Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15887464
Identifier: 15887464
GI number: 15887464
Start: 112724
End: 113134
Strand: Reverse
Name: 15887464
Synonym: Atu8081
Alternate gene names: NA
Gene position: 113134-112724 (Counterclockwise)
Preceding gene: 15887475
Following gene: 159184161
Centisome position: 3.98
GC content: 48.42
Gene sequence:
>411_bases ATGTCCAAAGTTTCTATATTTAAGGCCTATTTCGGAGCAGTTTTTCTCACCGCCATAATCGCGATTGCCGCTTGGTGGCA GGGGGATAACGCAACAACGATTTTTCACAAAGCCCTCGTCGTGCCGCTTTACCTGTTAGCGAGCACGGGTCTGCGCAGCT ATTTCCCAGAGATATTCGACTCTAAACGCGGTATTTTGGGCACGCTTGAGTTTCACATCCTTAATTCAGCGATCCTGGCG GCATTCTTCATTCTTGTACTCCGTCCTTTTCCAGACGACATTGGCAACCAGCTAGTATCTTTCTTCTTCTTGATCGCCTT TACGGGGACCGCCAATTTCGCAAGGGCGATGCACGCGAGGAAGAAAAATCAATACAGCGACCAAACGTCACCACACCTTA CCGATTTGTAA
Upstream 100 bases:
>100_bases TTTTTTCATGGGTAGCATGGATAGCGCGCCAGAGGTGAAAGGTCTATCGTCGAGATCAGATGCGAGGCTATATCTTTGAT GATTTCTAGGGAAAAAGCCG
Downstream 100 bases:
>100_bases TCCGCTCTTCCCTTGAAAAGCCGCATTTGCACACACATTTCTTAGAGGACGGCGCCTGATCACGCCGTAGTCTGATAGCT GGCTCGTCCCCCGCCGCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MSKVSIFKAYFGAVFLTAIIAIAAWWQGDNATTIFHKALVVPLYLLASTGLRSYFPEIFDSKRGILGTLEFHILNSAILA AFFILVLRPFPDDIGNQLVSFFFLIAFTGTANFARAMHARKKNQYSDQTSPHLTDL
Sequences:
>Translated_136_residues MSKVSIFKAYFGAVFLTAIIAIAAWWQGDNATTIFHKALVVPLYLLASTGLRSYFPEIFDSKRGILGTLEFHILNSAILA AFFILVLRPFPDDIGNQLVSFFFLIAFTGTANFARAMHARKKNQYSDQTSPHLTDL >Mature_135_residues SKVSIFKAYFGAVFLTAIIAIAAWWQGDNATTIFHKALVVPLYLLASTGLRSYFPEIFDSKRGILGTLEFHILNSAILAA FFILVLRPFPDDIGNQLVSFFFLIAFTGTANFARAMHARKKNQYSDQTSPHLTDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15194; Mature: 15063
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVSIFKAYFGAVFLTAIIAIAAWWQGDNATTIFHKALVVPLYLLASTGLRSYFPEIFD CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHC SKRGILGTLEFHILNSAILAAFFILVLRPFPDDIGNQLVSFFFLIAFTGTANFARAMHAR CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH KKNQYSDQTSPHLTDL HHHCCCCCCCCCCCCC >Mature Secondary Structure SKVSIFKAYFGAVFLTAIIAIAAWWQGDNATTIFHKALVVPLYLLASTGLRSYFPEIFD CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHC SKRGILGTLEFHILNSAILAAFFILVLRPFPDDIGNQLVSFFFLIAFTGTANFARAMHAR CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH KKNQYSDQTSPHLTDL HHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA