| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239618299
Identifier: 239618299
GI number: 239618299
Start: 2056471
End: 2057142
Strand: Reverse
Name: 239618299
Synonym: Kole_1936
Alternate gene names: NA
Gene position: 2057142-2056471 (Counterclockwise)
Preceding gene: 239618303
Following gene: 239618298
Centisome position: 89.36
GC content: 38.69
Gene sequence:
>672_bases TTGCCTAAATATGTATTGCGAATGGTTAAGGGAGGTATTATAAGGTATCTTTCCCACCAGGAGACAAGTACGGCCATTGA AAGAACCCTTCGACGCGCAAAGCTTCCGTTGTCTTTTACAAAAGGATACCACCCGCACATAAAGTTGAGTTATTTACCCG CTGTTCTAACCGGGGTAGCTACTGCAGCTATCTATATGACCATAGAAACAGAAAGCCCTGTTACTGATATAACAGAAAGG ATTTCGAAAGCGGCACCTTTTGGGATATCATTACTCAAAGTCTGGGAGGTTGATGAAAAATTTGATTTGCGTTCCGTAGC TGATTCCTACCAATATTTCTTGTTCTTGCCAAAAAACTGCTTCGATCCATCTCGTTTTTCCGAAGCTACAGAGATAACCA AACAAACGAAGAAATCTCGGAAAATCTTTTTAGCTAAAGAAACGTATCAACATCTTTCCGTCTCAGCGCTGAGGAACTAC TTTATGGTAAAATATTTCCAGCCGATGGATAAATCATTGTCATATCAGCATCTTATAAAAATAATGAGCAAAGAAAAGAG CCTTTCTGAAAAAGGAATTTATGTTTTTGTGCTTGAAGCTTATAAAGATGGTGTACCCACGTCTAATATTCTGGATTATA TAGGAGGGAAAAAGCATGTCAGGTCACAATAA
Upstream 100 bases:
>100_bases ACCACCATTGTAAAATTTGGACATTTCGCATACAATTATACTGCAGTGAAGTGCCTTTAGAGAATTGTTTTTACTAAATT TTGAATTGGAGATGGGATCT
Downstream 100 bases:
>100_bases GTGGGCGAATATTAAACACAGAAAGATGGCCCAGGACGCAAAGAAGTCCAAGATCTTCACCAAAATAATAAGGGAGCTAA TGGTAGCCGCACGTGAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MPKYVLRMVKGGIIRYLSHQETSTAIERTLRRAKLPLSFTKGYHPHIKLSYLPAVLTGVATAAIYMTIETESPVTDITER ISKAAPFGISLLKVWEVDEKFDLRSVADSYQYFLFLPKNCFDPSRFSEATEITKQTKKSRKIFLAKETYQHLSVSALRNY FMVKYFQPMDKSLSYQHLIKIMSKEKSLSEKGIYVFVLEAYKDGVPTSNILDYIGGKKHVRSQ
Sequences:
>Translated_223_residues MPKYVLRMVKGGIIRYLSHQETSTAIERTLRRAKLPLSFTKGYHPHIKLSYLPAVLTGVATAAIYMTIETESPVTDITER ISKAAPFGISLLKVWEVDEKFDLRSVADSYQYFLFLPKNCFDPSRFSEATEITKQTKKSRKIFLAKETYQHLSVSALRNY FMVKYFQPMDKSLSYQHLIKIMSKEKSLSEKGIYVFVLEAYKDGVPTSNILDYIGGKKHVRSQ >Mature_222_residues PKYVLRMVKGGIIRYLSHQETSTAIERTLRRAKLPLSFTKGYHPHIKLSYLPAVLTGVATAAIYMTIETESPVTDITERI SKAAPFGISLLKVWEVDEKFDLRSVADSYQYFLFLPKNCFDPSRFSEATEITKQTKKSRKIFLAKETYQHLSVSALRNYF MVKYFQPMDKSLSYQHLIKIMSKEKSLSEKGIYVFVLEAYKDGVPTSNILDYIGGKKHVRSQ
Specific function: Unknown
COG id: COG5011
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25654; Mature: 25523
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKYVLRMVKGGIIRYLSHQETSTAIERTLRRAKLPLSFTKGYHPHIKLSYLPAVLTGVA CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHCCCCCCCEEHHHHHHHHHHHH TAAIYMTIETESPVTDITERISKAAPFGISLLKVWEVDEKFDLRSVADSYQYFLFLPKNC HHHEEEEEECCCCHHHHHHHHHHCCCCCHHHHHEECCCCCCHHHHHHCCCEEEEEECCCC FDPSRFSEATEITKQTKKSRKIFLAKETYQHLSVSALRNYFMVKYFQPMDKSLSYQHLIK CCHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH IMSKEKSLSEKGIYVFVLEAYKDGVPTSNILDYIGGKKHVRSQ HHHHHHCCCCCCEEEEEEEHHCCCCCHHHHHHHHCCCHHCCCC >Mature Secondary Structure PKYVLRMVKGGIIRYLSHQETSTAIERTLRRAKLPLSFTKGYHPHIKLSYLPAVLTGVA CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHCCCCCCCEEHHHHHHHHHHHH TAAIYMTIETESPVTDITERISKAAPFGISLLKVWEVDEKFDLRSVADSYQYFLFLPKNC HHHEEEEEECCCCHHHHHHHHHHCCCCCHHHHHEECCCCCCHHHHHHCCCEEEEEECCCC FDPSRFSEATEITKQTKKSRKIFLAKETYQHLSVSALRNYFMVKYFQPMDKSLSYQHLIK CCHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH IMSKEKSLSEKGIYVFVLEAYKDGVPTSNILDYIGGKKHVRSQ HHHHHHCCCCCCEEEEEEEHHCCCCCHHHHHHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA