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The map label for this gene is fixB [H]

Identifier: 239618361

GI number: 239618361

Start: 2122385

End: 2123398

Strand: Direct

Name: fixB [H]

Synonym: Kole_1999

Alternate gene names: 239618361

Gene position: 2122385-2123398 (Clockwise)

Preceding gene: 239618360

Following gene: 239618362

Centisome position: 92.19

GC content: 46.55

Gene sequence:

>1014_bases
ATGAGTAAGGATATATGGGTTATAGCGGAGAGAAGAAACGACGAAATTCATTCCAGTACCTACGAATTACTGGGCAAAGC
GAGGGAAATTGCTAAAAAAGCTGGAGACTTCATGGTTTGGGTGATCGTATTAAGTGAAAGAACGATGACTGAAACCGAGA
AAGGGTTGTTGTACCGTTACGGTGCCGATGGGATTATAGCGGCTGTCCATGAAGTTTTTCAGAGGTTTAATTTTTTGGCT
TACCTTGAAACCCTTGAGAAGCTTGCCAAAGAAGCTGAGCCAGAGATAATCCTGGCACCAGCCACCACTACCGGGAGAAC
GATTATGCCAGCGCTTGCAGGTGTTCTTGGTACAGGGTTGACGGCAGATTGTACCGGTCTGGATATCGAAGTTGAAACAG
GAAACCTCCTTCAAACTAGGCCGGCGATCGGTGGAAATATCATGGCTATGATTAAAACACCAGCCCATAGGCCACAGATG
GCTACCGTAAGACCAAAAACCTTTTCGGTACTGGAAGAAAAATATGATGGGCCGCGCGAATATCGCGAGATCCATCCCAT
TTTTTTCTCGAAGATCGATCGGATGGAACTGGTTGAATTTAAGGGCACCCCTTCAGAGATGAAAAGCATACAGGATTCAG
AAATAGTCATATCCGGCGGTAGAGGGCTGCGAAAGCCCGAGAACCTGGAGCTGTTGAAAAGAATAGCGAAGCTTGTCAAC
GGTTCAGTGGGTGCTTCTAGACCTATCGTTGATTCTAAATGGATAGGGCACGAATGTCAGGTTGGACTCAGCGGGCATAC
CGTGAAACCAAGGGTTTATCTCGCTGCCGGAATATCCGGGGCTGTACAGCACATAGCTGGAATGCAGACATCAGATGTGA
TAGTGGCGATAAACAAAGACAGAAACGCACCGATATTCGATTTCTCTGATATTGGTCTTGTGGGTGATGCGTCTGAAATC
CTTGAGACCATTCTAAAGCGGTTGGAAGCACTGAAAGGAGAGAAAGTAAGATGA

Upstream 100 bases:

>100_bases
CGAAGATTTCAAGAACGGTTGAGATGTACGAGGGGAAGAATTTGAATAAAGGTATAGACAAAGTGATAGAACTGCTCAAG
CCGTTTTTGGAGGTAGAAAA

Downstream 100 bases:

>100_bases
TTGAGATACAAGAAGAGTTGCTTAACAGTCTAAAAGAGATCTTTGGAGATAGAATGAAACTCGAAAGAGATTTCCTCGAG
AAATACTCCCGGGATGAAAC

Product: Electron transfer flavoprotein alpha subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MSKDIWVIAERRNDEIHSSTYELLGKAREIAKKAGDFMVWVIVLSERTMTETEKGLLYRYGADGIIAAVHEVFQRFNFLA
YLETLEKLAKEAEPEIILAPATTTGRTIMPALAGVLGTGLTADCTGLDIEVETGNLLQTRPAIGGNIMAMIKTPAHRPQM
ATVRPKTFSVLEEKYDGPREYREIHPIFFSKIDRMELVEFKGTPSEMKSIQDSEIVISGGRGLRKPENLELLKRIAKLVN
GSVGASRPIVDSKWIGHECQVGLSGHTVKPRVYLAAGISGAVQHIAGMQTSDVIVAINKDRNAPIFDFSDIGLVGDASEI
LETILKRLEALKGEKVR

Sequences:

>Translated_337_residues
MSKDIWVIAERRNDEIHSSTYELLGKAREIAKKAGDFMVWVIVLSERTMTETEKGLLYRYGADGIIAAVHEVFQRFNFLA
YLETLEKLAKEAEPEIILAPATTTGRTIMPALAGVLGTGLTADCTGLDIEVETGNLLQTRPAIGGNIMAMIKTPAHRPQM
ATVRPKTFSVLEEKYDGPREYREIHPIFFSKIDRMELVEFKGTPSEMKSIQDSEIVISGGRGLRKPENLELLKRIAKLVN
GSVGASRPIVDSKWIGHECQVGLSGHTVKPRVYLAAGISGAVQHIAGMQTSDVIVAINKDRNAPIFDFSDIGLVGDASEI
LETILKRLEALKGEKVR
>Mature_336_residues
SKDIWVIAERRNDEIHSSTYELLGKAREIAKKAGDFMVWVIVLSERTMTETEKGLLYRYGADGIIAAVHEVFQRFNFLAY
LETLEKLAKEAEPEIILAPATTTGRTIMPALAGVLGTGLTADCTGLDIEVETGNLLQTRPAIGGNIMAMIKTPAHRPQMA
TVRPKTFSVLEEKYDGPREYREIHPIFFSKIDRMELVEFKGTPSEMKSIQDSEIVISGGRGLRKPENLELLKRIAKLVNG
SVGASRPIVDSKWIGHECQVGLSGHTVKPRVYLAAGISGAVQHIAGMQTSDVIVAINKDRNAPIFDFSDIGLVGDASEIL
ETILKRLEALKGEKVR

Specific function: May play a role in a redox process [H]

COG id: COG2025

COG function: function code C; Electron transfer flavoprotein, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF alpha-subunit/fixB family [H]

Homologues:

Organism=Homo sapiens, GI4503607, Length=324, Percent_Identity=28.7037037037037, Blast_Score=121, Evalue=9e-28,
Organism=Homo sapiens, GI189181759, Length=234, Percent_Identity=32.9059829059829, Blast_Score=120, Evalue=2e-27,
Organism=Escherichia coli, GI1787990, Length=331, Percent_Identity=27.7945619335347, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1786226, Length=125, Percent_Identity=42.4, Blast_Score=111, Evalue=7e-26,
Organism=Escherichia coli, GI87082157, Length=96, Percent_Identity=35.4166666666667, Blast_Score=63, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17506929, Length=246, Percent_Identity=35.3658536585366, Blast_Score=129, Evalue=3e-30,
Organism=Saccharomyces cerevisiae, GI6325261, Length=247, Percent_Identity=31.1740890688259, Blast_Score=112, Evalue=8e-26,
Organism=Drosophila melanogaster, GI17136898, Length=320, Percent_Identity=31.5625, Blast_Score=128, Evalue=5e-30,
Organism=Drosophila melanogaster, GI24652801, Length=320, Percent_Identity=31.5625, Blast_Score=128, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001308
- InterPro:   IPR014730
- InterPro:   IPR014731
- InterPro:   IPR018206
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF; PF00766 ETF_alpha [H]

EC number: NA

Molecular weight: Translated: 37128; Mature: 36996

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKDIWVIAERRNDEIHSSTYELLGKAREIAKKAGDFMVWVIVLSERTMTETEKGLLYRY
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHCCEEEEE
GADGIIAAVHEVFQRFNFLAYLETLEKLAKEAEPEIILAPATTTGRTIMPALAGVLGTGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCC
TADCTGLDIEVETGNLLQTRPAIGGNIMAMIKTPAHRPQMATVRPKTFSVLEEKYDGPRE
CCCCCCEEEEECCCCEEEECCCCCCCEEEEEECCCCCCCEEEECCHHHHHHHHHCCCHHH
YREIHPIFFSKIDRMELVEFKGTPSEMKSIQDSEIVISGGRGLRKPENLELLKRIAKLVN
HHHHCHHHHHHCCHHEEEEECCCHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHC
GSVGASRPIVDSKWIGHECQVGLSGHTVKPRVYLAAGISGAVQHIAGMQTSDVIVAINKD
CCCCCCCCCCCCCCCCCEEEECCCCCEECCEEEEEECCHHHHHHHHCCCCCCEEEEEECC
RNAPIFDFSDIGLVGDASEILETILKRLEALKGEKVR
CCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SKDIWVIAERRNDEIHSSTYELLGKAREIAKKAGDFMVWVIVLSERTMTETEKGLLYRY
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHCCEEEEE
GADGIIAAVHEVFQRFNFLAYLETLEKLAKEAEPEIILAPATTTGRTIMPALAGVLGTGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCC
TADCTGLDIEVETGNLLQTRPAIGGNIMAMIKTPAHRPQMATVRPKTFSVLEEKYDGPRE
CCCCCCEEEEECCCCEEEECCCCCCCEEEEEECCCCCCCEEEECCHHHHHHHHHCCCHHH
YREIHPIFFSKIDRMELVEFKGTPSEMKSIQDSEIVISGGRGLRKPENLELLKRIAKLVN
HHHHCHHHHHHCCHHEEEEECCCHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHC
GSVGASRPIVDSKWIGHECQVGLSGHTVKPRVYLAAGISGAVQHIAGMQTSDVIVAINKD
CCCCCCCCCCCCCCCCCEEEECCCCCEECCEEEEEECCHHHHHHHHCCCCCCEEEEEECC
RNAPIFDFSDIGLVGDASEILETILKRLEALKGEKVR
CCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7875566 [H]