| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is malE [H]
Identifier: 239618354
GI number: 239618354
Start: 2114872
End: 2116131
Strand: Direct
Name: malE [H]
Synonym: Kole_1992
Alternate gene names: 239618354
Gene position: 2114872-2116131 (Clockwise)
Preceding gene: 239618353
Following gene: 239618355
Centisome position: 91.87
GC content: 41.27
Gene sequence:
>1260_bases ATGAGAAGAACTCTTGTGAAGGGGTTTTTGTTGGTACTTTTATTTATTACTAGCGTTTCAATAGCAGGCGGTATAACCGT ATATGTATGGGATTTTCCAGCCTGGAGTGTAGATGGTGATAATTATGCCTGGATAAAATCGATGATGAGAGAATATTCTG CGAATCATCCCGGGGTTTCGTTTAAACTTACGGAGATACCGTGGGCAGGTGGAGACAAGAAATTGGATCTTGCAGTAGCT TCGAGAAATTGGCCTGACATAACAAGAGGTCCGTTGAAGGCTCACTACGTTGTTCAGGGTGTACTGGTATCGACCGATGA GTACATAAATAAGGACGATTATTATGAACCCGCCCTAAAAGGTGCCACTTTTAATGGAAGAATCTATGGTTTTCCTTTTT ATATGACTACCAAAGTTGTGATGATAAATAGAGAGATATTTGAAGAGCGCGGTGTTCGCATCCCAACTTTTGAAGATCCC TGGACTTTCGAAGAATTCGCTCAGGCTCTGGAAAAATTGACTTATGATAAAGATGGTGATGGAAGAATAGATGTTTACGG TTTTGCTGCAAGCGCTATGCCTCCCGACAACTCACATCTTTGGCCCTTCCTTCTTGCCAACGGCGGTAAGATCATAGAAG AAGAAAAGGGAAATCTTCGCTGCGTTATCAACACTCCTGAAAACGCCGAAATACTTGGATACCTTGCAGGTATTTTCAAA AAATATGCGCCCCCCTATATGGCTGCATACGGTGATGCTGACGCATATAACTTATTCAAAAGCGGCAGAGCGGCAGTTTA TATGTCAGGTACATGGGCGATTCCACCGATTAGAAGAGCTGGTATAGATATAGATGTTGTTCCTTTCCCTGTTAAGAAGA AAGGTGATCGTTTTTGGAGCTTTGGAGATGTATCAAGTTATCAGATATTCATACAAAAAGATCCTAAAAAGCTCTCGATT CTCATAGATTTTGCTAAAACGATTACTTCAGTGGAACAACAGAAGAAACTTGTTGAGTATGGTCAATTCCCCACCCTTAA ATCTGTTGGGAACATCTATGAGGGTGATGATGCTATGACAAAGGCCGCTATTATATCCCAGTACAATTTTATTTTCCCGC CACATCCCGCTAAAGATAAAGCCATCGAAAAGATATCCCAACAGATACAATTAGCATTACTCGAGAGAATTTCACCGGAG GATGCGTTGAAGAATGCTGAAAAAGCGGCAAATAGAATACTGTTAAGAGGAGGCAAATAG
Upstream 100 bases:
>100_bases AGTTACTTTGCTCTCACCGTCCGGTGAGCCGGTTTTCAAGTACGATACATTTATTTTGTATCCAACAGAAATTGTCTGAT ATCTTTGGGAGGTGTTCGTT
Downstream 100 bases:
>100_bases GTGAAAAAACGGCAGCTTTACGGATACCTTTTCATATTACCTGCCATGTCATTATTTGTTGTTTTTCTGTTTATACCGGT TGTAATGGCCCTTGTAATGG
Product: extracellular solute-binding protein family 1
Products: NA
Alternate protein names: MMBP; Maltodextrin-binding protein [H]
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MRRTLVKGFLLVLLFITSVSIAGGITVYVWDFPAWSVDGDNYAWIKSMMREYSANHPGVSFKLTEIPWAGGDKKLDLAVA SRNWPDITRGPLKAHYVVQGVLVSTDEYINKDDYYEPALKGATFNGRIYGFPFYMTTKVVMINREIFEERGVRIPTFEDP WTFEEFAQALEKLTYDKDGDGRIDVYGFAASAMPPDNSHLWPFLLANGGKIIEEEKGNLRCVINTPENAEILGYLAGIFK KYAPPYMAAYGDADAYNLFKSGRAAVYMSGTWAIPPIRRAGIDIDVVPFPVKKKGDRFWSFGDVSSYQIFIQKDPKKLSI LIDFAKTITSVEQQKKLVEYGQFPTLKSVGNIYEGDDAMTKAAIISQYNFIFPPHPAKDKAIEKISQQIQLALLERISPE DALKNAEKAANRILLRGGK
Sequences:
>Translated_419_residues MRRTLVKGFLLVLLFITSVSIAGGITVYVWDFPAWSVDGDNYAWIKSMMREYSANHPGVSFKLTEIPWAGGDKKLDLAVA SRNWPDITRGPLKAHYVVQGVLVSTDEYINKDDYYEPALKGATFNGRIYGFPFYMTTKVVMINREIFEERGVRIPTFEDP WTFEEFAQALEKLTYDKDGDGRIDVYGFAASAMPPDNSHLWPFLLANGGKIIEEEKGNLRCVINTPENAEILGYLAGIFK KYAPPYMAAYGDADAYNLFKSGRAAVYMSGTWAIPPIRRAGIDIDVVPFPVKKKGDRFWSFGDVSSYQIFIQKDPKKLSI LIDFAKTITSVEQQKKLVEYGQFPTLKSVGNIYEGDDAMTKAAIISQYNFIFPPHPAKDKAIEKISQQIQLALLERISPE DALKNAEKAANRILLRGGK >Mature_419_residues MRRTLVKGFLLVLLFITSVSIAGGITVYVWDFPAWSVDGDNYAWIKSMMREYSANHPGVSFKLTEIPWAGGDKKLDLAVA SRNWPDITRGPLKAHYVVQGVLVSTDEYINKDDYYEPALKGATFNGRIYGFPFYMTTKVVMINREIFEERGVRIPTFEDP WTFEEFAQALEKLTYDKDGDGRIDVYGFAASAMPPDNSHLWPFLLANGGKIIEEEKGNLRCVINTPENAEILGYLAGIFK KYAPPYMAAYGDADAYNLFKSGRAAVYMSGTWAIPPIRRAGIDIDVVPFPVKKKGDRFWSFGDVSSYQIFIQKDPKKLSI LIDFAKTITSVEQQKKLVEYGQFPTLKSVGNIYEGDDAMTKAAIISQYNFIFPPHPAKDKAIEKISQQIQLALLERISPE DALKNAEKAANRILLRGGK
Specific function: Involved in an abc transport system for maltotriose. Binds maltotriose much more tightly than maltose [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006060 - InterPro: IPR006059 - InterPro: IPR006061 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 47129; Mature: 47129
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTLVKGFLLVLLFITSVSIAGGITVYVWDFPAWSVDGDNYAWIKSMMREYSANHPGVS CCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEECCCCCHHHHHHHHHHHCCCCCCCE FKLTEIPWAGGDKKLDLAVASRNWPDITRGPLKAHYVVQGVLVSTDEYINKDDYYEPALK EEEEECCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEEEECHHHCCCCCCCCHHHC GATFNGRIYGFPFYMTTKVVMINREIFEERGVRIPTFEDPWTFEEFAQALEKLTYDKDGD CCEECCEEEEEEHHHEEEEEEEEHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC GRIDVYGFAASAMPPDNSHLWPFLLANGGKIIEEEKGNLRCVINTPENAEILGYLAGIFK CEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHH KYAPPYMAAYGDADAYNLFKSGRAAVYMSGTWAIPPIRRAGIDIDVVPFPVKKKGDRFWS HHCCCCEEECCCCHHHHHHHCCCEEEEEECCCCCCCHHHCCCEEEEECCCCCCCCCCEEE FGDVSSYQIFIQKDPKKLSILIDFAKTITSVEQQKKLVEYGQFPTLKSVGNIYEGDDAMT CCCCCEEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHH KAAIISQYNFIFPPHPAKDKAIEKISQQIQLALLERISPEDALKNAEKAANRILLRGGK HHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCEEEEECCC >Mature Secondary Structure MRRTLVKGFLLVLLFITSVSIAGGITVYVWDFPAWSVDGDNYAWIKSMMREYSANHPGVS CCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEECCCCCHHHHHHHHHHHCCCCCCCE FKLTEIPWAGGDKKLDLAVASRNWPDITRGPLKAHYVVQGVLVSTDEYINKDDYYEPALK EEEEECCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEEEECHHHCCCCCCCCHHHC GATFNGRIYGFPFYMTTKVVMINREIFEERGVRIPTFEDPWTFEEFAQALEKLTYDKDGD CCEECCEEEEEEHHHEEEEEEEEHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC GRIDVYGFAASAMPPDNSHLWPFLLANGGKIIEEEKGNLRCVINTPENAEILGYLAGIFK CEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHH KYAPPYMAAYGDADAYNLFKSGRAAVYMSGTWAIPPIRRAGIDIDVVPFPVKKKGDRFWS HHCCCCEEECCCCHHHHHHHCCCEEEEEECCCCCCCHHHCCCEEEEECCCCCCCCCCEEE FGDVSSYQIFIQKDPKKLSILIDFAKTITSVEQQKKLVEYGQFPTLKSVGNIYEGDDAMT CCCCCEEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHH KAAIISQYNFIFPPHPAKDKAIEKISQQIQLALLERISPEDALKNAEKAANRILLRGGK HHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11162100 [H]