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The map label for this gene is yurN [H]

Identifier: 239618337

GI number: 239618337

Start: 2093996

End: 2094877

Strand: Direct

Name: yurN [H]

Synonym: Kole_1974

Alternate gene names: 239618337

Gene position: 2093996-2094877 (Clockwise)

Preceding gene: 239618336

Following gene: 239618338

Centisome position: 90.96

GC content: 37.53

Gene sequence:

>882_bases
GTGAACTCAGTGAAAAGAAAAGGAGATTTAAAATACCTTATCTTCTTTTTAACTCCAAGCTTGATATTCCTATTTCTTTT
CCAGATTCTTCCTATAACCTATTCATTAATGCTGAGCTTTATGCGATGGAACATAAGAACTCCTGCCGTGTGGATAGGGC
TGGGTAACTATACAAATCTGTTTCATGACAAAGAGTTTTGGTTATCTGTGTGGCATACATTCCAGTATATTTTGATGTAT
GTTCCATTAGTTATCATCGGCGGAATGATTTTAGCTTTGTTGGTTAATAAAAAGATTAAGTTTCAAAATTTCTTTAAAGT
ATCTTTCTTCATTCCGGTTATTTCTTCCTGGGTCGCAGTATCACTCATTTGGAAAGGCTTACTAAATCCGAAGTACGGTT
TTATAAATCAAATTCTCTCATGGTTTGGTATTAAGGGCCCTGCATGGCTCTTTGATCCTGGATGGGCTATGACCGCCATT
GTTTTTGCCAGTGTGTGGAAAGATGTTGGATTTATCATGGTAATCCTTCTTGGGGGTCTTAGCAACATACCAAAGCATTT
ATACGAAGCCTCAGTAATAGATGGAGCTACACCCTGGAAACAGTTCTGGAGAATCACTTTACCATTGCTTACCCCAACAT
TATTTTTTGCTTTGATGATCACGCTTATCAATTCGTTCCAGATTTTTGATCAGGTATGGATAATGACAAATGGAGGACCT
GCGGGGGCTACTTCCGTTATTGTTGAGCGAATCTATAGAAATGCTTTCAGTTACTCAAAAATGGGATATGCTGCGGCGAT
GTCCTGGTTTCTTTTTGCGTTAATCTTTGGCATATCTTTTCTACAAAACAGATATCAAAAGAAATGGGTGTTTTATTCAT
GA

Upstream 100 bases:

>100_bases
TGTTTAATGTTGACGACCTGGGAGAAGTAGCATGGAACCTTGGGGTAATTTTTGTACTTATGGATAATCTTTTTCTCACT
ACTTCTCACAATGAAAGTCG

Downstream 100 bases:

>100_bases
AAGCAAAAAAGATTGTTCTGTATGTTTTGCTATTTGCTTTTGCGATAACCACATTACTCCCTTTAGTATGGACAATATCT
ACATCACTAAAGACCAGATA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MNSVKRKGDLKYLIFFLTPSLIFLFLFQILPITYSLMLSFMRWNIRTPAVWIGLGNYTNLFHDKEFWLSVWHTFQYILMY
VPLVIIGGMILALLVNKKIKFQNFFKVSFFIPVISSWVAVSLIWKGLLNPKYGFINQILSWFGIKGPAWLFDPGWAMTAI
VFASVWKDVGFIMVILLGGLSNIPKHLYEASVIDGATPWKQFWRITLPLLTPTLFFALMITLINSFQIFDQVWIMTNGGP
AGATSVIVERIYRNAFSYSKMGYAAAMSWFLFALIFGISFLQNRYQKKWVFYS

Sequences:

>Translated_293_residues
MNSVKRKGDLKYLIFFLTPSLIFLFLFQILPITYSLMLSFMRWNIRTPAVWIGLGNYTNLFHDKEFWLSVWHTFQYILMY
VPLVIIGGMILALLVNKKIKFQNFFKVSFFIPVISSWVAVSLIWKGLLNPKYGFINQILSWFGIKGPAWLFDPGWAMTAI
VFASVWKDVGFIMVILLGGLSNIPKHLYEASVIDGATPWKQFWRITLPLLTPTLFFALMITLINSFQIFDQVWIMTNGGP
AGATSVIVERIYRNAFSYSKMGYAAAMSWFLFALIFGISFLQNRYQKKWVFYS
>Mature_293_residues
MNSVKRKGDLKYLIFFLTPSLIFLFLFQILPITYSLMLSFMRWNIRTPAVWIGLGNYTNLFHDKEFWLSVWHTFQYILMY
VPLVIIGGMILALLVNKKIKFQNFFKVSFFIPVISSWVAVSLIWKGLLNPKYGFINQILSWFGIKGPAWLFDPGWAMTAI
VFASVWKDVGFIMVILLGGLSNIPKHLYEASVIDGATPWKQFWRITLPLLTPTLFFALMITLINSFQIFDQVWIMTNGGP
AGATSVIVERIYRNAFSYSKMGYAAAMSWFLFALIFGISFLQNRYQKKWVFYS

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=246, Percent_Identity=31.7073170731707, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1790465, Length=252, Percent_Identity=34.1269841269841, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1787570, Length=259, Percent_Identity=26.2548262548263, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33989; Mature: 33989

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSVKRKGDLKYLIFFLTPSLIFLFLFQILPITYSLMLSFMRWNIRTPAVWIGLGNYTNL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHH
FHDKEFWLSVWHTFQYILMYVPLVIIGGMILALLVNKKIKFQNFFKVSFFIPVISSWVAV
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
SLIWKGLLNPKYGFINQILSWFGIKGPAWLFDPGWAMTAIVFASVWKDVGFIMVILLGGL
HHHHHHHCCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCH
SNIPKHLYEASVIDGATPWKQFWRITLPLLTPTLFFALMITLINSFQIFDQVWIMTNGGP
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
AGATSVIVERIYRNAFSYSKMGYAAAMSWFLFALIFGISFLQNRYQKKWVFYS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNSVKRKGDLKYLIFFLTPSLIFLFLFQILPITYSLMLSFMRWNIRTPAVWIGLGNYTNL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHH
FHDKEFWLSVWHTFQYILMYVPLVIIGGMILALLVNKKIKFQNFFKVSFFIPVISSWVAV
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
SLIWKGLLNPKYGFINQILSWFGIKGPAWLFDPGWAMTAIVFASVWKDVGFIMVILLGGL
HHHHHHHCCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCH
SNIPKHLYEASVIDGATPWKQFWRITLPLLTPTLFFALMITLINSFQIFDQVWIMTNGGP
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
AGATSVIVERIYRNAFSYSKMGYAAAMSWFLFALIFGISFLQNRYQKKWVFYS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]