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The map label for this gene is dppC [H]

Identifier: 239618408

GI number: 239618408

Start: 2177703

End: 2178584

Strand: Direct

Name: dppC [H]

Synonym: Kole_2048

Alternate gene names: 239618408

Gene position: 2177703-2178584 (Clockwise)

Preceding gene: 239618407

Following gene: 239618409

Centisome position: 94.6

GC content: 44.44

Gene sequence:

>882_bases
GTGAATGAACTTCAGTGGAGCCCAACGTATAGACTTGGCAAATCTTTAAAAAGGTTTTTCGGTGATAAATCTGGCATAAT
GGCGTTCATCGGGATAGCGATTCTTGCGACATATGTTATTATGGCGATCTTTGCACCTTATGTTGCCCCTTATGATCCCG
TAAAGAGAACCGGCAGGGCGTTTATGCCGCCGTCGAAAGAGCACCTCTTCGGAACCACAAATCTCGGTTACGATGTACTG
AGCAGAATTATATATGGTGCAAGGATAGCATTGCAAATAGCGCTCCTGGCTGTTGCGGTGGCTGCTGCGATTGGCATTCC
TCTGGGTCTCATTTCCGGTTATATAGGCGGTGTATTCGACAGGATACTCACGATGTTTATGGACGCCATATATTCTTTTC
CGGGTTTAATTCTTGCTATTGCAATTGCCGCTGTGCTCGGGCCTGGAGTTATAAACGTTGCGTTATCGATAGCTGTAATA
TATGCACCAACGTATTTTAGAGTCATAAGAAATCAGGTTACTTCATTGAAAGACCAGCTTTTCGTTGAAGCTGCAAGAGC
AATCGGTGCGAAGAATTCAACGATCGTAATGAAGTACATATTGCCCAATGTTTTACCTTCAGTTGTGGTGGTTTTGTCCA
TGAATCTTGCAGATGCCATCATGACAGAAGCGGGGCTCAGTTTCTTAGGTCTTGGAATAGCTCCACCCACACCTGACTGG
GGTTATGATTTGTCAAATGGCCAGAGATTTCTGTTGTTAAATTACTGGTGGATGATTTTGTTCCCCGGTCTCGCTATTAT
TACACTTGTTCTTGGATTCAGTATGTTCAGTGAAGGAATGAACGAGTATCTGAATCCGAACGTTGGCGAGACCAGGAGGT
GA

Upstream 100 bases:

>100_bases
ATAGCGGTTTACGCTATTATCGTGATTGTTATAAGTATTGTTGTGGACATAGTTAATGCTCTCGTAGATCCAAGGGTAAG
ATATTAGGGGTGATTGTCCT

Downstream 100 bases:

>100_bases
GATAATGAATCTGTTGCAGCTTAGAAACCTGAGTGTCAGATATAAAACTCGCGAAGGGCGTGTCCTGGCAATTGAAGATC
TAAGCTTGAACCTGGGAGAC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MNELQWSPTYRLGKSLKRFFGDKSGIMAFIGIAILATYVIMAIFAPYVAPYDPVKRTGRAFMPPSKEHLFGTTNLGYDVL
SRIIYGARIALQIALLAVAVAAAIGIPLGLISGYIGGVFDRILTMFMDAIYSFPGLILAIAIAAVLGPGVINVALSIAVI
YAPTYFRVIRNQVTSLKDQLFVEAARAIGAKNSTIVMKYILPNVLPSVVVVLSMNLADAIMTEAGLSFLGLGIAPPTPDW
GYDLSNGQRFLLLNYWWMILFPGLAIITLVLGFSMFSEGMNEYLNPNVGETRR

Sequences:

>Translated_293_residues
MNELQWSPTYRLGKSLKRFFGDKSGIMAFIGIAILATYVIMAIFAPYVAPYDPVKRTGRAFMPPSKEHLFGTTNLGYDVL
SRIIYGARIALQIALLAVAVAAAIGIPLGLISGYIGGVFDRILTMFMDAIYSFPGLILAIAIAAVLGPGVINVALSIAVI
YAPTYFRVIRNQVTSLKDQLFVEAARAIGAKNSTIVMKYILPNVLPSVVVVLSMNLADAIMTEAGLSFLGLGIAPPTPDW
GYDLSNGQRFLLLNYWWMILFPGLAIITLVLGFSMFSEGMNEYLNPNVGETRR
>Mature_293_residues
MNELQWSPTYRLGKSLKRFFGDKSGIMAFIGIAILATYVIMAIFAPYVAPYDPVKRTGRAFMPPSKEHLFGTTNLGYDVL
SRIIYGARIALQIALLAVAVAAAIGIPLGLISGYIGGVFDRILTMFMDAIYSFPGLILAIAIAAVLGPGVINVALSIAVI
YAPTYFRVIRNQVTSLKDQLFVEAARAIGAKNSTIVMKYILPNVLPSVVVVLSMNLADAIMTEAGLSFLGLGIAPPTPDW
GYDLSNGQRFLLLNYWWMILFPGLAIITLVLGFSMFSEGMNEYLNPNVGETRR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=252, Percent_Identity=39.6825396825397, Blast_Score=198, Evalue=3e-52,
Organism=Escherichia coli, GI1787760, Length=258, Percent_Identity=37.5968992248062, Blast_Score=189, Evalue=1e-49,
Organism=Escherichia coli, GI1789964, Length=259, Percent_Identity=37.4517374517375, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1789889, Length=245, Percent_Identity=30.2040816326531, Blast_Score=131, Evalue=5e-32,
Organism=Escherichia coli, GI1787498, Length=281, Percent_Identity=31.6725978647687, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1787549, Length=282, Percent_Identity=29.0780141843972, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1788505, Length=226, Percent_Identity=28.7610619469027, Blast_Score=96, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31885; Mature: 31885

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure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CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]