Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is nrdH [H]

Identifier: 159184146

GI number: 159184146

Start: 70953

End: 71174

Strand: Direct

Name: nrdH [H]

Synonym: Atu0068

Alternate gene names: 159184146

Gene position: 70953-71174 (Clockwise)

Preceding gene: 15887420

Following gene: 15887422

Centisome position: 2.5

GC content: 59.46

Gene sequence:

>222_bases
ATGACCGTCACCGTTTACAGCAAGCCCGCCTGCGTCCAATGCACAGCCACCTATCGCGCGCTCGACCGCATCGGCGTTCC
CTATGAGATTATCGACATTTCCGAAGATACGGATGCCCTCGATCATGTTCGCGGCCTCGGCTACATGCAGGTTCCCGTCG
TCGTCGCTGGCGAGCGCCATTGGGCAGGTTTCCGGCCTGATATGATCGGCTCGATCAGCTGA

Upstream 100 bases:

>100_bases
AGCCGCGCGCCTCGCCTGAATGACAGATCCATCGCCACCCGATTGCGATTGCAATCGGCAATGTTGAGCCGTGTCCGAAA
TCGGCTTCGAAAGGGAAATT

Downstream 100 bases:

>100_bases
GGCGGCGGGGGCGATGGGCCTGATCGTCTATTATTCCAGCCGTTCTGAAAACACCCATCGTTTCCTTCTGAAACTGGAAC
GGCGTTTGTTTCGCCTGCCG

Product: glutaredoxin protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MTVTVYSKPACVQCTATYRALDRIGVPYEIIDISEDTDALDHVRGLGYMQVPVVVAGERHWAGFRPDMIGSIS

Sequences:

>Translated_73_residues
MTVTVYSKPACVQCTATYRALDRIGVPYEIIDISEDTDALDHVRGLGYMQVPVVVAGERHWAGFRPDMIGSIS
>Mature_72_residues
TVTVYSKPACVQCTATYRALDRIGVPYEIIDISEDTDALDHVRGLGYMQVPVVVAGERHWAGFRPDMIGSIS

Specific function: Electron transport system for the ribonucleotide reductase system nrdEF [H]

COG id: COG0695

COG function: function code O; Glutaredoxin and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1789028, Length=72, Percent_Identity=43.0555555555556, Blast_Score=77, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011909
- InterPro:   IPR002109
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 8043; Mature: 7912

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVTVYSKPACVQCTATYRALDRIGVPYEIIDISEDTDALDHVRGLGYMQVPVVVAGERH
CEEEECCCCCEEEEHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCEEEEEEEECCCC
WAGFRPDMIGSIS
CCCCCCCCCCCCC
>Mature Secondary Structure 
TVTVYSKPACVQCTATYRALDRIGVPYEIIDISEDTDALDHVRGLGYMQVPVVVAGERH
EEEECCCCCEEEEHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCEEEEEEEECCCC
WAGFRPDMIGSIS
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8820648; 11677609 [H]