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The map label for this gene is nusB [H]

Identifier: 239618474

GI number: 239618474

Start: 2248537

End: 2248983

Strand: Reverse

Name: nusB [H]

Synonym: Kole_2115

Alternate gene names: 239618474

Gene position: 2248983-2248537 (Counterclockwise)

Preceding gene: 239618475

Following gene: 239618473

Centisome position: 97.69

GC content: 40.94

Gene sequence:

>447_bases
ATGCCTAATCCCGGAACCGGTCAGAGAAGGAAAATAAGAGAAATTGTTTTCAGGTCGATTTTCCAGTACGATTTTCATAA
GGATTTTCCTGCTGCTATGGAGTATCTTGAGCGGGAAACAGCCTTTTATTCCCTGGACAAAGAAAGCAAAAACAGAGCTA
AAGGTTATCTTATGGGAATAATCGAGCACCTCGATGAAATTGACAGTATAATAACCGCATATCTGAAGAATTGGACCTTT
GATCGACTTGCTTCCATAGATAGGAGTGTTCTCAGGCTTGCAACTTATGAGCTTCTTTATGTAGATGACGTTCCTATCGA
GGTGACACTGAACGAAGCTATAGAGATAACAAAAAAATACGGTTCACAAGAAGAGGGGAAGTTCGTCAACGGTGTCCTGG
ACAAGATAGCTAAAGAGAGGGTTTCAGAAGAAAAGAGAGCCCTTTAA

Upstream 100 bases:

>100_bases
CGAAGAAGAGCCAGTTCCTGAGGTAAAAGAAGAACATCTAGAAGAACTGGAAAAACCGGAAGAAGAGAACGATACTTGAT
GCGAGGGATTGATTGAAAAA

Downstream 100 bases:

>100_bases
GAGGTGGAAGGTTATGAATGATGATCTAGCAATCGCTCAGGCCACAAAATTAAAGCCCATTGATGAAATAGCAGAATTTG
CGGGCATTGAACGTAAATAT

Product: transcription antitermination protein NusB

Products: NA

Alternate protein names: Protein nusB [H]

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MPNPGTGQRRKIREIVFRSIFQYDFHKDFPAAMEYLERETAFYSLDKESKNRAKGYLMGIIEHLDEIDSIITAYLKNWTF
DRLASIDRSVLRLATYELLYVDDVPIEVTLNEAIEITKKYGSQEEGKFVNGVLDKIAKERVSEEKRAL

Sequences:

>Translated_148_residues
MPNPGTGQRRKIREIVFRSIFQYDFHKDFPAAMEYLERETAFYSLDKESKNRAKGYLMGIIEHLDEIDSIITAYLKNWTF
DRLASIDRSVLRLATYELLYVDDVPIEVTLNEAIEITKKYGSQEEGKFVNGVLDKIAKERVSEEKRAL
>Mature_147_residues
PNPGTGQRRKIREIVFRSIFQYDFHKDFPAAMEYLERETAFYSLDKESKNRAKGYLMGIIEHLDEIDSIITAYLKNWTFD
RLASIDRSVLRLATYELLYVDDVPIEVTLNEAIEITKKYGSQEEGKFVNGVLDKIAKERVSEEKRAL

Specific function: Involved in the transcription termination process [H]

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family [H]

Homologues:

Organism=Escherichia coli, GI1786618, Length=81, Percent_Identity=41.9753086419753, Blast_Score=68, Evalue=2e-13,

Paralogues:

None

Copy number: 900 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011605
- InterPro:   IPR006027 [H]

Pfam domain/function: PF01029 NusB [H]

EC number: NA

Molecular weight: Translated: 17274; Mature: 17143

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNPGTGQRRKIREIVFRSIFQYDFHKDFPAAMEYLERETAFYSLDKESKNRAKGYLMGI
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
IEHLDEIDSIITAYLKNWTFDRLASIDRSVLRLATYELLYVDDVPIEVTLNEAIEITKKY
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEECCCCEEEEHHHHHHHHHHH
GSQEEGKFVNGVLDKIAKERVSEEKRAL
CCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PNPGTGQRRKIREIVFRSIFQYDFHKDFPAAMEYLERETAFYSLDKESKNRAKGYLMGI
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
IEHLDEIDSIITAYLKNWTFDRLASIDRSVLRLATYELLYVDDVPIEVTLNEAIEITKKY
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEECCCCEEEEHHHHHHHHHHH
GSQEEGKFVNGVLDKIAKERVSEEKRAL
CCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA