Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is gntK [H]
Identifier: 15887548
GI number: 15887548
Start: 199684
End: 200175
Strand: Reverse
Name: gntK [H]
Synonym: Atu0195
Alternate gene names: 15887548
Gene position: 200175-199684 (Counterclockwise)
Preceding gene: 159184204
Following gene: 15887540
Centisome position: 7.04
GC content: 59.96
Gene sequence:
>492_bases GTGATGGGAGTGAGCGGCTCCGGCAAGTCCACGGTCGCAGAGGGACTGGCGGAGAAGCTGGGTATCGCCTTCATTGAAGG CGACAAGCTGCACCCGAAATCCAATGTCGACAAGATGTCGGAAGGCATTCCGCTGACCGACGACGACCGCTGGCCATGGC TCGATCTGATCGGCGCGGAACTGCGCAATGGCAGTGAAGGCAAGGGCGTTTTGGTTTCCTGCTCCGCCCTCAAGAAAATC TATCGCGACCGCCTTCGTGAGGCGACCGGTGGCCCACTCGCCTTCGTTTATCTTGATGGCAGCCTGGAGCTTCTCAGCCG GCGCATGGGTGAACGCAAGGGTCATTTCATGCCGCTCTCGCTGCTTCAGACCCAGCTTGCCACGCTGGAAGTGCCGACCG GGGAACCGGGTGTCGTCACGGTCAGCATCGATTCCACACCTGAGGAGATCGTAGCGAATGCGCTGGCTGGCCTGAAGACG CTAAAATTCTAG
Upstream 100 bases:
>100_bases GGAGCCGTCCAAATTTAAGGTTCCCGGCACCCGCCGCACATGGTAGGGGCTGACCGTCGAAACAGAAACATCAGAGGTTC GGGTGACACAGGCAATCGTC
Downstream 100 bases:
>100_bases AGCACGTCCGGTCTAAACGGAAGCGGGAGACGCGCTCTATCTCTTTGTTTTATCTTATTGTCCGGACGTAAACCGCTACG CAGTTTTACTGGAAATGCTC
Product: gluconokinase
Products: NA
Alternate protein names: Gluconate kinase 2 [H]
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MMGVSGSGKSTVAEGLAEKLGIAFIEGDKLHPKSNVDKMSEGIPLTDDDRWPWLDLIGAELRNGSEGKGVLVSCSALKKI YRDRLREATGGPLAFVYLDGSLELLSRRMGERKGHFMPLSLLQTQLATLEVPTGEPGVVTVSIDSTPEEIVANALAGLKT LKF
Sequences:
>Translated_163_residues MMGVSGSGKSTVAEGLAEKLGIAFIEGDKLHPKSNVDKMSEGIPLTDDDRWPWLDLIGAELRNGSEGKGVLVSCSALKKI YRDRLREATGGPLAFVYLDGSLELLSRRMGERKGHFMPLSLLQTQLATLEVPTGEPGVVTVSIDSTPEEIVANALAGLKT LKF >Mature_163_residues MMGVSGSGKSTVAEGLAEKLGIAFIEGDKLHPKSNVDKMSEGIPLTDDDRWPWLDLIGAELRNGSEGKGVLVSCSALKKI YRDRLREATGGPLAFVYLDGSLELLSRRMGERKGHFMPLSLLQTQLATLEVPTGEPGVVTVSIDSTPEEIVANALAGLKT LKF
Specific function: Gluconate utilization system GNT-I. [C]
COG id: COG3265
COG function: function code G; Gluconate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gluconokinase gntK/gntV family [H]
Homologues:
Organism=Homo sapiens, GI299758445, Length=177, Percent_Identity=43.5028248587571, Blast_Score=137, Evalue=6e-33, Organism=Escherichia coli, GI87082265, Length=162, Percent_Identity=46.9135802469136, Blast_Score=140, Evalue=6e-35, Organism=Escherichia coli, GI1790719, Length=147, Percent_Identity=46.2585034013605, Blast_Score=128, Evalue=2e-31, Organism=Caenorhabditis elegans, GI25146487, Length=150, Percent_Identity=45.3333333333333, Blast_Score=126, Evalue=6e-30, Organism=Saccharomyces cerevisiae, GI6320454, Length=141, Percent_Identity=39.7163120567376, Blast_Score=110, Evalue=9e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR006001 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.12 [H]
Molecular weight: Translated: 17481; Mature: 17481
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMGVSGSGKSTVAEGLAEKLGIAFIEGDKLHPKSNVDKMSEGIPLTDDDRWPWLDLIGAE CCCCCCCCHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHH LRNGSEGKGVLVSCSALKKIYRDRLREATGGPLAFVYLDGSLELLSRRMGERKGHFMPLS HCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCHH LLQTQLATLEVPTGEPGVVTVSIDSTPEEIVANALAGLKTLKF HHHHHHHEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMGVSGSGKSTVAEGLAEKLGIAFIEGDKLHPKSNVDKMSEGIPLTDDDRWPWLDLIGAE CCCCCCCCHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHH LRNGSEGKGVLVSCSALKKIYRDRLREATGGPLAFVYLDGSLELLSRRMGERKGHFMPLS HCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCHH LLQTQLATLEVPTGEPGVVTVSIDSTPEEIVANALAGLKTLKF HHHHHHHEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9135111; 9278503; 8655507; 11468405 [H]