCCCC NPGSPFAKFVAKCESDLAPNDPSMAEKIALIRAQLSGDANELQTAMRRYGLIYDEADAML CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEECCCEEE ITPYEGSP EECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA