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The map label for this gene is yurN [H]

Identifier: 239618355

GI number: 239618355

Start: 2116132

End: 2116995

Strand: Direct

Name: yurN [H]

Synonym: Kole_1993

Alternate gene names: 239618355

Gene position: 2116132-2116995 (Clockwise)

Preceding gene: 239618354

Following gene: 239618356

Centisome position: 91.92

GC content: 41.09

Gene sequence:

>864_bases
GTGAAAAAACGGCAGCTTTACGGATACCTTTTCATATTACCTGCCATGTCATTATTTGTTGTTTTTCTGTTTATACCGGT
TGTAATGGCCCTTGTAATGGCCTTTCAAGAAGTTGGCGTATGGGGGTCAGAATGGGTTGGTTTTGAGAATTTCAAAGAGA
TTATCCATTGGGAAGATTTTTGGGTAGCATTGAGAAATACTGCATTATACACTTCGATAGTAGTTTTCAAAAACATATCT
GTTGCCCTCGTAATCGCTAGTTTGTTGCTATCGTTGAAAAACAAATGGCAGAGTTTTTTTAGGGCGGCGTATTATCTTCC
AACCGTTACTTCTGCCGTCGTTATATCCCTGATTTGGGGCTGGCTTTTGAATGCATCATTTGGGCCGATAAATATGTTTT
TACAAAAGCTCGGGCTTCAACCTGTTCCCTGGCTGGTGGATCCGGATATTGCAATGTGGTCGATTATCTTAACAGATATG
GTGATTGCGCCGGGTTCAGGGATCATTCTCTTTCTTGCAGCGATGAATAATATCCCGAAGACGTACTATGAAGCTGCCGA
TATCGATGGGGCTAACTGGTTTGTTAAATGGTGGAGGATCACAGTACCGCTTGTGAAACCAACCATGTTGTATCTGACCA
TCAGCTACACTATCGTTGCGATGAGTGTGTTCGATAAAATATACATTCTGACACATGGTGGCCCCGGGAACGCAACCATT
ACTTTTGTGTATTTGATATATAACACGGCCTTTAGAGATTTCAATTATGGTCTCGCTTCGGCACTTTCTGTTATATTCTT
TGGAATTGCTGTGGTTATATCGTTCTTCCAATTCCGTATGATGTCACAATCATACGAATTTTAA

Upstream 100 bases:

>100_bases
ACAGATACAATTAGCATTACTCGAGAGAATTTCACCGGAGGATGCGTTGAAGAATGCTGAAAAAGCGGCAAATAGAATAC
TGTTAAGAGGAGGCAAATAG

Downstream 100 bases:

>100_bases
TGAGATTCGGGGAGTTGGTAGCTGGTGAACAAGAAAGCGTTGTGGATCTTTGTTATGGTTTTCCTCTTTCTATGGGCATT
CATGACCTTGTTTCCAATGT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MKKRQLYGYLFILPAMSLFVVFLFIPVVMALVMAFQEVGVWGSEWVGFENFKEIIHWEDFWVALRNTALYTSIVVFKNIS
VALVIASLLLSLKNKWQSFFRAAYYLPTVTSAVVISLIWGWLLNASFGPINMFLQKLGLQPVPWLVDPDIAMWSIILTDM
VIAPGSGIILFLAAMNNIPKTYYEAADIDGANWFVKWWRITVPLVKPTMLYLTISYTIVAMSVFDKIYILTHGGPGNATI
TFVYLIYNTAFRDFNYGLASALSVIFFGIAVVISFFQFRMMSQSYEF

Sequences:

>Translated_287_residues
MKKRQLYGYLFILPAMSLFVVFLFIPVVMALVMAFQEVGVWGSEWVGFENFKEIIHWEDFWVALRNTALYTSIVVFKNIS
VALVIASLLLSLKNKWQSFFRAAYYLPTVTSAVVISLIWGWLLNASFGPINMFLQKLGLQPVPWLVDPDIAMWSIILTDM
VIAPGSGIILFLAAMNNIPKTYYEAADIDGANWFVKWWRITVPLVKPTMLYLTISYTIVAMSVFDKIYILTHGGPGNATI
TFVYLIYNTAFRDFNYGLASALSVIFFGIAVVISFFQFRMMSQSYEF
>Mature_287_residues
MKKRQLYGYLFILPAMSLFVVFLFIPVVMALVMAFQEVGVWGSEWVGFENFKEIIHWEDFWVALRNTALYTSIVVFKNIS
VALVIASLLLSLKNKWQSFFRAAYYLPTVTSAVVISLIWGWLLNASFGPINMFLQKLGLQPVPWLVDPDIAMWSIILTDM
VIAPGSGIILFLAAMNNIPKTYYEAADIDGANWFVKWWRITVPLVKPTMLYLTISYTIVAMSVFDKIYILTHGGPGNATI
TFVYLIYNTAFRDFNYGLASALSVIFFGIAVVISFFQFRMMSQSYEF

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=288, Percent_Identity=26.7361111111111, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI1790465, Length=269, Percent_Identity=27.8810408921933, Blast_Score=81, Evalue=9e-17,
Organism=Escherichia coli, GI1787570, Length=228, Percent_Identity=28.9473684210526, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32752; Mature: 32752

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRQLYGYLFILPAMSLFVVFLFIPVVMALVMAFQEVGVWGSEWVGFENFKEIIHWEDF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
WVALRNTALYTSIVVFKNISVALVIASLLLSLKNKWQSFFRAAYYLPTVTSAVVISLIWG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLLNASFGPINMFLQKLGLQPVPWLVDPDIAMWSIILTDMVIAPGSGIILFLAAMNNIPK
HHHCCCCCHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCH
TYYEAADIDGANWFVKWWRITVPLVKPTMLYLTISYTIVAMSVFDKIYILTHGGPGNATI
HHHHHCCCCCCHHEEEEEEEEECHHCHHHHEEHHHHHHHHHHHHCEEEEEEECCCCCCCE
TFVYLIYNTAFRDFNYGLASALSVIFFGIAVVISFFQFRMMSQSYEF
EEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKRQLYGYLFILPAMSLFVVFLFIPVVMALVMAFQEVGVWGSEWVGFENFKEIIHWEDF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
WVALRNTALYTSIVVFKNISVALVIASLLLSLKNKWQSFFRAAYYLPTVTSAVVISLIWG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLLNASFGPINMFLQKLGLQPVPWLVDPDIAMWSIILTDMVIAPGSGIILFLAAMNNIPK
HHHCCCCCHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCH
TYYEAADIDGANWFVKWWRITVPLVKPTMLYLTISYTIVAMSVFDKIYILTHGGPGNATI
HHHHHCCCCCCHHEEEEEEEEECHHCHHHHEEHHHHHHHHHHHHCEEEEEEECCCCCCCE
TFVYLIYNTAFRDFNYGLASALSVIFFGIAVVISFFQFRMMSQSYEF
EEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]