Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is metK [H]
Identifier: 15887713
GI number: 15887713
Start: 356353
End: 357615
Strand: Direct
Name: metK [H]
Synonym: Atu0362
Alternate gene names: 15887713
Gene position: 356353-357615 (Clockwise)
Preceding gene: 159184276
Following gene: 15887714
Centisome position: 12.54
GC content: 61.2
Gene sequence:
>1263_bases ATGCGTGCCAATTACCTGTTCACCAGCGAGTCCGTGGCCGAGGGTCATCCGGACAAGGTTTGTGATCGTATTTCCGATGA AATCGTGGATCTTATTTACCGTGAGGCGGCCAAGACGGGCGTTGACCCATGGACCGTGCGCATCGCATGCGAAACGCTTG CGACGACCAACCGCGTTGTTATCGCCGGTGAGGTTCGGGTTCCCGACACGCTTCTGAAGAAGGACAAGGACGGCAAGGTC GTCAAGGACGCCGCCGGCCACCCGGTCATCAACCCTTCCAAGTTCAAGTCCGCCGCCCGAAAGGCGATCCGCGACATCGG CTACGAACAGGATGGTTTCCACTGGAAGACCGCCAAGATCGACGTTCTGCTGCATCCGCAGTCGGCCGATATCGCGCAGG GCGTGGATAATGCCTCCGACAAGCAGGGTGACGAGGGCGCTGGCGACCAGGGCATCATGTTCGGTTACGCTTGCAAGGAA ACGCCGGACCTGATGCCGGCGCCGATCTATTATTCTCACCGCATCCTGCAGCTGCTGGCCACCGCCCGCAAGAGCGGCGA AGGCGAAGCGGCGAAGCTCGGCCCCGATGCCAAGAGCCAGGTGACGGTTCGTTACGTCGACGGCAAGGCTTCGGAAGCCG TATCCATCGTTCTGTCCACGCAGCACCTCGATGCCAGCTGGGACTCGAAGAAGGTCCGTGAGGTCGTCGAACCCTATATT CGCGAGGCTCTGGGCGAGTTGAAGATCGCTGACGATTGCCAGTGGTATATCAACCCGACGGGCAAGTTCGTCATCGGCGG TCCCGATGGCGATGCCGGCCTGACCGGCCGCAAGATCATCGTCGACACCTATGGCGGTGCTGCCCCCCATGGTGGTGGCG CATTCTCCGGCAAGGACACGACCAAGGTCGACCGTTCGGCCGCTTATGCCGCCCGCTATCTCGCCAAGAACGTCGTGGCT GCCGGCCTTGCCGAGCGCTGCACGATCCAGATCGCCTATGCGATCGGCGTTGCCCAGCCGCTGTCGATCTATGTCGATCT GCACGGCACGGGCAAGGTCAGCGAAGATCAGGTCGAAGCCGCGATCCGCAAGGTCATGGACCTGTCGCCGTCGGGCATCC GCCGTCATCTCGATCTCAACAAGCCGATCTACGCCAAGACGTCTTCTTACGGTCACTTCGGCCGCAAGGCTGGTCGTGAC GGTTCCTTCTCCTGGGAGAAGCTCGATCTGGTGAAGCCGCTCAAGGAAGCTTTGAGCGCTTGA
Upstream 100 bases:
>100_bases GGAATTCTCACATAAAGATATATTTATGTGGTTGTGTCCTTGTTTTTCGCGGCCGAAATGACTAACAAACTCCAAGACCA TTCTTTGAGGGGAATCCCGC
Downstream 100 bases:
>100_bases AGCATTTCCAGTAAAACTGCGTAGCGGTTTTACGTCCGGAGAATGCGGAGGCTTTTTCTAAGCCTTGTTATTTGGCGGTG ATTGAGAGATACCGTCTACA
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase [H]
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MRANYLFTSESVAEGHPDKVCDRISDEIVDLIYREAAKTGVDPWTVRIACETLATTNRVVIAGEVRVPDTLLKKDKDGKV VKDAAGHPVINPSKFKSAARKAIRDIGYEQDGFHWKTAKIDVLLHPQSADIAQGVDNASDKQGDEGAGDQGIMFGYACKE TPDLMPAPIYYSHRILQLLATARKSGEGEAAKLGPDAKSQVTVRYVDGKASEAVSIVLSTQHLDASWDSKKVREVVEPYI REALGELKIADDCQWYINPTGKFVIGGPDGDAGLTGRKIIVDTYGGAAPHGGGAFSGKDTTKVDRSAAYAARYLAKNVVA AGLAERCTIQIAYAIGVAQPLSIYVDLHGTGKVSEDQVEAAIRKVMDLSPSGIRRHLDLNKPIYAKTSSYGHFGRKAGRD GSFSWEKLDLVKPLKEALSA
Sequences:
>Translated_420_residues MRANYLFTSESVAEGHPDKVCDRISDEIVDLIYREAAKTGVDPWTVRIACETLATTNRVVIAGEVRVPDTLLKKDKDGKV VKDAAGHPVINPSKFKSAARKAIRDIGYEQDGFHWKTAKIDVLLHPQSADIAQGVDNASDKQGDEGAGDQGIMFGYACKE TPDLMPAPIYYSHRILQLLATARKSGEGEAAKLGPDAKSQVTVRYVDGKASEAVSIVLSTQHLDASWDSKKVREVVEPYI REALGELKIADDCQWYINPTGKFVIGGPDGDAGLTGRKIIVDTYGGAAPHGGGAFSGKDTTKVDRSAAYAARYLAKNVVA AGLAERCTIQIAYAIGVAQPLSIYVDLHGTGKVSEDQVEAAIRKVMDLSPSGIRRHLDLNKPIYAKTSSYGHFGRKAGRD GSFSWEKLDLVKPLKEALSA >Mature_420_residues MRANYLFTSESVAEGHPDKVCDRISDEIVDLIYREAAKTGVDPWTVRIACETLATTNRVVIAGEVRVPDTLLKKDKDGKV VKDAAGHPVINPSKFKSAARKAIRDIGYEQDGFHWKTAKIDVLLHPQSADIAQGVDNASDKQGDEGAGDQGIMFGYACKE TPDLMPAPIYYSHRILQLLATARKSGEGEAAKLGPDAKSQVTVRYVDGKASEAVSIVLSTQHLDASWDSKKVREVVEPYI REALGELKIADDCQWYINPTGKFVIGGPDGDAGLTGRKIIVDTYGGAAPHGGGAFSGKDTTKVDRSAAYAARYLAKNVVA AGLAERCTIQIAYAIGVAQPLSIYVDLHGTGKVSEDQVEAAIRKVMDLSPSGIRRHLDLNKPIYAKTSSYGHFGRKAGRD GSFSWEKLDLVKPLKEALSA
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family [H]
Homologues:
Organism=Homo sapiens, GI5174529, Length=410, Percent_Identity=44.6341463414634, Blast_Score=298, Evalue=4e-81, Organism=Homo sapiens, GI4557737, Length=408, Percent_Identity=44.8529411764706, Blast_Score=294, Evalue=8e-80, Organism=Escherichia coli, GI1789311, Length=418, Percent_Identity=48.3253588516746, Blast_Score=355, Evalue=2e-99, Organism=Caenorhabditis elegans, GI17538498, Length=410, Percent_Identity=45.1219512195122, Blast_Score=300, Evalue=1e-81, Organism=Caenorhabditis elegans, GI17538494, Length=410, Percent_Identity=44.8780487804878, Blast_Score=296, Evalue=2e-80, Organism=Caenorhabditis elegans, GI25145633, Length=413, Percent_Identity=44.0677966101695, Blast_Score=290, Evalue=8e-79, Organism=Caenorhabditis elegans, GI17551082, Length=414, Percent_Identity=41.7874396135266, Blast_Score=281, Evalue=6e-76, Organism=Caenorhabditis elegans, GI32565911, Length=320, Percent_Identity=47.8125, Blast_Score=255, Evalue=4e-68, Organism=Caenorhabditis elegans, GI25145635, Length=320, Percent_Identity=46.875, Blast_Score=245, Evalue=3e-65, Organism=Caenorhabditis elegans, GI32565905, Length=329, Percent_Identity=46.2006079027356, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI32565903, Length=303, Percent_Identity=48.1848184818482, Blast_Score=241, Evalue=6e-64, Organism=Saccharomyces cerevisiae, GI6320710, Length=414, Percent_Identity=43.2367149758454, Blast_Score=301, Evalue=2e-82, Organism=Saccharomyces cerevisiae, GI6323209, Length=418, Percent_Identity=43.0622009569378, Blast_Score=300, Evalue=4e-82, Organism=Drosophila melanogaster, GI24580527, Length=420, Percent_Identity=44.2857142857143, Blast_Score=291, Evalue=6e-79, Organism=Drosophila melanogaster, GI24580525, Length=420, Percent_Identity=44.2857142857143, Blast_Score=291, Evalue=6e-79, Organism=Drosophila melanogaster, GI45552159, Length=420, Percent_Identity=43.8095238095238, Blast_Score=285, Evalue=5e-77, Organism=Drosophila melanogaster, GI24580529, Length=420, Percent_Identity=43.8095238095238, Blast_Score=285, Evalue=5e-77, Organism=Drosophila melanogaster, GI24580537, Length=420, Percent_Identity=43.8095238095238, Blast_Score=285, Evalue=5e-77, Organism=Drosophila melanogaster, GI24580533, Length=420, Percent_Identity=43.8095238095238, Blast_Score=285, Evalue=5e-77, Organism=Drosophila melanogaster, GI24580535, Length=420, Percent_Identity=43.8095238095238, Blast_Score=285, Evalue=5e-77, Organism=Drosophila melanogaster, GI24580531, Length=420, Percent_Identity=43.8095238095238, Blast_Score=285, Evalue=5e-77, Organism=Drosophila melanogaster, GI24580541, Length=405, Percent_Identity=43.2098765432099, Blast_Score=265, Evalue=3e-71, Organism=Drosophila melanogaster, GI24580539, Length=150, Percent_Identity=37.3333333333333, Blast_Score=89, Evalue=7e-18,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 [H]
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N [H]
EC number: =2.5.1.6 [H]
Molecular weight: Translated: 45328; Mature: 45328
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: PS00376 ADOMET_SYNTHETASE_1 ; PS00377 ADOMET_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRANYLFTSESVAEGHPDKVCDRISDEIVDLIYREAAKTGVDPWTVRIACETLATTNRVV CCCCEEECCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHCCCCEEE IAGEVRVPDTLLKKDKDGKVVKDAAGHPVINPSKFKSAARKAIRDIGYEQDGFHWKTAKI EEECCCCCHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEE DVLLHPQSADIAQGVDNASDKQGDEGAGDQGIMFGYACKETPDLMPAPIYYSHRILQLLA EEEECCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHH TARKSGEGEAAKLGPDAKSQVTVRYVDGKASEAVSIVLSTQHLDASWDSKKVREVVEPYI HHHHCCCCCCEECCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHH REALGELKIADDCQWYINPTGKFVIGGPDGDAGLTGRKIIVDTYGGAAPHGGGAFSGKDT HHHHHCCEECCCCEEEECCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC TKVDRSAAYAARYLAKNVVAAGLAERCTIQIAYAIGVAQPLSIYVDLHGTGKVSEDQVEA CHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEEEECCCCCEEEEEEECCCCCCCHHHHHH AIRKVMDLSPSGIRRHLDLNKPIYAKTSSYGHFGRKAGRDGSFSWEKLDLVKPLKEALSA HHHHHHCCCHHHHHHHCCCCCCEEEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MRANYLFTSESVAEGHPDKVCDRISDEIVDLIYREAAKTGVDPWTVRIACETLATTNRVV CCCCEEECCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHCCCCEEE IAGEVRVPDTLLKKDKDGKVVKDAAGHPVINPSKFKSAARKAIRDIGYEQDGFHWKTAKI EEECCCCCHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEE DVLLHPQSADIAQGVDNASDKQGDEGAGDQGIMFGYACKETPDLMPAPIYYSHRILQLLA EEEECCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHH TARKSGEGEAAKLGPDAKSQVTVRYVDGKASEAVSIVLSTQHLDASWDSKKVREVVEPYI HHHHCCCCCCEECCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHH REALGELKIADDCQWYINPTGKFVIGGPDGDAGLTGRKIIVDTYGGAAPHGGGAFSGKDT HHHHHCCEECCCCEEEECCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC TKVDRSAAYAARYLAKNVVAAGLAERCTIQIAYAIGVAQPLSIYVDLHGTGKVSEDQVEA CHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEEEECCCCCEEEEEEECCCCCCCHHHHHH AIRKVMDLSPSGIRRHLDLNKPIYAKTSSYGHFGRKAGRDGSFSWEKLDLVKPLKEALSA HHHHHHCCCHHHHHHHCCCCCCEEEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA