| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is malE [C]
Identifier: 239618339
GI number: 239618339
Start: 2095710
End: 2096936
Strand: Direct
Name: malE [C]
Synonym: Kole_1976
Alternate gene names: 239618339
Gene position: 2095710-2096936 (Clockwise)
Preceding gene: 239618338
Following gene: 239618340
Centisome position: 91.03
GC content: 41.73
Gene sequence:
>1227_bases ATGAGAAAAGTTCTTCTTTTGGCGCTTGTAATGTCATTATTGGTTGTAGCTCTTGGGGCAATAAAGATTAGTTACATGAC ATTCTCAGCTGTCCCAAATCATGAAGAAACTTTGAGAGAAATCGCCAAGGCTTTCGAGGCTCAGAATCAAGGGATACGGG TGAATCTGATATTTGTACCATGGAGCGACTATTTTTTGAAGTTGTCCACGATGTTTGCAGGAGGAACCCCCCCTGATGCG TTCGAGATCAACTATGAGAATTTTGTAGAATATGCAGCAGATGGACTTTTATTGCCCCTGGACGGACTAAACGAAAGCAA CCAGTTCAAAGCAGTCGAAGTGTTTTCCGAAAAGGCTTATAACGCTTTTTCTTATCGAGGTAGACAGTACGGATTCCCTG AAAGTTTTTCCACAGTGGTTCTTTTCTACAACAAGGAACTCTTCGACAAAAAGGGTGTTGAGTATCCTTCACCTGATTGG AGTTGGATTGATGAATTCAATGCTGCTGTGAAATTAACGGACAAAGAAAAGGGAATATGGGGAGTCTATCAGCCAATACA ATTCTGGGAATATTACAAAGTTATCGCTCAGAATGGAGGAGCAATATTCAACAGCGAAAATGAGGTCACAGTAAATAACA TCGCTGGAGTAAACGCACTGAAATGGCTTATAGACAAACCAAAATACGGAATCATGCCGTCGGAAGAAGAAGCTGCCGGC CTGAGCTCAGAGGATCTTTTTGTCATGGGAAAGCTCGCAATGGTCCATACGGGAATATGGATGTTCAACAAATTTAGAGA AGAGACACGATTTGAATGGGATATAGAAGTTGAACCCGGAATGTCCACAAAGGCGACTCATTATTTCGCGAATGCAGTTG TTGCTTCTGCGAGTACTCCACACAAAGAAGCAGTGTGGAAATGGTTGAAATTCCTTACCACTGATGAATACAGCGTAAAA ACAAGAATTGAAAAAGGCTGGGAATTGCCGGCAGTCAAGGATCCTGATCTCATAAGTGAGTTCCTTAAGAGTGATGTCGC ACCGAGAAACAAAAAAGCCATTTTTGATTCTCTTGAATGGGCTATCGTACCACCTGTCGTTAAAGGTTGGAGTGCCCTCG CAGATGTTGTGAATAAAGAAATCGATGCAGCAAAATTCGGGATGAAGAGTCCTGAAGAAGCTTTAAATGACTTAGTAGTG TTGTTAAAGAACAAGATATCCGAATAA
Upstream 100 bases:
>100_bases TTATTCCTATTTTGATTGTTTATATCGTTGCTCAGAAGTGGTTTATTGAGGGCATTTCAGCAACAGGATTAAAGGGTTAA TCAAACAGGAGGTGTGAGGT
Downstream 100 bases:
>100_bases AGGGAGTTGAAGTTTTCATGCGGAAGATCCAGCACTTACCATTTGGAATAGATGATCCATATATAAATGCAGCATACACT GCCCAAAGGATTCCCAACGA
Product: extracellular solute-binding protein family 1
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MRKVLLLALVMSLLVVALGAIKISYMTFSAVPNHEETLREIAKAFEAQNQGIRVNLIFVPWSDYFLKLSTMFAGGTPPDA FEINYENFVEYAADGLLLPLDGLNESNQFKAVEVFSEKAYNAFSYRGRQYGFPESFSTVVLFYNKELFDKKGVEYPSPDW SWIDEFNAAVKLTDKEKGIWGVYQPIQFWEYYKVIAQNGGAIFNSENEVTVNNIAGVNALKWLIDKPKYGIMPSEEEAAG LSSEDLFVMGKLAMVHTGIWMFNKFREETRFEWDIEVEPGMSTKATHYFANAVVASASTPHKEAVWKWLKFLTTDEYSVK TRIEKGWELPAVKDPDLISEFLKSDVAPRNKKAIFDSLEWAIVPPVVKGWSALADVVNKEIDAAKFGMKSPEEALNDLVV LLKNKISE
Sequences:
>Translated_408_residues MRKVLLLALVMSLLVVALGAIKISYMTFSAVPNHEETLREIAKAFEAQNQGIRVNLIFVPWSDYFLKLSTMFAGGTPPDA FEINYENFVEYAADGLLLPLDGLNESNQFKAVEVFSEKAYNAFSYRGRQYGFPESFSTVVLFYNKELFDKKGVEYPSPDW SWIDEFNAAVKLTDKEKGIWGVYQPIQFWEYYKVIAQNGGAIFNSENEVTVNNIAGVNALKWLIDKPKYGIMPSEEEAAG LSSEDLFVMGKLAMVHTGIWMFNKFREETRFEWDIEVEPGMSTKATHYFANAVVASASTPHKEAVWKWLKFLTTDEYSVK TRIEKGWELPAVKDPDLISEFLKSDVAPRNKKAIFDSLEWAIVPPVVKGWSALADVVNKEIDAAKFGMKSPEEALNDLVV LLKNKISE >Mature_408_residues MRKVLLLALVMSLLVVALGAIKISYMTFSAVPNHEETLREIAKAFEAQNQGIRVNLIFVPWSDYFLKLSTMFAGGTPPDA FEINYENFVEYAADGLLLPLDGLNESNQFKAVEVFSEKAYNAFSYRGRQYGFPESFSTVVLFYNKELFDKKGVEYPSPDW SWIDEFNAAVKLTDKEKGIWGVYQPIQFWEYYKVIAQNGGAIFNSENEVTVNNIAGVNALKWLIDKPKYGIMPSEEEAAG LSSEDLFVMGKLAMVHTGIWMFNKFREETRFEWDIEVEPGMSTKATHYFANAVVASASTPHKEAVWKWLKFLTTDEYSVK TRIEKGWELPAVKDPDLISEFLKSDVAPRNKKAIFDSLEWAIVPPVVKGWSALADVVNKEIDAAKFGMKSPEEALNDLVV LLKNKISE
Specific function: Probably part of an ABC transporter complex [H]
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR006061 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 46210; Mature: 46210
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKVLLLALVMSLLVVALGAIKISYMTFSAVPNHEETLREIAKAFEAQNQGIRVNLIFVP CHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEEEE WSDYFLKLSTMFAGGTPPDAFEINYENFVEYAADGLLLPLDGLNESNQFKAVEVFSEKAY CCHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHH NAFSYRGRQYGFPESFSTVVLFYNKELFDKKGVEYPSPDWSWIDEFNAAVKLTDKEKGIW HHHHCCCCCCCCCCCCCEEEEEECHHHHHHCCCCCCCCCCHHHHCCCCEEEEECCCCCCC GVYQPIQFWEYYKVIAQNGGAIFNSENEVTVNNIAGVNALKWLIDKPKYGIMPSEEEAAG CHHHHHHHHHHHHHHHCCCCEEECCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCHHHCC LSSEDLFVMGKLAMVHTGIWMFNKFREETRFEWDIEVEPGMSTKATHYFANAVVASASTP CCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCC HKEAVWKWLKFLTTDEYSVKTRIEKGWELPAVKDPDLISEFLKSDVAPRNKKAIFDSLEW HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCC AIVPPVVKGWSALADVVNKEIDAAKFGMKSPEEALNDLVVLLKNKISE EEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRKVLLLALVMSLLVVALGAIKISYMTFSAVPNHEETLREIAKAFEAQNQGIRVNLIFVP CHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEEEE WSDYFLKLSTMFAGGTPPDAFEINYENFVEYAADGLLLPLDGLNESNQFKAVEVFSEKAY CCHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHH NAFSYRGRQYGFPESFSTVVLFYNKELFDKKGVEYPSPDWSWIDEFNAAVKLTDKEKGIW HHHHCCCCCCCCCCCCCEEEEEECHHHHHHCCCCCCCCCCHHHHCCCCEEEEECCCCCCC GVYQPIQFWEYYKVIAQNGGAIFNSENEVTVNNIAGVNALKWLIDKPKYGIMPSEEEAAG CHHHHHHHHHHHHHHHCCCCEEECCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCHHHCC LSSEDLFVMGKLAMVHTGIWMFNKFREETRFEWDIEVEPGMSTKATHYFANAVVASASTP CCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCC HKEAVWKWLKFLTTDEYSVKTRIEKGWELPAVKDPDLISEFLKSDVAPRNKKAIFDSLEW HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCC AIVPPVVKGWSALADVVNKEIDAAKFGMKSPEEALNDLVVLLKNKISE EEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA