Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is pheA [H]
Identifier: 15887453
GI number: 15887453
Start: 103016
End: 103879
Strand: Reverse
Name: pheA [H]
Synonym: Atu0099
Alternate gene names: 15887453
Gene position: 103879-103016 (Counterclockwise)
Preceding gene: 15887454
Following gene: 15887450
Centisome position: 3.66
GC content: 57.29
Gene sequence:
>864_bases ATGAATTTGATTACAAATCGCATTGCCTTTCAGGGCGAGTTCGGCGCGAATTCCGACATGGCATGCCGTGACATGTTTCC GGATATGGAGCCATTGCCATGCCCGACATTCGAGGATGCCTTCAACGCTATCGAAAATGGCGAAGCCGATCTCGGCATGA TCCCGATTGAAAACACGCTGGCCGGCCGAGTCGCGGATATTCATCACCTGCTGCCCGAATCACGCCTGCACATCATCGGC GAATATTTCATGCCGATCCGTTTCCAGCTGATGGTGGTGCCGGGCGTGACGAAAGACGAGATCCGCACCGTCCACAGCCA TATCCATGCACTGGGCCAGTGCCGCAAGATCATCCGTTCGAACGGCTGGAAGCCCGTCATCGCCGGCGATACGGCGGGCT CCGCAAGGCTGGTTTCCGAAAAGGGCGACCGCAGCATGGCGGCTCTCGCGCCGCGTCTTGCCGCGGATCTCTACGGTCTC GATATTCTCGCTGAAAATGTCGAGGATTCGGAAAACAACGTTACGCGCTTCGTCGTGCTCTCCCGCGATGAGAACTGGGC CAAGCGTCAGTCGAGCGACGAAATTGTCGTCACGACTTTTGTCTTCAATGTTCGCAACATTCCGGCCGCGCTCTACAAGG CCATGGGCGGTTTTGCCACCAACGGCATCAATATGACGAAGCTCGAAAGCTACCAGCTCGGCGGCAAATTCGTGGCGACG CAGTTTTATGCCGATATTGAAGGCCACCCCGATGACGAACCGGTGCGGCATGCGCTGGACGAGCTGCGCTTCTTCTCGGA AAAAGTCCGCATTCTCGGCGTCTACAACGGCCATGCGATGCGCGGCAAGCTCAACCAGAGCTGA
Upstream 100 bases:
>100_bases CGGAAATCGTCCGGTCTGTTCCGCTTGGCGTCGACACGCCGCACGATCTCGAAAAAGCCCGCAAGATTCTTGCAGGCAGA ACCCTCTAACGGACAGTCCC
Downstream 100 bases:
>100_bases GCCTGCCGCAACCCCTCACTCGGGCCATTCCACCCAGTCGCGCATCAGCCGATGCGCGATGGCGCCGATCGGCGGGGCTG AAAAACCTTCCCCCGCCGGG
Product: prephenate dehydratase
Products: NA
Alternate protein names: Chorismate mutase; CM; Prephenate dehydratase; PDT [H]
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MNLITNRIAFQGEFGANSDMACRDMFPDMEPLPCPTFEDAFNAIENGEADLGMIPIENTLAGRVADIHHLLPESRLHIIG EYFMPIRFQLMVVPGVTKDEIRTVHSHIHALGQCRKIIRSNGWKPVIAGDTAGSARLVSEKGDRSMAALAPRLAADLYGL DILAENVEDSENNVTRFVVLSRDENWAKRQSSDEIVVTTFVFNVRNIPAALYKAMGGFATNGINMTKLESYQLGGKFVAT QFYADIEGHPDDEPVRHALDELRFFSEKVRILGVYNGHAMRGKLNQS
Sequences:
>Translated_287_residues MNLITNRIAFQGEFGANSDMACRDMFPDMEPLPCPTFEDAFNAIENGEADLGMIPIENTLAGRVADIHHLLPESRLHIIG EYFMPIRFQLMVVPGVTKDEIRTVHSHIHALGQCRKIIRSNGWKPVIAGDTAGSARLVSEKGDRSMAALAPRLAADLYGL DILAENVEDSENNVTRFVVLSRDENWAKRQSSDEIVVTTFVFNVRNIPAALYKAMGGFATNGINMTKLESYQLGGKFVAT QFYADIEGHPDDEPVRHALDELRFFSEKVRILGVYNGHAMRGKLNQS >Mature_287_residues MNLITNRIAFQGEFGANSDMACRDMFPDMEPLPCPTFEDAFNAIENGEADLGMIPIENTLAGRVADIHHLLPESRLHIIG EYFMPIRFQLMVVPGVTKDEIRTVHSHIHALGQCRKIIRSNGWKPVIAGDTAGSARLVSEKGDRSMAALAPRLAADLYGL DILAENVEDSENNVTRFVVLSRDENWAKRQSSDEIVVTTFVFNVRNIPAALYKAMGGFATNGINMTKLESYQLGGKFVAT QFYADIEGHPDDEPVRHALDELRFFSEKVRILGVYNGHAMRGKLNQS
Specific function: L-phenylalanine biosynthesis. [C]
COG id: COG0077
COG function: function code E; Prephenate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate dehydratase domain [H]
Homologues:
Organism=Escherichia coli, GI1788951, Length=275, Percent_Identity=32, Blast_Score=130, Evalue=7e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008242 - InterPro: IPR002701 - InterPro: IPR020822 - InterPro: IPR010952 - InterPro: IPR001086 - InterPro: IPR018528 [H]
Pfam domain/function: PF01817 CM_2; PF00800 PDT [H]
EC number: =5.4.99.5; =4.2.1.51 [H]
Molecular weight: Translated: 31923; Mature: 31923
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: PS00857 PREPHENATE_DEHYDR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLITNRIAFQGEFGANSDMACRDMFPDMEPLPCPTFEDAFNAIENGEADLGMIPIENTL CCCCCCCEEEECCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCHHH AGRVADIHHLLPESRLHIIGEYFMPIRFQLMVVPGVTKDEIRTVHSHIHALGQCRKIIRS HHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC NGWKPVIAGDTAGSARLVSEKGDRSMAALAPRLAADLYGLDILAENVEDSENNVTRFVVL CCCCEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE SRDENWAKRQSSDEIVVTTFVFNVRNIPAALYKAMGGFATNGINMTKLESYQLGGKFVAT ECCCCHHHHCCCCCEEEEEEEEEHHCCHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEE QFYADIEGHPDDEPVRHALDELRFFSEKVRILGVYNGHAMRGKLNQS EEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCEECCCCCCC >Mature Secondary Structure MNLITNRIAFQGEFGANSDMACRDMFPDMEPLPCPTFEDAFNAIENGEADLGMIPIENTL CCCCCCCEEEECCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCHHH AGRVADIHHLLPESRLHIIGEYFMPIRFQLMVVPGVTKDEIRTVHSHIHALGQCRKIIRS HHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC NGWKPVIAGDTAGSARLVSEKGDRSMAALAPRLAADLYGLDILAENVEDSENNVTRFVVL CCCCEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE SRDENWAKRQSSDEIVVTTFVFNVRNIPAALYKAMGGFATNGINMTKLESYQLGGKFVAT ECCCCHHHHCCCCCEEEEEEEEEHHCCHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEE QFYADIEGHPDDEPVRHALDELRFFSEKVRILGVYNGHAMRGKLNQS EEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]