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The map label for this gene is ctpB

Identifier: 15887575

GI number: 15887575

Start: 229013

End: 229525

Strand: Reverse

Name: ctpB

Synonym: Atu0223

Alternate gene names: NA

Gene position: 229525-229013 (Counterclockwise)

Preceding gene: 159184218

Following gene: 15887574

Centisome position: 8.08

GC content: 47.95

Gene sequence:

>513_bases
ATGATTGTCGCGGCAATTTTTCTTATTCTTCCGCTTTGCCTTTGTTTTGCTGCTTTAAATGACCTTTTCAGCATGACGAT
CCCTAACGTGATAACCGTCGTGCTTTTATTGTCTTTCGCTTTTATCGCTCCCTTCGCGGGAATGGATTTTCAGACATTTG
GTTTGAGTTTAGCGGGCGGACTGATTGTATTTCTTGGCTGTTTCGCGCTTTTTGCCGCCAATGTCATGGGCGGAGGCGAT
GCTAAGCTCTTAACTGGAGCGGCAGTGTGGTACGGTTTCAACATTTCTCTGGTAGAGTTTCTACTTGCCGTAACACTGGT
CGGCGGAGCATTAACAGTCGGCATCCTGCTTCTGCGATCTCGGTCACAGGAAATCATGGCTTTCGGAATTCCCATTCCCG
ATTCCCTGATGGTTGCGCAGAAAATTCCCTACGGAATTGGTATCGCGATTGCGGGGCTTCTAACCTATGGCGAAGCTCCT
CTCGTCAAAGCAGCGATCGCCAGTATTTTATAA

Upstream 100 bases:

>100_bases
CATTGAAAAGCATCGTGCAGGTGACGACCCCACACAAGTGCGGACGTTGCCTGCATTTTCGCGTGGCCGGCAGCACTAGG
TCAACGAAGGTAGGCTATTT

Downstream 100 bases:

>100_bases
TTCCGAAAATTCTTATTTTTATCCAGCGATTAGAAGTTTGTTAACCACATACTTCAGGACAATATTAACCATAAATATAC
CAATCAAGCGCCATCCTAAG

Product: components of type IV pilus, prepilin peptidase

Products: NA

Alternate protein names: Type IV Prepilin Peptidase CpaA; Prepilin Peptidase Protein; Pilus Assembly Protein Prepilin Peptidase Subunit; Pilus Assembly Protein; CpaA2 Pilus Assembly Protein; Component Of Type IV Pilus Prepilin Peptidase Protein; Pilus Assembly Transmembrane Protein; Pilus Assembly Prepilin Peptidase CpaA; Components Of Type IV Pilus Prepilin Peptidase

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MIVAAIFLILPLCLCFAALNDLFSMTIPNVITVVLLLSFAFIAPFAGMDFQTFGLSLAGGLIVFLGCFALFAANVMGGGD
AKLLTGAAVWYGFNISLVEFLLAVTLVGGALTVGILLLRSRSQEIMAFGIPIPDSLMVAQKIPYGIGIAIAGLLTYGEAP
LVKAAIASIL

Sequences:

>Translated_170_residues
MIVAAIFLILPLCLCFAALNDLFSMTIPNVITVVLLLSFAFIAPFAGMDFQTFGLSLAGGLIVFLGCFALFAANVMGGGD
AKLLTGAAVWYGFNISLVEFLLAVTLVGGALTVGILLLRSRSQEIMAFGIPIPDSLMVAQKIPYGIGIAIAGLLTYGEAP
LVKAAIASIL
>Mature_170_residues
MIVAAIFLILPLCLCFAALNDLFSMTIPNVITVVLLLSFAFIAPFAGMDFQTFGLSLAGGLIVFLGCFALFAANVMGGGD
AKLLTGAAVWYGFNISLVEFLLAVTLVGGALTVGILLLRSRSQEIMAFGIPIPDSLMVAQKIPYGIGIAIAGLLTYGEAP
LVKAAIASIL

Specific function: Unknown

COG id: COG4960

COG function: function code OU; Flp pilus assembly protein, protease CpaA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.23.43

Molecular weight: Translated: 17661; Mature: 17661

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVAAIFLILPLCLCFAALNDLFSMTIPNVITVVLLLSFAFIAPFAGMDFQTFGLSLAGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LIVFLGCFALFAANVMGGGDAKLLTGAAVWYGFNISLVEFLLAVTLVGGALTVGILLLRS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
RSQEIMAFGIPIPDSLMVAQKIPYGIGIAIAGLLTYGEAPLVKAAIASIL
CCCHHEEECCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHC
>Mature Secondary Structure
MIVAAIFLILPLCLCFAALNDLFSMTIPNVITVVLLLSFAFIAPFAGMDFQTFGLSLAGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LIVFLGCFALFAANVMGGGDAKLLTGAAVWYGFNISLVEFLLAVTLVGGALTVGILLLRS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
RSQEIMAFGIPIPDSLMVAQKIPYGIGIAIAGLLTYGEAPLVKAAIASIL
CCCHHEEECCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA