Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is nrdH [H]
Identifier: 159184146
GI number: 159184146
Start: 70953
End: 71174
Strand: Direct
Name: nrdH [H]
Synonym: Atu0068
Alternate gene names: 159184146
Gene position: 70953-71174 (Clockwise)
Preceding gene: 15887420
Following gene: 15887422
Centisome position: 2.5
GC content: 59.46
Gene sequence:
>222_bases ATGACCGTCACCGTTTACAGCAAGCCCGCCTGCGTCCAATGCACAGCCACCTATCGCGCGCTCGACCGCATCGGCGTTCC CTATGAGATTATCGACATTTCCGAAGATACGGATGCCCTCGATCATGTTCGCGGCCTCGGCTACATGCAGGTTCCCGTCG TCGTCGCTGGCGAGCGCCATTGGGCAGGTTTCCGGCCTGATATGATCGGCTCGATCAGCTGA
Upstream 100 bases:
>100_bases AGCCGCGCGCCTCGCCTGAATGACAGATCCATCGCCACCCGATTGCGATTGCAATCGGCAATGTTGAGCCGTGTCCGAAA TCGGCTTCGAAAGGGAAATT
Downstream 100 bases:
>100_bases GGCGGCGGGGGCGATGGGCCTGATCGTCTATTATTCCAGCCGTTCTGAAAACACCCATCGTTTCCTTCTGAAACTGGAAC GGCGTTTGTTTCGCCTGCCG
Product: glutaredoxin protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MTVTVYSKPACVQCTATYRALDRIGVPYEIIDISEDTDALDHVRGLGYMQVPVVVAGERHWAGFRPDMIGSIS
Sequences:
>Translated_73_residues MTVTVYSKPACVQCTATYRALDRIGVPYEIIDISEDTDALDHVRGLGYMQVPVVVAGERHWAGFRPDMIGSIS >Mature_72_residues TVTVYSKPACVQCTATYRALDRIGVPYEIIDISEDTDALDHVRGLGYMQVPVVVAGERHWAGFRPDMIGSIS
Specific function: Electron transport system for the ribonucleotide reductase system nrdEF [H]
COG id: COG0695
COG function: function code O; Glutaredoxin and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutaredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1789028, Length=72, Percent_Identity=43.0555555555556, Blast_Score=77, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011909 - InterPro: IPR002109 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00462 Glutaredoxin [H]
EC number: NA
Molecular weight: Translated: 8043; Mature: 7912
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTVYSKPACVQCTATYRALDRIGVPYEIIDISEDTDALDHVRGLGYMQVPVVVAGERH CEEEECCCCCEEEEHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCEEEEEEEECCCC WAGFRPDMIGSIS CCCCCCCCCCCCC >Mature Secondary Structure TVTVYSKPACVQCTATYRALDRIGVPYEIIDISEDTDALDHVRGLGYMQVPVVVAGERH EEEECCCCCEEEEHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCEEEEEEEECCCC WAGFRPDMIGSIS CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8820648; 11677609 [H]