Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is phnE [H]
Identifier: 15887525
GI number: 15887525
Start: 175086
End: 176435
Strand: Reverse
Name: phnE [H]
Synonym: Atu0171
Alternate gene names: 15887525
Gene position: 176435-175086 (Counterclockwise)
Preceding gene: 159184196
Following gene: 159184195
Centisome position: 6.21
GC content: 59.85
Gene sequence:
>1350_bases ATGTCGTCCAGCTTCATTCTCAACACCGCCGAGCGCGAGAGGCTGACGGCTGCACATCGCCATGTGTTCAACCGCAGTTT CATGCAACGATATGGTCTGCTCGTCGGCCTTCTCGTCGCCACCGCCTATCTCATCGGCTGCTTTTTCTTCTTCAATGTCG GCCCGGCTTTCATGCAGGGCCGGTGGGATCGCGCTTCCAGCTATATTCAGGACTGGTATTCCTGGCGTGCCCAGCCGCGC CTGCGTTTCGAAGACGGCAAGGTCGCGCCGCAATGGTCGAGCCGCGGGCAATATCCGGCCGATGCGAAGATCGACTGGCT GCAGCCCCTGCCGGACGGCGGTTACAGCGTCGTTTATGCGGGCACACAAAACCGCCTCGATATAACGCCGACCCGGGTGG ATGTTTATGTCGACGGCAAGAACTACCCCGTCATCATCAACGACGATGCTGTTGTCGCGCCGCAGGGCCTGCCCGACGAA ATCCAGCAGGACGGCAAGAAGGTTCTCGTGCATTACGGTTTTGCCGGCCAGGCGGAAATCCGCACCAGCCAGGTCTATGT ACAGCGCCGCTTCCTTGGATGGGCGAACTTCCTGTTCGACACCAAATCTGAATTCTGGGGCAAGGGTTATGGCGAGCTTG CGGCTCTCGCGCTCTGGGGAGAGCGGCTCGATCCCGCGCGCTCCAATATCGGCCATATGGTCGATGATTTCCTCGACAAC AGCGTCTGGCAACATGCCGATATCCTGTCCAAGCTGATGCAGACGCTGGTCATGGCATTTGTCGGCACGCTGTTCGGCAC GCTTGTCGCCCTGCCGCTCGCCTTCATCGCAGCGCGCAACATCACCGCCAACAGGGCGGCAAACTGGGGCATGAAGCGCC TGTTCGATTTCCTGCGTTCCATCGACATGCTGATCTGGGCGCTGTTCTTCACCCGCAGTTTCGGCCCGGGACCGATCCCG GGAATTGCCGCGATCTTCTTCACCGATACCGGCGCGCTCGGCAAGGTCTATGCCGAGGCGCTGGAAAATGTCGACGACAA GCAGCGCGAGGGCGTCAAGTCGGTCGGCGCATCCCCGATTGCGGTCAACCGCTTCGGCGTGTTGCCGCAGGTGTTGCCGG TCTTCATTTCCCAATCGCTGTATTTCTGGGAAAGCAATACCCGCTCCGCCACGATCATCGGTGCGGTGGGTGCCGGCGGC ATCGGCCTGAAACTGCTGGAAGCGATGGGTACCAATGCCGACTGGGACAAGGTCGCCTATATGGTCCTGCTCATCCTCTT CGTCGTCTTCCTGTTCGACCATATTTCCAATTCGCTGCGTTCGCGCCTGATCGGTAAAACACAGCACTAG
Upstream 100 bases:
>100_bases TTCTGCTGATCACCATCATCGCCGTCGACCAGTTCTCCAGCTGGCTGCGCCGCAGACTGATCGGCCAACAATCCTTCGAA TTCGGACGGGGAGCGGCCTG
Downstream 100 bases:
>100_bases GCCCAAGCGGGCGGGATAACGAAAGTCGCGATGACGTTCGTTATCCCGCACCGCGCACGCTCACGCAGTCCTGGTTTGCG CTGGCCATATCTCCTCACCA
Product: ABC transporter, membrane spanning protein (phosphonate)
Products: 3-phospho-serine [Cytoplasm]; phosphite [Cytoplasm]; ADP; phosphate [Cytoplasm]; alkylphosphonate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MSSSFILNTAERERLTAAHRHVFNRSFMQRYGLLVGLLVATAYLIGCFFFFNVGPAFMQGRWDRASSYIQDWYSWRAQPR LRFEDGKVAPQWSSRGQYPADAKIDWLQPLPDGGYSVVYAGTQNRLDITPTRVDVYVDGKNYPVIINDDAVVAPQGLPDE IQQDGKKVLVHYGFAGQAEIRTSQVYVQRRFLGWANFLFDTKSEFWGKGYGELAALALWGERLDPARSNIGHMVDDFLDN SVWQHADILSKLMQTLVMAFVGTLFGTLVALPLAFIAARNITANRAANWGMKRLFDFLRSIDMLIWALFFTRSFGPGPIP GIAAIFFTDTGALGKVYAEALENVDDKQREGVKSVGASPIAVNRFGVLPQVLPVFISQSLYFWESNTRSATIIGAVGAGG IGLKLLEAMGTNADWDKVAYMVLLILFVVFLFDHISNSLRSRLIGKTQH
Sequences:
>Translated_449_residues MSSSFILNTAERERLTAAHRHVFNRSFMQRYGLLVGLLVATAYLIGCFFFFNVGPAFMQGRWDRASSYIQDWYSWRAQPR LRFEDGKVAPQWSSRGQYPADAKIDWLQPLPDGGYSVVYAGTQNRLDITPTRVDVYVDGKNYPVIINDDAVVAPQGLPDE IQQDGKKVLVHYGFAGQAEIRTSQVYVQRRFLGWANFLFDTKSEFWGKGYGELAALALWGERLDPARSNIGHMVDDFLDN SVWQHADILSKLMQTLVMAFVGTLFGTLVALPLAFIAARNITANRAANWGMKRLFDFLRSIDMLIWALFFTRSFGPGPIP GIAAIFFTDTGALGKVYAEALENVDDKQREGVKSVGASPIAVNRFGVLPQVLPVFISQSLYFWESNTRSATIIGAVGAGG IGLKLLEAMGTNADWDKVAYMVLLILFVVFLFDHISNSLRSRLIGKTQH >Mature_448_residues SSSFILNTAERERLTAAHRHVFNRSFMQRYGLLVGLLVATAYLIGCFFFFNVGPAFMQGRWDRASSYIQDWYSWRAQPRL RFEDGKVAPQWSSRGQYPADAKIDWLQPLPDGGYSVVYAGTQNRLDITPTRVDVYVDGKNYPVIINDDAVVAPQGLPDEI QQDGKKVLVHYGFAGQAEIRTSQVYVQRRFLGWANFLFDTKSEFWGKGYGELAALALWGERLDPARSNIGHMVDDFLDNS VWQHADILSKLMQTLVMAFVGTLFGTLVALPLAFIAARNITANRAANWGMKRLFDFLRSIDMLIWALFFTRSFGPGPIPG IAAIFFTDTGALGKVYAEALENVDDKQREGVKSVGASPIAVNRFGVLPQVLPVFISQSLYFWESNTRSATIIGAVGAGGI GLKLLEAMGTNADWDKVAYMVLLILFVVFLFDHISNSLRSRLIGKTQH
Specific function: Part of the binding-protein-dependent transport system for phosphonates; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG3639
COG function: function code P; ABC-type phosphate/phosphonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005769 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 50198; Mature: 50067
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSFILNTAERERLTAAHRHVFNRSFMQRYGLLVGLLVATAYLIGCFFFFNVGPAFMQG CCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC RWDRASSYIQDWYSWRAQPRLRFEDGKVAPQWSSRGQYPADAKIDWLQPLPDGGYSVVYA CHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE GTQNRLDITPTRVDVYVDGKNYPVIINDDAVVAPQGLPDEIQQDGKKVLVHYGFAGQAEI CCCCCEECCCCEEEEEECCCCCCEEECCCCEECCCCCCHHHHCCCCEEEEEECCCCCCHH RTSQVYVQRRFLGWANFLFDTKSEFWGKGYGELAALALWGERLDPARSNIGHMVDDFLDN HHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH SVWQHADILSKLMQTLVMAFVGTLFGTLVALPLAFIAARNITANRAANWGMKRLFDFLRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHH IDMLIWALFFTRSFGPGPIPGIAAIFFTDTGALGKVYAEALENVDDKQREGVKSVGASPI HHHHHHHHHHHCCCCCCCCCHHEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCE AVNRFGVLPQVLPVFISQSLYFWESNTRSATIIGAVGAGGIGLKLLEAMGTNADWDKVAY EEHHHCCHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHH MVLLILFVVFLFDHISNSLRSRLIGKTQH HHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SSSFILNTAERERLTAAHRHVFNRSFMQRYGLLVGLLVATAYLIGCFFFFNVGPAFMQG CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC RWDRASSYIQDWYSWRAQPRLRFEDGKVAPQWSSRGQYPADAKIDWLQPLPDGGYSVVYA CHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE GTQNRLDITPTRVDVYVDGKNYPVIINDDAVVAPQGLPDEIQQDGKKVLVHYGFAGQAEI CCCCCEECCCCEEEEEECCCCCCEEECCCCEECCCCCCHHHHCCCCEEEEEECCCCCCHH RTSQVYVQRRFLGWANFLFDTKSEFWGKGYGELAALALWGERLDPARSNIGHMVDDFLDN HHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH SVWQHADILSKLMQTLVMAFVGTLFGTLVALPLAFIAARNITANRAANWGMKRLFDFLRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHH IDMLIWALFFTRSFGPGPIPGIAAIFFTDTGALGKVYAEALENVDDKQREGVKSVGASPI HHHHHHHHHHHCCCCCCCCCHHEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCE AVNRFGVLPQVLPVFISQSLYFWESNTRSATIIGAVGAGGIGLKLLEAMGTNADWDKVAY EEHHHCCHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHH MVLLILFVVFLFDHISNSLRSRLIGKTQH HHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; 3-phospho-serine [Periplasm]; phosphite [Periplasm]; H2O; phosphate [Periplasm]; alkylphosphonate [Periplasm] [C]
Specific reaction: H2O + ATP + 3-phospho-serine [Periplasm] = ADP + phosphate + 3-phospho-serine [Cytoplasm] ATP + phosphite [Periplasm] + H2O = phosphite [Cytoplasm] + ADP + phosphate phosphate [Periplasm] + ATP + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] A
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]