Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15887404

Identifier: 15887404

GI number: 15887404

Start: 46716

End: 47681

Strand: Direct

Name: 15887404

Synonym: Atu0046

Alternate gene names: NA

Gene position: 46716-47681 (Clockwise)

Preceding gene: 15887403

Following gene: 15887405

Centisome position: 1.64

GC content: 57.04

Gene sequence:

>966_bases
GTGCGCAAAATTCTTCTGGCATTTGTCGTGGCTCTGGCGGTTTCCGCCGTTTCGTCTTCTTATGCCGAGGCCGCGACGGT
TGTTCCCCCGGGCAATCGCAATGCCGAACAGCCGGGTGTTCCCGGCGCTTCCGCCCGCAGAACCAAGGCGTCCAACAGCT
CTTTCGAACGCAAGTACCAGAAGGTGATCGACCTTTTGTCCTCCGACAAGGCGCTGATCGCCAAGATCAAGTCGACCGCC
GGACGCTACGGCATCGATCCAATTCATATGGTCGGCGCGATCGTCGGCGAACACACCTATAATGTCGACGCTTATGACCG
TCTGCAGTCCTATTACGTCAAGGCGGCCTCCTATGCCGGTAGCAGTTTCCGCTTCGGCTACAAGGATGAGACGATTGCGC
AGTTTCTGACGCATGCGCAATTTTCCAAATGCCAGGCGAAGAAGGATTCCTACAGCCTCTGGAACTGCCGCGAAGATGTC
TGGGACGACAGCTTCCGTGGCAAAACAGTCGACGGCGTGGCCTATCCGAACAACCGTTTCAGCGCCGTTTTCTTCCAGCC
ATTTTATGCCGGCCAGACCTTCGGCCTCGGCCAGATCAACCCGCTAACAGCGCTGATGCTGTCCGACATGGTGTCGAGAA
CCTCCGGTTACGAAAAGCTGGATGAAAACGATGCCACTGCCGTTTATACGGCTATCATGGATCCGGACCGCTCGCTCGCC
TTCATGGCAGCCTCCATCCGCAAGTCGATCGACGACTACCGATCGATCGCCGACATGGATATTTCGAAGAATCCTGGTGT
GACCTCCACGCTTTATAATGTCGGCGGTTCGCAGCAGCGTGCGGCTGCGCTTGCACAGAAGAACCGCCAACGCGCCGGAG
GCGGCGAGCAGCCGCTATTGCCGGAAGAAAATTATTACGGCTGGCTGGTAAACGACCGCATCAAGGATCTGCAGGCGCTT
TTGTAG

Upstream 100 bases:

>100_bases
TGGGAAGGGCTGCATTCCGGTTGGAACCGCTTTCGTGGAATGATCCGGTTTTCCCGCTTGTCATGCCGGGAAGGGCCGGC
TCGAGAAAAGGCAGTCGCTC

Downstream 100 bases:

>100_bases
AAAAAGACTATTATCCGCCATATTGTTTCCAAAAAGGAAATAATATTTGGCTGGATGCCGCGATTGACGAGCGACCGCCT
CAGCGTCCAATCTATGCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MRKILLAFVVALAVSAVSSSYAEAATVVPPGNRNAEQPGVPGASARRTKASNSSFERKYQKVIDLLSSDKALIAKIKSTA
GRYGIDPIHMVGAIVGEHTYNVDAYDRLQSYYVKAASYAGSSFRFGYKDETIAQFLTHAQFSKCQAKKDSYSLWNCREDV
WDDSFRGKTVDGVAYPNNRFSAVFFQPFYAGQTFGLGQINPLTALMLSDMVSRTSGYEKLDENDATAVYTAIMDPDRSLA
FMAASIRKSIDDYRSIADMDISKNPGVTSTLYNVGGSQQRAAALAQKNRQRAGGGEQPLLPEENYYGWLVNDRIKDLQAL
L

Sequences:

>Translated_321_residues
MRKILLAFVVALAVSAVSSSYAEAATVVPPGNRNAEQPGVPGASARRTKASNSSFERKYQKVIDLLSSDKALIAKIKSTA
GRYGIDPIHMVGAIVGEHTYNVDAYDRLQSYYVKAASYAGSSFRFGYKDETIAQFLTHAQFSKCQAKKDSYSLWNCREDV
WDDSFRGKTVDGVAYPNNRFSAVFFQPFYAGQTFGLGQINPLTALMLSDMVSRTSGYEKLDENDATAVYTAIMDPDRSLA
FMAASIRKSIDDYRSIADMDISKNPGVTSTLYNVGGSQQRAAALAQKNRQRAGGGEQPLLPEENYYGWLVNDRIKDLQAL
L
>Mature_321_residues
MRKILLAFVVALAVSAVSSSYAEAATVVPPGNRNAEQPGVPGASARRTKASNSSFERKYQKVIDLLSSDKALIAKIKSTA
GRYGIDPIHMVGAIVGEHTYNVDAYDRLQSYYVKAASYAGSSFRFGYKDETIAQFLTHAQFSKCQAKKDSYSLWNCREDV
WDDSFRGKTVDGVAYPNNRFSAVFFQPFYAGQTFGLGQINPLTALMLSDMVSRTSGYEKLDENDATAVYTAIMDPDRSLA
FMAASIRKSIDDYRSIADMDISKNPGVTSTLYNVGGSQQRAAALAQKNRQRAGGGEQPLLPEENYYGWLVNDRIKDLQAL
L

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35312; Mature: 35312

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKILLAFVVALAVSAVSSSYAEAATVVPPGNRNAEQPGVPGASARRTKASNSSFERKYQ
CHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHH
KVIDLLSSDKALIAKIKSTAGRYGIDPIHMVGAIVGEHTYNVDAYDRLQSYYVKAASYAG
HHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
SSFRFGYKDETIAQFLTHAQFSKCQAKKDSYSLWNCREDVWDDSFRGKTVDGVAYPNNRF
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHCCCCCCCCCCCCEECCCCCE
SAVFFQPFYAGQTFGLGQINPLTALMLSDMVSRTSGYEKLDENDATAVYTAIMDPDRSLA
EEEEECHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCEEEEEEECCCHHHH
FMAASIRKSIDDYRSIADMDISKNPGVTSTLYNVGGSQQRAAALAQKNRQRAGGGEQPLL
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC
PEENYYGWLVNDRIKDLQALL
CCCCCEEEEEHHHHHHHHHHC
>Mature Secondary Structure
MRKILLAFVVALAVSAVSSSYAEAATVVPPGNRNAEQPGVPGASARRTKASNSSFERKYQ
CHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHH
KVIDLLSSDKALIAKIKSTAGRYGIDPIHMVGAIVGEHTYNVDAYDRLQSYYVKAASYAG
HHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
SSFRFGYKDETIAQFLTHAQFSKCQAKKDSYSLWNCREDVWDDSFRGKTVDGVAYPNNRF
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHCCCCCCCCCCCCEECCCCCE
SAVFFQPFYAGQTFGLGQINPLTALMLSDMVSRTSGYEKLDENDATAVYTAIMDPDRSLA
EEEEECHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCEEEEEEECCCHHHH
FMAASIRKSIDDYRSIADMDISKNPGVTSTLYNVGGSQQRAAALAQKNRQRAGGGEQPLL
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC
PEENYYGWLVNDRIKDLQALL
CCCCCEEEEEHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA