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The map label for this gene is 239618463

Identifier: 239618463

GI number: 239618463

Start: 2232888

End: 2234174

Strand: Reverse

Name: 239618463

Synonym: Kole_2104

Alternate gene names: NA

Gene position: 2234174-2232888 (Counterclockwise)

Preceding gene: 239618466

Following gene: 239618462

Centisome position: 97.05

GC content: 38.69

Gene sequence:

>1287_bases
ATGTTTTCAACAGGCTTTTCTGAAAAAATTGCTCTTGTGTTTTCTGGTGGAGGCGGTAGAGGAGCCTATGAAGTAGGTGT
CTGGAAAGCAGTGATGGATTTAGGAGAAGAGATAGGCGGCGTTTATGGTACCTCAGTTGGTGCGATTAACGGTGCCGGGG
TTGCTATGGGCGAGTTTGAACTGGCTAGGAAGCTCTGGTTGACAGCAACTTATGAGGATATAATGAAAATTTCACCAAAT
ATTAGACCGCTCTTTGAAGGCGATATCAAGAATCTCAAATTGAGCAGCATTGCCGAAGCTGTAAAAATGTTGTTTGAAGA
GTCTGGTATAGATGTATCTCCATTGAGAAAAAAATTAAGTGAGATTATATCTGAAGAGGAGATACGTTCATCCCCGATCG
ATTATGGACTCGTTGCCTACTCGGTTTCTAGCTTGTCTCCTGTTATGCTCTACATAGACGATATACCGGAAGGAATGCTT
ATAGATTATATACTGGCAAGTGCCAATTTCCCGGTATTCAAACGGGAAAACATAGGTGGAGCAAAATTTATTGATGGAGG
CGTTTATGCAAACATTCCGGTAGAAATGGCCATTAAAAAGGGTTTTAAAAAGATTGTAGTTGTCGATATAGGTACGTATG
GGATTGTTGATATTTTAAATCTGATCAAAGGCTTCACAAAATCGGATGAAGAGATTATTTACATAAAGCCCCGGGAGTAT
TATGGTGGAATACTAACTTTCGATCCGGAAGTCTCAAAAAAATATATGGCAGAAGGTTATCTCGATACATTGAAAGCTTA
TGGGATTCTACACGGTAATGTTTACTACATTTACCCGGGTGAAGATCTTATAGGAAAGTTCTTTATGAGTCTCGACGATC
AGCAACGCGCTCAGGCAATGGCCATCCTTGAAATCAAACCATTAGAAGATGCACCGGTTGCGTATCATTATTATCGACAG
GTATTACCTTACCTGGAATCAGCTTTTAAAACTTTCAACGCGCCTCCTAGGAAAACGTGCGAAGCTGTTTTAGAAAATAT
TGCCTCTTACCTTGAGATTAACAAATTAAGGCCATATTCTATTGAAGAATTATTTAAAACGATTGTTAATAGTGACGAGC
CTCAAACTACCCGTTCGACGCTTTTAAAATTAACCGTGGGCAAGAAGTACGATATGTTGATTGAATTTCTTAAATTTATC
TGGAACAACAGCAAACATGACGTAGAAATTTCAGAAGATTATAAAAGGATACGCTCTTCTTTTGAATCATTAATAACAAT
TCCTTAA

Upstream 100 bases:

>100_bases
ATGGTAGTATTTGTTATGGAGTGTCAAGCCAGCGAGAAAAGAGAATGGTGGTAAAATGATGAAATTAAAAATACTTATTA
TTTTTGGGGTGGGTATGATA

Downstream 100 bases:

>100_bases
TTTAAACCTCCTTGATTGGGCATTAATGATTCGAAAATCAAGCCCCTTTGAAAGTAATGTATAATGATTAGAGGTAGGGG
AGGTGGAACGGATGTCCGCA

Product: Patatin

Products: NA

Alternate protein names: Phospholipase Patatin Family; Patatin-Like Phospholipase; Phospholipase

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MFSTGFSEKIALVFSGGGGRGAYEVGVWKAVMDLGEEIGGVYGTSVGAINGAGVAMGEFELARKLWLTATYEDIMKISPN
IRPLFEGDIKNLKLSSIAEAVKMLFEESGIDVSPLRKKLSEIISEEEIRSSPIDYGLVAYSVSSLSPVMLYIDDIPEGML
IDYILASANFPVFKRENIGGAKFIDGGVYANIPVEMAIKKGFKKIVVVDIGTYGIVDILNLIKGFTKSDEEIIYIKPREY
YGGILTFDPEVSKKYMAEGYLDTLKAYGILHGNVYYIYPGEDLIGKFFMSLDDQQRAQAMAILEIKPLEDAPVAYHYYRQ
VLPYLESAFKTFNAPPRKTCEAVLENIASYLEINKLRPYSIEELFKTIVNSDEPQTTRSTLLKLTVGKKYDMLIEFLKFI
WNNSKHDVEISEDYKRIRSSFESLITIP

Sequences:

>Translated_428_residues
MFSTGFSEKIALVFSGGGGRGAYEVGVWKAVMDLGEEIGGVYGTSVGAINGAGVAMGEFELARKLWLTATYEDIMKISPN
IRPLFEGDIKNLKLSSIAEAVKMLFEESGIDVSPLRKKLSEIISEEEIRSSPIDYGLVAYSVSSLSPVMLYIDDIPEGML
IDYILASANFPVFKRENIGGAKFIDGGVYANIPVEMAIKKGFKKIVVVDIGTYGIVDILNLIKGFTKSDEEIIYIKPREY
YGGILTFDPEVSKKYMAEGYLDTLKAYGILHGNVYYIYPGEDLIGKFFMSLDDQQRAQAMAILEIKPLEDAPVAYHYYRQ
VLPYLESAFKTFNAPPRKTCEAVLENIASYLEINKLRPYSIEELFKTIVNSDEPQTTRSTLLKLTVGKKYDMLIEFLKFI
WNNSKHDVEISEDYKRIRSSFESLITIP
>Mature_428_residues
MFSTGFSEKIALVFSGGGGRGAYEVGVWKAVMDLGEEIGGVYGTSVGAINGAGVAMGEFELARKLWLTATYEDIMKISPN
IRPLFEGDIKNLKLSSIAEAVKMLFEESGIDVSPLRKKLSEIISEEEIRSSPIDYGLVAYSVSSLSPVMLYIDDIPEGML
IDYILASANFPVFKRENIGGAKFIDGGVYANIPVEMAIKKGFKKIVVVDIGTYGIVDILNLIKGFTKSDEEIIYIKPREY
YGGILTFDPEVSKKYMAEGYLDTLKAYGILHGNVYYIYPGEDLIGKFFMSLDDQQRAQAMAILEIKPLEDAPVAYHYYRQ
VLPYLESAFKTFNAPPRKTCEAVLENIASYLEINKLRPYSIEELFKTIVNSDEPQTTRSTLLKLTVGKKYDMLIEFLKFI
WNNSKHDVEISEDYKRIRSSFESLITIP

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47963; Mature: 47963

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSTGFSEKIALVFSGGGGRGAYEVGVWKAVMDLGEEIGGVYGTSVGAINGAGVAMGEFE
CCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCEEHHHHH
LARKLWLTATYEDIMKISPNIRPLFEGDIKNLKLSSIAEAVKMLFEESGIDVSPLRKKLS
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
EIISEEEIRSSPIDYGLVAYSVSSLSPVMLYIDDIPEGMLIDYILASANFPVFKRENIGG
HHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEEECCCCC
AKFIDGGVYANIPVEMAIKKGFKKIVVVDIGTYGIVDILNLIKGFTKSDEEIIYIKPREY
CEEECCCEEECCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEEECHHH
YGGILTFDPEVSKKYMAEGYLDTLKAYGILHGNVYYIYPGEDLIGKFFMSLDDQQRAQAM
HCCEEEECCHHHHHHHHHHHHHHHHHHEEEECCEEEEECCHHHHHHHHHCCCHHHHHHEE
AILEIKPLEDAPVAYHYYRQVLPYLESAFKTFNAPPRKTCEAVLENIASYLEINKLRPYS
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
IEELFKTIVNSDEPQTTRSTLLKLTVGKKYDMLIEFLKFIWNNSKHDVEISEDYKRIRSS
HHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
FESLITIP
HHHHCCCC
>Mature Secondary Structure
MFSTGFSEKIALVFSGGGGRGAYEVGVWKAVMDLGEEIGGVYGTSVGAINGAGVAMGEFE
CCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCEEHHHHH
LARKLWLTATYEDIMKISPNIRPLFEGDIKNLKLSSIAEAVKMLFEESGIDVSPLRKKLS
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
EIISEEEIRSSPIDYGLVAYSVSSLSPVMLYIDDIPEGMLIDYILASANFPVFKRENIGG
HHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEEECCCCC
AKFIDGGVYANIPVEMAIKKGFKKIVVVDIGTYGIVDILNLIKGFTKSDEEIIYIKPREY
CEEECCCEEECCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEEECHHH
YGGILTFDPEVSKKYMAEGYLDTLKAYGILHGNVYYIYPGEDLIGKFFMSLDDQQRAQAM
HCCEEEECCHHHHHHHHHHHHHHHHHHEEEECCEEEEECCHHHHHHHHHCCCHHHHHHEE
AILEIKPLEDAPVAYHYYRQVLPYLESAFKTFNAPPRKTCEAVLENIASYLEINKLRPYS
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
IEELFKTIVNSDEPQTTRSTLLKLTVGKKYDMLIEFLKFIWNNSKHDVEISEDYKRIRSS
HHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
FESLITIP
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA