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The map label for this gene is etfB [H]

Identifier: 239618360

GI number: 239618360

Start: 2121594

End: 2122388

Strand: Direct

Name: etfB [H]

Synonym: Kole_1998

Alternate gene names: 239618360

Gene position: 2121594-2122388 (Clockwise)

Preceding gene: 239618359

Following gene: 239618361

Centisome position: 92.16

GC content: 46.04

Gene sequence:

>795_bases
GTGAATATAGCCGTACTCATAAAACAGGTACCCGATACAGATGAAGTGAAACTCGATCCTGAGACGGGAACCATGATAAG
AGAAGGGTTGGAAAATATCATAAATCCCCTGGATTTGCACGCATTAGAAGCAGCTCTCAGAATAAAGGAAACTAACGGTG
CTAAAGTAACGGTGGTCACAATGGGACCTCCGGTGGCTGAGGAAGCTTTAAGGGAAGCCATAGCGATGGGAGCAGATACC
GCTGTGCTTGTTAGCGATAGGCGTTTTGCCGGAGCGGATACATATGCTACTGCCAGAACCCTGGTGGCCACCCTATGGAA
ACTCGGTAATTTCGATTTAATACTCGCGGGAGAAAAATCTATCGATGGAGAAACCGGACAGGTTGGTCCTGAAGTGGGAG
CTCTCATGGGGATACCTGTATTATCCTATGTGTCTGATATATGTGACGTTTCTGAGTCTGGTATTGTGGCAGAACGAGAG
GTGGAAGAAGGAAAAGAAAAGTGGAAGGTCAGTTTTCCCTGTTTGCTTACAGTTACAAAGGATGTAAACGAACCGAGATT
GCCGACACTTTCAGGGAAGAAAAAGGCCAAAAAAGCGAAGATAGAGGTGCTCAATTGCGACATGACAGGGATAGATCCCG
CTATGGTAGGGTTGAAAGGTTCGCCGACCAGAGTGGTGAAGATCAGCACGCCGAAGATTTCAAGAACGGTTGAGATGTAC
GAGGGGAAGAATTTGAATAAAGGTATAGACAAAGTGATAGAACTGCTCAAGCCGTTTTTGGAGGTAGAAAAATGA

Upstream 100 bases:

>100_bases
TCGTGATATGTGTAAACGTATCGTTTGAAAATGTACTACAGCGATTTCATAAGAATATCTTGATAAAGCAATCTGATTAA
ATTCCAAGGAGGAGAAACAG

Downstream 100 bases:

>100_bases
GTAAGGATATATGGGTTATAGCGGAGAGAAGAAACGACGAAATTCATTCCAGTACCTACGAATTACTGGGCAAAGCGAGG
GAAATTGCTAAAAAAGCTGG

Product: Electron transfer flavoprotein alpha/beta-subunit

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MNIAVLIKQVPDTDEVKLDPETGTMIREGLENIINPLDLHALEAALRIKETNGAKVTVVTMGPPVAEEALREAIAMGADT
AVLVSDRRFAGADTYATARTLVATLWKLGNFDLILAGEKSIDGETGQVGPEVGALMGIPVLSYVSDICDVSESGIVAERE
VEEGKEKWKVSFPCLLTVTKDVNEPRLPTLSGKKKAKKAKIEVLNCDMTGIDPAMVGLKGSPTRVVKISTPKISRTVEMY
EGKNLNKGIDKVIELLKPFLEVEK

Sequences:

>Translated_264_residues
MNIAVLIKQVPDTDEVKLDPETGTMIREGLENIINPLDLHALEAALRIKETNGAKVTVVTMGPPVAEEALREAIAMGADT
AVLVSDRRFAGADTYATARTLVATLWKLGNFDLILAGEKSIDGETGQVGPEVGALMGIPVLSYVSDICDVSESGIVAERE
VEEGKEKWKVSFPCLLTVTKDVNEPRLPTLSGKKKAKKAKIEVLNCDMTGIDPAMVGLKGSPTRVVKISTPKISRTVEMY
EGKNLNKGIDKVIELLKPFLEVEK
>Mature_264_residues
MNIAVLIKQVPDTDEVKLDPETGTMIREGLENIINPLDLHALEAALRIKETNGAKVTVVTMGPPVAEEALREAIAMGADT
AVLVSDRRFAGADTYATARTLVATLWKLGNFDLILAGEKSIDGETGQVGPEVGALMGIPVLSYVSDICDVSESGIVAERE
VEEGKEKWKVSFPCLLTVTKDVNEPRLPTLSGKKKAKKAKIEVLNCDMTGIDPAMVGLKGSPTRVVKISTPKISRTVEMY
EGKNLNKGIDKVIELLKPFLEVEK

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=218, Percent_Identity=30.7339449541284, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI62420877, Length=203, Percent_Identity=31.0344827586207, Blast_Score=88, Evalue=9e-18,
Organism=Escherichia coli, GI2367123, Length=229, Percent_Identity=29.2576419213974, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI87081682, Length=215, Percent_Identity=30.2325581395349, Blast_Score=86, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI25141345, Length=218, Percent_Identity=32.1100917431193, Blast_Score=99, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6321646, Length=180, Percent_Identity=31.1111111111111, Blast_Score=79, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24651147, Length=182, Percent_Identity=29.1208791208791, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24651145, Length=182, Percent_Identity=29.1208791208791, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 28496; Mature: 28496

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIAVLIKQVPDTDEVKLDPETGTMIREGLENIINPLDLHALEAALRIKETNGAKVTVVT
CCEEEEEEECCCCCCEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHEEEECCCCEEEEEE
MGPPVAEEALREAIAMGADTAVLVSDRRFAGADTYATARTLVATLWKLGNFDLILAGEKS
CCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCC
IDGETGQVGPEVGALMGIPVLSYVSDICDVSESGIVAEREVEEGKEKWKVSFPCLLTVTK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHEEEECCEEEEEEC
DVNEPRLPTLSGKKKAKKAKIEVLNCDMTGIDPAMVGLKGSPTRVVKISTPKISRTVEMY
CCCCCCCCCCCCCHHHHHEEEEEEECCCCCCCHHHCCCCCCCCEEEEEECCCCHHEEHHH
EGKNLNKGIDKVIELLKPFLEVEK
CCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNIAVLIKQVPDTDEVKLDPETGTMIREGLENIINPLDLHALEAALRIKETNGAKVTVVT
CCEEEEEEECCCCCCEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHEEEECCCCEEEEEE
MGPPVAEEALREAIAMGADTAVLVSDRRFAGADTYATARTLVATLWKLGNFDLILAGEKS
CCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCC
IDGETGQVGPEVGALMGIPVLSYVSDICDVSESGIVAEREVEEGKEKWKVSFPCLLTVTK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHEEEECCEEEEEEC
DVNEPRLPTLSGKKKAKKAKIEVLNCDMTGIDPAMVGLKGSPTRVVKISTPKISRTVEMY
CCCCCCCCCCCCCHHHHHEEEEEEECCCCCCCHHHCCCCCCCCEEEEEECCCCHHEEHHH
EGKNLNKGIDKVIELLKPFLEVEK
CCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA