Click here to switch to the map view.

The map label for this gene is nrdI

Identifier: 15887422

GI number: 15887422

Start: 71188

End: 71586

Strand: Direct

Name: nrdI

Synonym: Atu0069

Alternate gene names: 15887422

Gene position: 71188-71586 (Clockwise)

Preceding gene: 159184146

Following gene: 159184147

Centisome position: 2.51

GC content: 56.64

Gene sequence:

>399_bases
ATGGGCCTGATCGTCTATTATTCCAGCCGTTCTGAAAACACCCATCGTTTCCTTCTGAAACTGGAACGGCGTTTGTTTCG
CCTGCCGCTTGGCGCTGAGGAAGATGTGCCTCAGGTGTCGGAGCCCTATGTGCTCGTTACTCCCACCTACGGCGGCGGCG
GCACGAAAGGGGCCGTGCCGAAGCCGGTCATCCGGTTTTTGAACGAGCCCTCCAACCGAAATCTCATTCGCGGTGTCATC
GCGGCGGGCAACACGAATTTTGGCGCAGCTTTCGCATCCGCCGGAGATATCGTCTCGCGCAAATGCGCGGTGCCGTTTCT
CTATCGTTTCGAGCTTCTCGGCACGGAAGAAGATGTCGCCAACGTCAAACATGGATTGGAACGATTTTGGACACGCTGA

Upstream 100 bases:

>100_bases
CTCGGCTACATGCAGGTTCCCGTCGTCGTCGCTGGCGAGCGCCATTGGGCAGGTTTCCGGCCTGATATGATCGGCTCGAT
CAGCTGAGGCGGCGGGGGCG

Downstream 100 bases:

>100_bases
CCTCAAGCGCGCTGCGCAAGGATGCCAAACAGCCCGTAGCCGCAAGCCAGAAACCGGTTGATACGGGACTGGATTATCAC
GCGCTGAACGCGATGCTGAA

Product: ribonucleotide reductase stimulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MGLIVYYSSRSENTHRFLLKLERRLFRLPLGAEEDVPQVSEPYVLVTPTYGGGGTKGAVPKPVIRFLNEPSNRNLIRGVI
AAGNTNFGAAFASAGDIVSRKCAVPFLYRFELLGTEEDVANVKHGLERFWTR

Sequences:

>Translated_132_residues
MGLIVYYSSRSENTHRFLLKLERRLFRLPLGAEEDVPQVSEPYVLVTPTYGGGGTKGAVPKPVIRFLNEPSNRNLIRGVI
AAGNTNFGAAFASAGDIVSRKCAVPFLYRFELLGTEEDVANVKHGLERFWTR
>Mature_131_residues
GLIVYYSSRSENTHRFLLKLERRLFRLPLGAEEDVPQVSEPYVLVTPTYGGGGTKGAVPKPVIRFLNEPSNRNLIRGVIA
AGNTNFGAAFASAGDIVSRKCAVPFLYRFELLGTEEDVANVKHGLERFWTR

Specific function: Probably involved in ribonucleotide reductase function

COG id: COG1780

COG function: function code F; Protein involved in ribonucleotide reduction

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nrdI family

Homologues:

Organism=Escherichia coli, GI1789029, Length=132, Percent_Identity=57.5757575757576, Blast_Score=166, Evalue=4e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NRDI_AGRT5 (Q8UJ69)

Other databases:

- EMBL:   AE007869
- PIR:   AH2584
- PIR:   G97366
- RefSeq:   NP_353103.1
- ProteinModelPortal:   Q8UJ69
- SMR:   Q8UJ69
- STRING:   Q8UJ69
- GeneID:   1132107
- GenomeReviews:   AE007869_GR
- KEGG:   atu:Atu0069
- eggNOG:   COG1780
- HOGENOM:   HBG697191
- OMA:   FELMGTA
- PhylomeDB:   Q8UJ69
- ProtClustDB:   PRK03600
- BioCyc:   ATUM176299-1:ATU0069-MONOMER
- HAMAP:   MF_00128
- InterPro:   IPR020852
- InterPro:   IPR004465
- PIRSF:   PIRSF005087
- TIGRFAMs:   TIGR00333

Pfam domain/function: PF07972 Flavodoxin_NdrI

EC number: NA

Molecular weight: Translated: 14671; Mature: 14540

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLIVYYSSRSENTHRFLLKLERRLFRLPLGAEEDVPQVSEPYVLVTPTYGGGGTKGAVP
CCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC
KPVIRFLNEPSNRNLIRGVIAAGNTNFGAAFASAGDIVSRKCAVPFLYRFELLGTEEDVA
HHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHCCCHHHHHHCCCCCEEEEEECCCHHHHH
NVKHGLERFWTR
HHHHHHHHHCCC
>Mature Secondary Structure 
GLIVYYSSRSENTHRFLLKLERRLFRLPLGAEEDVPQVSEPYVLVTPTYGGGGTKGAVP
CEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC
KPVIRFLNEPSNRNLIRGVIAAGNTNFGAAFASAGDIVSRKCAVPFLYRFELLGTEEDVA
HHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHCCCHHHHHHCCCCCEEEEEECCCHHHHH
NVKHGLERFWTR
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194