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The map label for this gene is ycfF [C]

Identifier: 239618490

GI number: 239618490

Start: 2262952

End: 2263290

Strand: Direct

Name: ycfF [C]

Synonym: Kole_2131

Alternate gene names: 239618490

Gene position: 2262952-2263290 (Clockwise)

Preceding gene: 239618489

Following gene: 239618491

Centisome position: 98.3

GC content: 45.72

Gene sequence:

>339_bases
ATGAATTGTATTTTCTGTAAGATAATCGCTGGCGAGATACCAGCTGGCAAAGTTGCGGAAACGGAAAACTTCCTTGCTTT
CAGAGACATCAATCCCGTTGCTCCTGCACACATTCTGGTTGTTCCAAAGAAACACATGGAAAAACCTGGTGAATTGGCTC
TCCTAGACGGGGATATTCTCAAGGAACTTTTCAAACTCTTCCAGGATATAGCCGAAAAGGAAGGTATAGCGGAATCCGGG
TTCCGCACTCTCGTGAATACCGGGCCTGATTCCGGCCAGGAGGTTAAGCACCTCCATTTTCATATAATTGGTGGAAGAAA
ACTCGGAAAGATAGGGTGA

Upstream 100 bases:

>100_bases
CGAAAGATACGGGCAGAAACCGGCGAAGATTCTTGCTGAATTGCTGAGGACCCACGTTCTCGAAATTAAATGAATTTTCG
ATTTCGCAGGGAGGGATAAG

Downstream 100 bases:

>100_bases
ATAGATGAGTTTGGATAAGGATTTTGAGCATTATTATACATCGAAACCGACTTCACCTTTTAAGGTGAAGAAGGTTGTTC
TTTCTTTGAAAAACGGGAGA

Product: histidine triad (HIT) protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MNCIFCKIIAGEIPAGKVAETENFLAFRDINPVAPAHILVVPKKHMEKPGELALLDGDILKELFKLFQDIAEKEGIAESG
FRTLVNTGPDSGQEVKHLHFHIIGGRKLGKIG

Sequences:

>Translated_112_residues
MNCIFCKIIAGEIPAGKVAETENFLAFRDINPVAPAHILVVPKKHMEKPGELALLDGDILKELFKLFQDIAEKEGIAESG
FRTLVNTGPDSGQEVKHLHFHIIGGRKLGKIG
>Mature_112_residues
MNCIFCKIIAGEIPAGKVAETENFLAFRDINPVAPAHILVVPKKHMEKPGELALLDGDILKELFKLFQDIAEKEGIAESG
FRTLVNTGPDSGQEVKHLHFHIIGGRKLGKIG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=107, Percent_Identity=42.0560747663551, Blast_Score=84, Evalue=2e-17,
Organism=Homo sapiens, GI14211923, Length=106, Percent_Identity=36.7924528301887, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1787346, Length=107, Percent_Identity=42.9906542056075, Blast_Score=84, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17506713, Length=107, Percent_Identity=39.2523364485981, Blast_Score=83, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6320078, Length=104, Percent_Identity=38.4615384615385, Blast_Score=70, Evalue=7e-14,
Organism=Drosophila melanogaster, GI28574010, Length=107, Percent_Identity=36.4485981308411, Blast_Score=77, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24581222, Length=107, Percent_Identity=36.4485981308411, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 12243; Mature: 12243

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNCIFCKIIAGEIPAGKVAETENFLAFRDINPVAPAHILVVPKKHMEKPGELALLDGDIL
CCEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEEECHHHCCCCCCEEEECCHHH
KELFKLFQDIAEKEGIAESGFRTLVNTGPDSGQEVKHLHFHIIGGRKLGKIG
HHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MNCIFCKIIAGEIPAGKVAETENFLAFRDINPVAPAHILVVPKKHMEKPGELALLDGDIL
CCEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEEECHHHCCCCCCEEEECCHHH
KELFKLFQDIAEKEGIAESGFRTLVNTGPDSGQEVKHLHFHIIGGRKLGKIG
HHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]