Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is phnI [H]
Identifier: 15887533
GI number: 15887533
Start: 182758
End: 183867
Strand: Reverse
Name: phnI [H]
Synonym: Atu0179
Alternate gene names: 15887533
Gene position: 183867-182758 (Counterclockwise)
Preceding gene: 15887534
Following gene: 15887532
Centisome position: 6.47
GC content: 62.7
Gene sequence:
>1110_bases ATGTATGTTGCAGTCAAAGGCGGGGAGACCGCCATCGCCAATGCTCACCGGCTGCTGGCCGACCAGCGGCGCGGAGACCG CGACCTGCCCGCCATGACCGTGGCGCAGATCGTTTCGCAGCTGTCGCTCGCCGTCGACCGCGTGATGGCGGAAGCCTCGC TCTACGACCAGTCGCTTGCGGCCCTTGCCGTCAAGCAGGCGCGCGGCGACATGATCGAAGCCATCTTCCTGCTGCGCGCC TATCGCACCACGCTGCCGCGCTTCGGCTATTCGGTTCCGGTGGATACCGCTGACATGGTGGTACAGCGGCGTGTTTCCGC AACCTATAAGGATCTGCCCGGCGGGCAATTGCTGGGTCCGACCTTCGACTACACCCACCGGCTGCTCGATCCCTCCCTCC TCGAAGACGAGGGCGTCGAAACCGCTACCCAGCGGGAAGGTGAGCCGGAATACGTCGTGCGCGTTTCCGATATCCTCGCC CAGGAGGGGCTGATCGAAAGCGACGGCGACATGCCGGACGATCATATTGCCGGCGACCTGACACGGGAACCGATGGAGTT TCCCATGCCGCGTGATCTGCGCCTGCAATCACTGGCGCGCGGCGACGAAGGTTTCCTTCTGGCGCTCGCCTATTCGACGC AGCGCGGTTACGGCCGCACCCACCCCTTCGTCGGCGAAATCCGCATCGGTGAGGTGGAAGTCGAGCTTGATGTGCCGGAA CTCGGCTTTTCCGTCTCGCTCGGCGATATCAAGGTCACCGAATGCCAGATGGTCAACCAGTTCAAGGGTTCAGCCAAGGC ACCGCCGCAATTTACGCGTGGTTACGGCCTGGTCTTCGGCCAGAGCGAACGCAAGGCGATGGCGATGTCGCTCGTCGATC GGGCGTTGCGCGCCGGCGAATTCGGCGAAGATGTCGTCGCCCCTGCGCAGGACGAGGAATTCGTCATCTCACATGCCGAC AATGTGCAGGCGACAGGTTTCGTCGAGCATCTGAAACTGCCGCATTACGTGGATTTTCAGGCCGAACTCGGTCTGGTGCG CAAGATGCGCGCCGATTTCGAGGCAATCAACGCCAATGGCGCGGAATGGATGAGCGATGCGGCCGAATAG
Upstream 100 bases:
>100_bases AACGCCATCTTCCCGCGCGGCGTCGATGTCATCCTGACCGCTGGCGATAAATTCGTCTGCCTGCCGCGTACGACGCGCAT CAAACCCGTGGAGGCATAAG
Downstream 100 bases:
>100_bases CTCAGCGGCTGTGCTGCTCGCCAAACCAGAAGGCGCAAAAGACGGTCGATGCTGCAAAGACAGCAAAGAACACGGCTGCA AGAATTCCAATCTCCATGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MYVAVKGGETAIANAHRLLADQRRGDRDLPAMTVAQIVSQLSLAVDRVMAEASLYDQSLAALAVKQARGDMIEAIFLLRA YRTTLPRFGYSVPVDTADMVVQRRVSATYKDLPGGQLLGPTFDYTHRLLDPSLLEDEGVETATQREGEPEYVVRVSDILA QEGLIESDGDMPDDHIAGDLTREPMEFPMPRDLRLQSLARGDEGFLLALAYSTQRGYGRTHPFVGEIRIGEVEVELDVPE LGFSVSLGDIKVTECQMVNQFKGSAKAPPQFTRGYGLVFGQSERKAMAMSLVDRALRAGEFGEDVVAPAQDEEFVISHAD NVQATGFVEHLKLPHYVDFQAELGLVRKMRADFEAINANGAEWMSDAAE
Sequences:
>Translated_369_residues MYVAVKGGETAIANAHRLLADQRRGDRDLPAMTVAQIVSQLSLAVDRVMAEASLYDQSLAALAVKQARGDMIEAIFLLRA YRTTLPRFGYSVPVDTADMVVQRRVSATYKDLPGGQLLGPTFDYTHRLLDPSLLEDEGVETATQREGEPEYVVRVSDILA QEGLIESDGDMPDDHIAGDLTREPMEFPMPRDLRLQSLARGDEGFLLALAYSTQRGYGRTHPFVGEIRIGEVEVELDVPE LGFSVSLGDIKVTECQMVNQFKGSAKAPPQFTRGYGLVFGQSERKAMAMSLVDRALRAGEFGEDVVAPAQDEEFVISHAD NVQATGFVEHLKLPHYVDFQAELGLVRKMRADFEAINANGAEWMSDAAE >Mature_369_residues MYVAVKGGETAIANAHRLLADQRRGDRDLPAMTVAQIVSQLSLAVDRVMAEASLYDQSLAALAVKQARGDMIEAIFLLRA YRTTLPRFGYSVPVDTADMVVQRRVSATYKDLPGGQLLGPTFDYTHRLLDPSLLEDEGVETATQREGEPEYVVRVSDILA QEGLIESDGDMPDDHIAGDLTREPMEFPMPRDLRLQSLARGDEGFLLALAYSTQRGYGRTHPFVGEIRIGEVEVELDVPE LGFSVSLGDIKVTECQMVNQFKGSAKAPPQFTRGYGLVFGQSERKAMAMSLVDRALRAGEFGEDVVAPAQDEEFVISHAD NVQATGFVEHLKLPHYVDFQAELGLVRKMRADFEAINANGAEWMSDAAE
Specific function: Belongs to an operon involved in utilization of glyphosate and other phosphonates [H]
COG id: COG3626
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnI family [H]
Homologues:
Organism=Escherichia coli, GI1790537, Length=355, Percent_Identity=60.5633802816901, Blast_Score=421, Evalue=1e-119,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008773 [H]
Pfam domain/function: PF05861 PhnI [H]
EC number: NA
Molecular weight: Translated: 40613; Mature: 40613
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVAVKGGETAIANAHRLLADQRRGDRDLPAMTVAQIVSQLSLAVDRVMAEASLYDQSLA CEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAVKQARGDMIEAIFLLRAYRTTLPRFGYSVPVDTADMVVQRRVSATYKDLPGGQLLGP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC TFDYTHRLLDPSLLEDEGVETATQREGEPEYVVRVSDILAQEGLIESDGDMPDDHIAGDL CHHHHHHHCCCHHHCCCCCCHHHHCCCCCCEEEEHHHHHHHCCCCCCCCCCCCHHHCCCC TREPMEFPMPRDLRLQSLARGDEGFLLALAYSTQRGYGRTHPFVGEIRIGEVEVELDVPE CCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEECCCC LGFSVSLGDIKVTECQMVNQFKGSAKAPPQFTRGYGLVFGQSERKAMAMSLVDRALRAGE CCCEEEECCEEEHHHHHHHHHCCCCCCCCCHHCCEEEEECCCHHHHHHHHHHHHHHHCCC FGEDVVAPAQDEEFVISHADNVQATGFVEHLKLPHYVDFQAELGLVRKMRADFEAINANG CCCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHCCCC AEWMSDAAE HHHHHHCCC >Mature Secondary Structure MYVAVKGGETAIANAHRLLADQRRGDRDLPAMTVAQIVSQLSLAVDRVMAEASLYDQSLA CEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAVKQARGDMIEAIFLLRAYRTTLPRFGYSVPVDTADMVVQRRVSATYKDLPGGQLLGP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC TFDYTHRLLDPSLLEDEGVETATQREGEPEYVVRVSDILAQEGLIESDGDMPDDHIAGDL CHHHHHHHCCCHHHCCCCCCHHHHCCCCCCEEEEHHHHHHHCCCCCCCCCCCCHHHCCCC TREPMEFPMPRDLRLQSLARGDEGFLLALAYSTQRGYGRTHPFVGEIRIGEVEVELDVPE CCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEECCCC LGFSVSLGDIKVTECQMVNQFKGSAKAPPQFTRGYGLVFGQSERKAMAMSLVDRALRAGE CCCEEEECCEEEHHHHHHHHHCCCCCCCCCHHCCEEEEECCCHHHHHHHHHHHHHHHCCC FGEDVVAPAQDEEFVISHADNVQATGFVEHLKLPHYVDFQAELGLVRKMRADFEAINANG CCCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHCCCC AEWMSDAAE HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481431 [H]