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The map label for this gene is ygeY [H]

Identifier: 239618429

GI number: 239618429

Start: 2196681

End: 2197880

Strand: Direct

Name: ygeY [H]

Synonym: Kole_2070

Alternate gene names: 239618429

Gene position: 2196681-2197880 (Clockwise)

Preceding gene: 239618428

Following gene: 239618430

Centisome position: 95.42

GC content: 42.33

Gene sequence:

>1200_bases
ATGATAGGGAAAAAACTTCTGGAGACAGCGGAAAAATATCGTGAAGATCTAACGAATTTCATGCAGGATTTAATAAGGAC
CAAAAGCTATTCTGCCCAAGAAAAAGACGTTATACTCAGAATCAAAGAAGAAATGGAAAAGGTAGGATTTGATGAGGTTA
TTATCGATGGCCTCGGAAATGTTCTGGGAAGAGTTGGAAACGGAAGTAAGATCATCGCCATGGACGCTCACATCGACACA
GTAGAGGTTGGAAACCCTGATTTATGGGAAGTAGATCCCTTTGAAGCGGTTTTAAAGGACGGGATAATCTATGGAAGAGG
CGCAAGCGACCAGAAGGCCGGTATGGCTTCGATGGTATATGGCGTTAAGGTAATGAAAGAACTTGGGCTTTTGGGTGACT
TCACGCTGTATGTTACTGGAACAGTAATGGAAGAGGATTGCGACGGTTTGTGCTGGCAGTACATCGTCAAAGAAGACCGA
ATTAAACCGGATTACGTGGTTATAACAGAGCCAACCAATTTGAATATTTACAGAGGTCATAGGGGAAGGATCGAGCTTCA
GATAAAAACAGTCGGTCTTTCCTGCCATGCTAGCGCTCCGGAACGGGGTATAAATGCCGTATATAAAATGAGCAGAATAA
TTCAGGAAATAGAAAAGCTAAACGACAGACTAAAAGATGACCCATTCCTTGGAAAAGGAACGATAGCGGTCACCCAAATT
TTCTTCAAATCTCCATCTCATAATGCTGTCCCCGATGAATGTGTAATTCAGCTTGATAGAAGACTTACCGCAGGAGAAAC
CAGAGAGACTGTTATCGCTGAACTCGAGGATGCGATCAAAAGAGCCGGAGAAGAAGCCGAAATTATAGAACTCGAATACA
GAAGGCCTTCTTATACAGGTGTCGAGTATCCTACAAAGAAATACTTCCCAACATGGGTAATGGATGAAGATCATGAGATT
GTGAAGAAAACAGTAGCGGCTTATAAGGAAGTATTTGGAGAAGAGCCGTTTGTTGATAAGTGGACTTTTTCAACAAACGG
CGTTGCTACCGCAGGAATGTTTGGAATACCTACGATAGGATTTGGGCCTGCGAATGAAATCTATGCGCACAGCCCAAAGG
ATCAGGTACCTGTTGATCATCTTGTTAAGGCAGCTGCAATGTATGCTTATTTACCTTTGAAACTTTCAAAAGAACTTTAA

Upstream 100 bases:

>100_bases
TCATCTTTGGCCTCTATTAAGATTTTACGGTGTAGATGTTTGCAAGTATAATAAAAAGAAATAGTGAATATCTAAAATTT
TCGTAGAAAGGAATGATTGA

Downstream 100 bases:

>100_bases
GGAGGGTTAGTTATGGGAAGCATGCTCAGAGGAAAGCATTTCATCACCACACAGGAATTTAAAAAAGAAGAAATTGATCT
CATGCTGGATCTGGCAGCAG

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MIGKKLLETAEKYREDLTNFMQDLIRTKSYSAQEKDVILRIKEEMEKVGFDEVIIDGLGNVLGRVGNGSKIIAMDAHIDT
VEVGNPDLWEVDPFEAVLKDGIIYGRGASDQKAGMASMVYGVKVMKELGLLGDFTLYVTGTVMEEDCDGLCWQYIVKEDR
IKPDYVVITEPTNLNIYRGHRGRIELQIKTVGLSCHASAPERGINAVYKMSRIIQEIEKLNDRLKDDPFLGKGTIAVTQI
FFKSPSHNAVPDECVIQLDRRLTAGETRETVIAELEDAIKRAGEEAEIIELEYRRPSYTGVEYPTKKYFPTWVMDEDHEI
VKKTVAAYKEVFGEEPFVDKWTFSTNGVATAGMFGIPTIGFGPANEIYAHSPKDQVPVDHLVKAAAMYAYLPLKLSKEL

Sequences:

>Translated_399_residues
MIGKKLLETAEKYREDLTNFMQDLIRTKSYSAQEKDVILRIKEEMEKVGFDEVIIDGLGNVLGRVGNGSKIIAMDAHIDT
VEVGNPDLWEVDPFEAVLKDGIIYGRGASDQKAGMASMVYGVKVMKELGLLGDFTLYVTGTVMEEDCDGLCWQYIVKEDR
IKPDYVVITEPTNLNIYRGHRGRIELQIKTVGLSCHASAPERGINAVYKMSRIIQEIEKLNDRLKDDPFLGKGTIAVTQI
FFKSPSHNAVPDECVIQLDRRLTAGETRETVIAELEDAIKRAGEEAEIIELEYRRPSYTGVEYPTKKYFPTWVMDEDHEI
VKKTVAAYKEVFGEEPFVDKWTFSTNGVATAGMFGIPTIGFGPANEIYAHSPKDQVPVDHLVKAAAMYAYLPLKLSKEL
>Mature_399_residues
MIGKKLLETAEKYREDLTNFMQDLIRTKSYSAQEKDVILRIKEEMEKVGFDEVIIDGLGNVLGRVGNGSKIIAMDAHIDT
VEVGNPDLWEVDPFEAVLKDGIIYGRGASDQKAGMASMVYGVKVMKELGLLGDFTLYVTGTVMEEDCDGLCWQYIVKEDR
IKPDYVVITEPTNLNIYRGHRGRIELQIKTVGLSCHASAPERGINAVYKMSRIIQEIEKLNDRLKDDPFLGKGTIAVTQI
FFKSPSHNAVPDECVIQLDRRLTAGETRETVIAELEDAIKRAGEEAEIIELEYRRPSYTGVEYPTKKYFPTWVMDEDHEI
VKKTVAAYKEVFGEEPFVDKWTFSTNGVATAGMFGIPTIGFGPANEIYAHSPKDQVPVDHLVKAAAMYAYLPLKLSKEL

Specific function: Unknown

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

Organism=Escherichia coli, GI1789236, Length=393, Percent_Identity=54.70737913486, Blast_Score=447, Evalue=1e-127,
Organism=Escherichia coli, GI1790395, Length=371, Percent_Identity=26.4150943396226, Blast_Score=101, Evalue=7e-23,
Organism=Escherichia coli, GI1788816, Length=266, Percent_Identity=23.6842105263158, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001261
- InterPro:   IPR017706
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 44790; Mature: 44790

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS00758 ARGE_DAPE_CPG2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGKKLLETAEKYREDLTNFMQDLIRTKSYSAQEKDVILRIKEEMEKVGFDEVIIDGLGN
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH
VLGRVGNGSKIIAMDAHIDTVEVGNPDLWEVDPFEAVLKDGIIYGRGASDQKAGMASMVY
HHHCCCCCCEEEEEECCCCEEECCCCCCCCCCHHHHHHHCCEEECCCCCCHHHHHHHHHH
GVKVMKELGLLGDFTLYVTGTVMEEDCDGLCWQYIVKEDRIKPDYVVITEPTNLNIYRGH
HHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEEECC
RGRIELQIKTVGLSCHASAPERGINAVYKMSRIIQEIEKLNDRLKDDPFLGKGTIAVTQI
CCEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEH
FFKSPSHNAVPDECVIQLDRRLTAGETRETVIAELEDAIKRAGEEAEIIELEYRRPSYTG
HHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC
VEYPTKKYFPTWVMDEDHEIVKKTVAAYKEVFGEEPFVDKWTFSTNGVATAGMFGIPTIG
CCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEECCCCCCCCCC
FGPANEIYAHSPKDQVPVDHLVKAAAMYAYLPLKLSKEL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEECCCC
>Mature Secondary Structure
MIGKKLLETAEKYREDLTNFMQDLIRTKSYSAQEKDVILRIKEEMEKVGFDEVIIDGLGN
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH
VLGRVGNGSKIIAMDAHIDTVEVGNPDLWEVDPFEAVLKDGIIYGRGASDQKAGMASMVY
HHHCCCCCCEEEEEECCCCEEECCCCCCCCCCHHHHHHHCCEEECCCCCCHHHHHHHHHH
GVKVMKELGLLGDFTLYVTGTVMEEDCDGLCWQYIVKEDRIKPDYVVITEPTNLNIYRGH
HHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEEECC
RGRIELQIKTVGLSCHASAPERGINAVYKMSRIIQEIEKLNDRLKDDPFLGKGTIAVTQI
CCEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEH
FFKSPSHNAVPDECVIQLDRRLTAGETRETVIAELEDAIKRAGEEAEIIELEYRRPSYTG
HHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC
VEYPTKKYFPTWVMDEDHEIVKKTVAAYKEVFGEEPFVDKWTFSTNGVATAGMFGIPTIG
CCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEECCCCCCCCCC
FGPANEIYAHSPKDQVPVDHLVKAAAMYAYLPLKLSKEL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]