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The map label for this gene is ugpA [C]

Identifier: 239618364

GI number: 239618364

Start: 2125710

End: 2126648

Strand: Reverse

Name: ugpA [C]

Synonym: Kole_2002

Alternate gene names: 239618364

Gene position: 2126648-2125710 (Counterclockwise)

Preceding gene: 239618365

Following gene: 239618363

Centisome position: 92.38

GC content: 41.11

Gene sequence:

>939_bases
GTGAAGCCTATCAAAGGATCAACTCGACGGAAGTTAACAGGATTTCTGATTCTGCTGCCAACGATTGTGTCACTGACCAT
TTTTGTATACATATTTATAGGCTGGACTGTAAGAGTTTCTTTCTCGAATTGGAACAGCTTTTCCAGACTCCTAAGGGGTG
AATATAGATTCGTCGGCTTAAGAAATTATCTGAGGCTTTTTGAAGACCCACGTTTTCAGACAGACTTATGGAATACGCTC
TACTTTACTCTCTTTTTCATAATCGGTTGTCTATCGTTGGGAATAATCCTCGCTGTTCTTGTGGACAAAGGGTTAAAAGG
TTCAAGGGTATTTCAAAACATCTTCTTATTTCCAATGGCCATTTCCTTTGTTGTTACCGGTACTGTTTGGAGCTGGATTT
TTGCGCCGGGAATTCCGCCTAAATACCCGCAGGGGATAAACCTGCTTTTCAAAATGCTCGGACTTGAAGCTTTGCAGTGG
AAATGGTACACCAGCACCACCTCATTTCTACATTTTAACGTTGCCCTAATTCCAGTAATAATAGCCGCCATCTGGCAATT
ATCAGGTTATACAATGGCTATGTATCTGGCAGGATTGAGAGGAATCCCACAATCACTGATTGAAGCAGCCAAAGTTGACG
GTGCTTCTGACAAGCAAATTTTCTGGAAAATTAAATTTCCGATTTTGCGTCCAATAACCCTAAGCGCAATGATAATCCTC
GGCCATATTTCCTTGAAGATCTTTGATCTTGTTTATGCTATGACCGGAAGTGGCCCAAATAATGTTACTGATGTACCTGC
AATTTATATGTTTGAAACTACATTCCGGGCAAATAGATATGCTACCGGCTCTGCCATCGCCATTATAATGCTTGTAATGG
TAGCAGTAGTGATAGTACCGTACCTTATTTCATCCATGAAAAGGGAAGTGAGCAGATGA

Upstream 100 bases:

>100_bases
TAAAAAAGCGCTTAAAGAGATTATTTACGCCGCTGAAGACTATCTAGAATAAAAATAAGGAGGCCCCTCTGGGGCCTCTT
TGTTCACTTCACATTAGGGG

Downstream 100 bases:

>100_bases
AAAAAATAAATGCGACCTTAACATATATTCTTTTACTCATCTTCGCAGCTTTTTTCTTAATGCCAATATATGTTCTATTC
TCAACCAGTTTTAAGTCACT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MKPIKGSTRRKLTGFLILLPTIVSLTIFVYIFIGWTVRVSFSNWNSFSRLLRGEYRFVGLRNYLRLFEDPRFQTDLWNTL
YFTLFFIIGCLSLGIILAVLVDKGLKGSRVFQNIFLFPMAISFVVTGTVWSWIFAPGIPPKYPQGINLLFKMLGLEALQW
KWYTSTTSFLHFNVALIPVIIAAIWQLSGYTMAMYLAGLRGIPQSLIEAAKVDGASDKQIFWKIKFPILRPITLSAMIIL
GHISLKIFDLVYAMTGSGPNNVTDVPAIYMFETTFRANRYATGSAIAIIMLVMVAVVIVPYLISSMKREVSR

Sequences:

>Translated_312_residues
MKPIKGSTRRKLTGFLILLPTIVSLTIFVYIFIGWTVRVSFSNWNSFSRLLRGEYRFVGLRNYLRLFEDPRFQTDLWNTL
YFTLFFIIGCLSLGIILAVLVDKGLKGSRVFQNIFLFPMAISFVVTGTVWSWIFAPGIPPKYPQGINLLFKMLGLEALQW
KWYTSTTSFLHFNVALIPVIIAAIWQLSGYTMAMYLAGLRGIPQSLIEAAKVDGASDKQIFWKIKFPILRPITLSAMIIL
GHISLKIFDLVYAMTGSGPNNVTDVPAIYMFETTFRANRYATGSAIAIIMLVMVAVVIVPYLISSMKREVSR
>Mature_312_residues
MKPIKGSTRRKLTGFLILLPTIVSLTIFVYIFIGWTVRVSFSNWNSFSRLLRGEYRFVGLRNYLRLFEDPRFQTDLWNTL
YFTLFFIIGCLSLGIILAVLVDKGLKGSRVFQNIFLFPMAISFVVTGTVWSWIFAPGIPPKYPQGINLLFKMLGLEALQW
KWYTSTTSFLHFNVALIPVIIAAIWQLSGYTMAMYLAGLRGIPQSLIEAAKVDGASDKQIFWKIKFPILRPITLSAMIIL
GHISLKIFDLVYAMTGSGPNNVTDVPAIYMFETTFRANRYATGSAIAIIMLVMVAVVIVPYLISSMKREVSR

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=245, Percent_Identity=28.1632653061224, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1787570, Length=246, Percent_Identity=25.2032520325203, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1790465, Length=285, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35359; Mature: 35359

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPIKGSTRRKLTGFLILLPTIVSLTIFVYIFIGWTVRVSFSNWNSFSRLLRGEYRFVGL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHCCCHHEEHH
RNYLRLFEDPRFQTDLWNTLYFTLFFIIGCLSLGIILAVLVDKGLKGSRVFQNIFLFPMA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ISFVVTGTVWSWIFAPGIPPKYPQGINLLFKMLGLEALQWKWYTSTTSFLHFNVALIPVI
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHEEEEEECCCHHHHHHHHHHHHH
IAAIWQLSGYTMAMYLAGLRGIPQSLIEAAKVDGASDKQIFWKIKFPILRPITLSAMIIL
HHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHH
GHISLKIFDLVYAMTGSGPNNVTDVPAIYMFETTFRANRYATGSAIAIIMLVMVAVVIVP
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHH
YLISSMKREVSR
HHHHHHHHHHCC
>Mature Secondary Structure
MKPIKGSTRRKLTGFLILLPTIVSLTIFVYIFIGWTVRVSFSNWNSFSRLLRGEYRFVGL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHCCCHHEEHH
RNYLRLFEDPRFQTDLWNTLYFTLFFIIGCLSLGIILAVLVDKGLKGSRVFQNIFLFPMA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ISFVVTGTVWSWIFAPGIPPKYPQGINLLFKMLGLEALQWKWYTSTTSFLHFNVALIPVI
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHEEEEEECCCHHHHHHHHHHHHH
IAAIWQLSGYTMAMYLAGLRGIPQSLIEAAKVDGASDKQIFWKIKFPILRPITLSAMIIL
HHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHH
GHISLKIFDLVYAMTGSGPNNVTDVPAIYMFETTFRANRYATGSAIAIIMLVMVAVVIVP
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHH
YLISSMKREVSR
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]