Click here to switch to the map view.

The map label for this gene is 239618365

Identifier: 239618365

GI number: 239618365

Start: 2126697

End: 2127932

Strand: Reverse

Name: 239618365

Synonym: Kole_2003

Alternate gene names: NA

Gene position: 2127932-2126697 (Counterclockwise)

Preceding gene: 239618366

Following gene: 239618364

Centisome position: 92.43

GC content: 43.2

Gene sequence:

>1236_bases
ATGAGAAAGTTCTTTGTTCTTTTGATGATTCTTTCAATGGCCTTTGTCGCATTCTCAGCAAATCAACTAGAAATATTTAG
CTGGTGGACAGGCGGTGGAGAAGAAGAAGGCTTGCTGGCGCTCTTTGATGTCTTTCACAAATACTATCCCGATGTAGAAA
TCATCAATGCTACAGTCGCCGGGGGTGCTGGTACAAACGCTAAAGCCGTATTGAAAACAAGAATGCTCGGTGGGAACCCA
CCTGATTCTTTCCAGGTCCACGGTGGTATGGAACTTATCGATACCTATGTGGTTACAGGAATGATGGAACCGATAACTGA
TTTACTTGAAGAATGGGGAATAATCGATAAGTTCCCGGAAGATATTCTCAAAATCTGTAGTTACAAAGGTGAAGTTTACT
CTATCCCTGTCAATGTTCACAGAGGAAACGTTGTTTTCTACAACAAAGCGATTCTCGAAGAGGTAGGTATTGAAAAAGTT
CCTTCTACGTGGCCGGAATTTATAGAAGTCCTGAAAAAAATTAAAAAAGCAGGTTATATCCCTCTGGCATTAGGTGACAA
GAACAAATGGACTGCAACACATTTATTCGAAGACATACTTCTTTCAACTCTTGGCCCGTACAACTACAACGGTCTCTGGA
ATGGAAGAACCTCCTTTGAGCATCAAGGAGTAAAGGAAGCTCTGGAAATATTCAAGGAACTTATGAATTACGTGAACCCC
AACCATGCTTCTCTCACATGGCAGGATGCCACATTGCTCGTGTTTGAGGGCAAAGCTGCTTTTAATGTGATGGGAGACTG
GGCTGAAGGATATCTGAAGACATTGGGTTGGACACCGGGTAAAGAATTCGGCTGGATGGTAGTTCCCGGAACGAAGGGTT
CTTTCATGGTCGTTACAGACACCTTTGGGCTCCCGAAAAATGCTCCTCACAGAGAGAATGCCATCAAATGGCTAAAGATT
ATATCTTCCGTCGAAGGTCAGGATACTTTCAACCCAATCAAAGGATCGATTCCTGCTAGAATCGATGCTGACAGAAGCCT
TTACGATGACTATTTGATCTGGTCCATGGACGATTTCGCAACAAATGCCCTCTGTCCGTCGATCATTCATGGTTCCGCCG
CTCCTGAAGCCTTCGTCACTGCCCTCAACGATACTATCAACATGTTTATAACCAGAAAAGACGTTAAAAAAGCGCTTAAA
GAGATTATTTACGCCGCTGAAGACTATCTAGAATAA

Upstream 100 bases:

>100_bases
GCAAAATGGTTAGAGGCCAAAAGTATCGAACATGTACATCATTAGGGACAATCTTTTTTTAATACCCCATAAGGGGAAAT
CTTAAAGGGGAGGTAGTGTT

Downstream 100 bases:

>100_bases
AAATAAGGAGGCCCCTCTGGGGCCTCTTTGTTCACTTCACATTAGGGGGTGAAGCCTATCAAAGGATCAACTCGACGGAA
GTTAACAGGATTTCTGATTC

Product: extracellular solute-binding protein family 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MRKFFVLLMILSMAFVAFSANQLEIFSWWTGGGEEEGLLALFDVFHKYYPDVEIINATVAGGAGTNAKAVLKTRMLGGNP
PDSFQVHGGMELIDTYVVTGMMEPITDLLEEWGIIDKFPEDILKICSYKGEVYSIPVNVHRGNVVFYNKAILEEVGIEKV
PSTWPEFIEVLKKIKKAGYIPLALGDKNKWTATHLFEDILLSTLGPYNYNGLWNGRTSFEHQGVKEALEIFKELMNYVNP
NHASLTWQDATLLVFEGKAAFNVMGDWAEGYLKTLGWTPGKEFGWMVVPGTKGSFMVVTDTFGLPKNAPHRENAIKWLKI
ISSVEGQDTFNPIKGSIPARIDADRSLYDDYLIWSMDDFATNALCPSIIHGSAAPEAFVTALNDTINMFITRKDVKKALK
EIIYAAEDYLE

Sequences:

>Translated_411_residues
MRKFFVLLMILSMAFVAFSANQLEIFSWWTGGGEEEGLLALFDVFHKYYPDVEIINATVAGGAGTNAKAVLKTRMLGGNP
PDSFQVHGGMELIDTYVVTGMMEPITDLLEEWGIIDKFPEDILKICSYKGEVYSIPVNVHRGNVVFYNKAILEEVGIEKV
PSTWPEFIEVLKKIKKAGYIPLALGDKNKWTATHLFEDILLSTLGPYNYNGLWNGRTSFEHQGVKEALEIFKELMNYVNP
NHASLTWQDATLLVFEGKAAFNVMGDWAEGYLKTLGWTPGKEFGWMVVPGTKGSFMVVTDTFGLPKNAPHRENAIKWLKI
ISSVEGQDTFNPIKGSIPARIDADRSLYDDYLIWSMDDFATNALCPSIIHGSAAPEAFVTALNDTINMFITRKDVKKALK
EIIYAAEDYLE
>Mature_411_residues
MRKFFVLLMILSMAFVAFSANQLEIFSWWTGGGEEEGLLALFDVFHKYYPDVEIINATVAGGAGTNAKAVLKTRMLGGNP
PDSFQVHGGMELIDTYVVTGMMEPITDLLEEWGIIDKFPEDILKICSYKGEVYSIPVNVHRGNVVFYNKAILEEVGIEKV
PSTWPEFIEVLKKIKKAGYIPLALGDKNKWTATHLFEDILLSTLGPYNYNGLWNGRTSFEHQGVKEALEIFKELMNYVNP
NHASLTWQDATLLVFEGKAAFNVMGDWAEGYLKTLGWTPGKEFGWMVVPGTKGSFMVVTDTFGLPKNAPHRENAIKWLKI
ISSVEGQDTFNPIKGSIPARIDADRSLYDDYLIWSMDDFATNALCPSIIHGSAAPEAFVTALNDTINMFITRKDVKKALK
EIIYAAEDYLE

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46027; Mature: 46027

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKFFVLLMILSMAFVAFSANQLEIFSWWTGGGEEEGLLALFDVFHKYYPDVEIINATVA
CHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEEEC
GGAGTNAKAVLKTRMLGGNPPDSFQVHGGMELIDTYVVTGMMEPITDLLEEWGIIDKFPE
CCCCCCHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHH
DILKICSYKGEVYSIPVNVHRGNVVFYNKAILEEVGIEKVPSTWPEFIEVLKKIKKAGYI
HHHHHHCCCCCEEEEEEEEECCCEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCE
PLALGDKNKWTATHLFEDILLSTLGPYNYNGLWNGRTSFEHQGVKEALEIFKELMNYVNP
EEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHCCHHHHHHHHHHHHHHCCC
NHASLTWQDATLLVFEGKAAFNVMGDWAEGYLKTLGWTPGKEFGWMVVPGTKGSFMVVTD
CCCEEEECCEEEEEEECCEEEEECCHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEEE
TFGLPKNAPHRENAIKWLKIISSVEGQDTFNPIKGSIPARIDADRSLYDDYLIWSMDDFA
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEECHHHH
TNALCPSIIHGSAAPEAFVTALNDTINMFITRKDVKKALKEIIYAAEDYLE
HHHCCHHHHCCCCCHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKFFVLLMILSMAFVAFSANQLEIFSWWTGGGEEEGLLALFDVFHKYYPDVEIINATVA
CHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEEEC
GGAGTNAKAVLKTRMLGGNPPDSFQVHGGMELIDTYVVTGMMEPITDLLEEWGIIDKFPE
CCCCCCHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHH
DILKICSYKGEVYSIPVNVHRGNVVFYNKAILEEVGIEKVPSTWPEFIEVLKKIKKAGYI
HHHHHHCCCCCEEEEEEEEECCCEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCE
PLALGDKNKWTATHLFEDILLSTLGPYNYNGLWNGRTSFEHQGVKEALEIFKELMNYVNP
EEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHCCHHHHHHHHHHHHHHCCC
NHASLTWQDATLLVFEGKAAFNVMGDWAEGYLKTLGWTPGKEFGWMVVPGTKGSFMVVTD
CCCEEEECCEEEEEEECCEEEEECCHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEEE
TFGLPKNAPHRENAIKWLKIISSVEGQDTFNPIKGSIPARIDADRSLYDDYLIWSMDDFA
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEECHHHH
TNALCPSIIHGSAAPEAFVTALNDTINMFITRKDVKKALKEIIYAAEDYLE
HHHCCHHHHCCCCCHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]