| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
Click here to switch to the map view.
The map label for this gene is ybaB [C]
Identifier: 239618379
GI number: 239618379
Start: 2149776
End: 2150144
Strand: Direct
Name: ybaB [C]
Synonym: Kole_2019
Alternate gene names: 239618379
Gene position: 2149776-2150144 (Clockwise)
Preceding gene: 239618378
Following gene: 239618380
Centisome position: 93.38
GC content: 39.84
Gene sequence:
>369_bases ATGGCTAAGAAATTCAGAGGACTTGGCGGAAGAAATTTTGGTGGTTCCTCAAAAAAGGCTGGAAACATCTCTGAACTCTT AAAGCAAGCTCAAAAAGCTCAGGAAGAGATGCAAAAACTGGAGGAAAGTTTTAAAACAATGGAGGTTACAGCATCTGTCG GTGGTGGGGCTGTTCTTGTCACAGCAACATGCGATTATCGTATAAAATCTATAGAAATCGATGAAGACCTCAAAGATGAA GATTTTGAGGTGCTCCAGGATCTGATCATTGCGGGTGTTAACGAAGCTCTTGAAGAAGTGGGAAAGAAAAGAGAAGAAGA ATCAGGAAAAATAAGTTCTATGCTGAATTTACCGGATAAAATGCTCTAA
Upstream 100 bases:
>100_bases AAACTGAATCCAGATGAAAAGGCGTACGTGAAAAGAATTCTGACACTCTTTGAGGGTCTTGATGCAAAGGATGTAAAAAT TGAAATAGAGGAGGAGGGTA
Downstream 100 bases:
>100_bases CAAGCTTATTTTAGGAGGTGCTAAAGATGAAAGTCGCGATTAACGGTTTTGGAAGAATTGGGAGATTGGTGTTCAGAGAG ATGGTAAAGCGCGGAAACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MAKKFRGLGGRNFGGSSKKAGNISELLKQAQKAQEEMQKLEESFKTMEVTASVGGGAVLVTATCDYRIKSIEIDEDLKDE DFEVLQDLIIAGVNEALEEVGKKREEESGKISSMLNLPDKML
Sequences:
>Translated_122_residues MAKKFRGLGGRNFGGSSKKAGNISELLKQAQKAQEEMQKLEESFKTMEVTASVGGGAVLVTATCDYRIKSIEIDEDLKDE DFEVLQDLIIAGVNEALEEVGKKREEESGKISSMLNLPDKML >Mature_121_residues AKKFRGLGGRNFGGSSKKAGNISELLKQAQKAQEEMQKLEESFKTMEVTASVGGGAVLVTATCDYRIKSIEIDEDLKDED FEVLQDLIIAGVNEALEEVGKKREEESGKISSMLNLPDKML
Specific function: Unknown
COG id: COG0718
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0133 family [H]
Homologues:
Organism=Escherichia coli, GI1786677, Length=98, Percent_Identity=37.7551020408163, Blast_Score=73, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004401 [H]
Pfam domain/function: PF02575 DUF149 [H]
EC number: NA
Molecular weight: Translated: 13370; Mature: 13239
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKFRGLGGRNFGGSSKKAGNISELLKQAQKAQEEMQKLEESFKTMEVTASVGGGAVLV CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE TATCDYRIKSIEIDEDLKDEDFEVLQDLIIAGVNEALEEVGKKREEESGKISSMLNLPDK EEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCC ML CC >Mature Secondary Structure AKKFRGLGGRNFGGSSKKAGNISELLKQAQKAQEEMQKLEESFKTMEVTASVGGGAVLV CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE TATCDYRIKSIEIDEDLKDEDFEVLQDLIIAGVNEALEEVGKKREEESGKISSMLNLPDK EEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCC ML CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA