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The map label for this gene is yebC [C]

Identifier: 239618298

GI number: 239618298

Start: 2055729

End: 2056487

Strand: Reverse

Name: yebC [C]

Synonym: Kole_1935

Alternate gene names: 239618298

Gene position: 2056487-2055729 (Counterclockwise)

Preceding gene: 239618299

Following gene: 239618297

Centisome position: 89.33

GC content: 45.06

Gene sequence:

>759_bases
ATGTCAGGTCACAATAAGTGGGCGAATATTAAACACAGAAAGATGGCCCAGGACGCAAAGAAGTCCAAGATCTTCACCAA
AATAATAAGGGAGCTAATGGTAGCCGCACGTGAAGGCGGAACAGACCCAAACACGAATAATGCTCTTAGAGCCGCCATAG
AAAGAGCAAAGGCTGCCAACATGCCGAAAGACACCATGGAAAAGGCTATCAAAAAGGGTGCTGGAGAACTTGAAGGACAG
TCCTTCGTAGAAGCTTTATATGAAGTTTACGCTCCCGGTGGAGTTGCCATGCTTATAAGAGCTCTCACAGACAACAAAAA
CAGGACGGCCCAGGAAATCAGGCATCTGCTTTCCAAACACGGTGGGAACATGGCTGAAAGCGGTAGTGTTGCCTGGATGT
TCGAAAGAAAAGGTGTTATAACCGTCCCAAGATCCGAGATTTCTGACATGGATGAATTTCAGCTTCTTGCAATTGACGCC
GGCGCCGAAGACATTCAGGATGAAGAGGATCCTGTTAGAATAATAACTGCTCCTGAGGAAGCATCTAATGTTAAAAACGC
ACTGGAAGAAAACGGTTATACGGCTTCTTACGAACTGACCTATATCCCGAAGAACACCGTATCTGTCAGTGGTAACGACG
CTGAAAAACTTTTGAAGCTTCTAAATGTCCTCGAAGATAACGATGATGTACAGGAAGTTTACGCAAACTTCGAGATGGAT
GACTCCGAAATGGAAGCTTTGATGGAGAAAATGCAGTAA

Upstream 100 bases:

>100_bases
AAGAGCCTTTCTGAAAAAGGAATTTATGTTTTTGTGCTTGAAGCTTATAAAGATGGTGTACCCACGTCTAATATTCTGGA
TTATATAGGAGGGAAAAAGC

Downstream 100 bases:

>100_bases
CATTCAGCCGCCTCTTAAAGAGGCGGCTTTGAGTCTTCAAATGACTTTCCCGAGGTGATACAGTTGCTTTCTTCTTTTGG
AATCGTTCTGGTGGTCATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MSGHNKWANIKHRKMAQDAKKSKIFTKIIRELMVAAREGGTDPNTNNALRAAIERAKAANMPKDTMEKAIKKGAGELEGQ
SFVEALYEVYAPGGVAMLIRALTDNKNRTAQEIRHLLSKHGGNMAESGSVAWMFERKGVITVPRSEISDMDEFQLLAIDA
GAEDIQDEEDPVRIITAPEEASNVKNALEENGYTASYELTYIPKNTVSVSGNDAEKLLKLLNVLEDNDDVQEVYANFEMD
DSEMEALMEKMQ

Sequences:

>Translated_252_residues
MSGHNKWANIKHRKMAQDAKKSKIFTKIIRELMVAAREGGTDPNTNNALRAAIERAKAANMPKDTMEKAIKKGAGELEGQ
SFVEALYEVYAPGGVAMLIRALTDNKNRTAQEIRHLLSKHGGNMAESGSVAWMFERKGVITVPRSEISDMDEFQLLAIDA
GAEDIQDEEDPVRIITAPEEASNVKNALEENGYTASYELTYIPKNTVSVSGNDAEKLLKLLNVLEDNDDVQEVYANFEMD
DSEMEALMEKMQ
>Mature_251_residues
SGHNKWANIKHRKMAQDAKKSKIFTKIIRELMVAAREGGTDPNTNNALRAAIERAKAANMPKDTMEKAIKKGAGELEGQS
FVEALYEVYAPGGVAMLIRALTDNKNRTAQEIRHLLSKHGGNMAESGSVAWMFERKGVITVPRSEISDMDEFQLLAIDAG
AEDIQDEEDPVRIITAPEEASNVKNALEENGYTASYELTYIPKNTVSVSGNDAEKLLKLLNVLEDNDDVQEVYANFEMDD
SEMEALMEKMQ

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=250, Percent_Identity=33.2, Blast_Score=138, Evalue=4e-33,
Organism=Escherichia coli, GI1788171, Length=243, Percent_Identity=48.1481481481481, Blast_Score=227, Evalue=7e-61,
Organism=Escherichia coli, GI1788294, Length=233, Percent_Identity=38.1974248927039, Blast_Score=151, Evalue=3e-38,
Organism=Caenorhabditis elegans, GI17556100, Length=248, Percent_Identity=25, Blast_Score=89, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6321458, Length=263, Percent_Identity=33.0798479087452, Blast_Score=112, Evalue=8e-26,
Organism=Drosophila melanogaster, GI24583305, Length=250, Percent_Identity=28.8, Blast_Score=92, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1935_KOSOT (C5CGU7)

Other databases:

- EMBL:   CP001634
- RefSeq:   YP_002941620.1
- ProteinModelPortal:   C5CGU7
- GeneID:   7968426
- GenomeReviews:   CP001634_GR
- KEGG:   kol:Kole_1935
- ProtClustDB:   PRK00110
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 27969; Mature: 27838

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHNKWANIKHRKMAQDAKKSKIFTKIIRELMVAAREGGTDPNTNNALRAAIERAKAAN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC
MPKDTMEKAIKKGAGELEGQSFVEALYEVYAPGGVAMLIRALTDNKNRTAQEIRHLLSKH
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHC
GGNMAESGSVAWMFERKGVITVPRSEISDMDEFQLLAIDAGAEDIQDEEDPVRIITAPEE
CCCCCCCCCEEEEEECCCEEEECHHHHCCCCCEEEEEEECCCHHCCCCCCCEEEEECCHH
ASNVKNALEENGYTASYELTYIPKNTVSVSGNDAEKLLKLLNVLEDNDDVQEVYANFEMD
HHHHHHHHHHCCCEEEEEEEEECCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHCCCCC
DSEMEALMEKMQ
HHHHHHHHHHCC
>Mature Secondary Structure 
SGHNKWANIKHRKMAQDAKKSKIFTKIIRELMVAAREGGTDPNTNNALRAAIERAKAAN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC
MPKDTMEKAIKKGAGELEGQSFVEALYEVYAPGGVAMLIRALTDNKNRTAQEIRHLLSKH
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHC
GGNMAESGSVAWMFERKGVITVPRSEISDMDEFQLLAIDAGAEDIQDEEDPVRIITAPEE
CCCCCCCCCEEEEEECCCEEEECHHHHCCCCCEEEEEEECCCHHCCCCCCCEEEEECCHH
ASNVKNALEENGYTASYELTYIPKNTVSVSGNDAEKLLKLLNVLEDNDDVQEVYANFEMD
HHHHHHHHHHCCCEEEEEEEEECCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHCCCCC
DSEMEALMEKMQ
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA