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The map label for this gene is ytqA [H]

Identifier: 239618120

GI number: 239618120

Start: 1883100

End: 1884017

Strand: Direct

Name: ytqA [H]

Synonym: Kole_1752

Alternate gene names: 239618120

Gene position: 1883100-1884017 (Clockwise)

Preceding gene: 239618119

Following gene: 239618121

Centisome position: 81.8

GC content: 41.39

Gene sequence:

>918_bases
TTGAATCATAAACCTTACAGGCACCTGAAAGGTTATCTCATAGAACGTTATGGTGAAGTGGTTTATAGAATACCGATAGA
TGCCGGTTTTACCTGTCCCAACAAAAACGGAACCAAGGGACGGGGCGGTTGTATTTATTGCGATCCAACCGGCAGCGGTT
TCAGCGTTGACGGTCAGAAGAGTATAAGGGAGCAGATGTTAGAAAGAATAGAAAAGCTGCGTGCAAAAGGTATAAAAAAA
TACATGGCATATTTCCAGGCGAACTCCAACACCTACGCACCCGTCAAAAAATTGAAAGAATTATACGATTCAGCCATCTC
TGACGACATAGTAATCCTTGACGTATCGACACGTCCCGATCTCGCAAGCGAAGAGACTTTAGAATTACTTGAGAGCTATA
AAGAAAAACTCGACGTTATAATAGAATTTGGTTTACAAACAGCGAATTTCTGGACTCTGAAAAAACTGAATCGTGGTCAT
ACCCTCGCAGAATTTATAGATGCCGTAATCAGAGCTAAAAAACATGGTCTTGAAGTGGTAGCCCATGTTATCGTAAACTT
GCCATGGGATACCATGACAGACGTAATAGAAACCGCTAAGATTCTGTCGGCGTTGAGCGTTGACGGAGTAAAGATACATT
CTCTCTACGTGGTTGAAGGCACTGCACTCGGAAAAATGTACAAAAAAGGGCTCATTCAGATATGCGATTTACATGAATAC
ATAGAAAGGGTTATCACCTTTTTGGAGTTTCTGGATCCGGAGATTGTGATTCACAGGCTTGTTGCGGATCCGCCAAAAGA
AGGAACACTCTTTGCAAATTGGGGTCTTCCCAAGATAGAGATAATAAATAGAATCGAGAAGAAGATGAAAGAGGAAAACA
GACTTCAGGGAGGAAGATTTAACTACCTTAACAGATAA

Upstream 100 bases:

>100_bases
TTTAACGGCAAATGGGTCTATATATTCAGAGGTACCGAAAATTCAGTGAAAGAAACCGCCAGAAAGTTCAAATCCTTTAT
GAAGGAGTTGAAACGTTCAA

Downstream 100 bases:

>100_bases
TGGTTATGATTAAAGTGTTGACTGGAGAGTGAGGCGGGTGGTCGCGGCGTTAGCCGAGGAAAGTCCGGACTCCTTGGGCG
AGGATGCTGGGTAACACCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MNHKPYRHLKGYLIERYGEVVYRIPIDAGFTCPNKNGTKGRGGCIYCDPTGSGFSVDGQKSIREQMLERIEKLRAKGIKK
YMAYFQANSNTYAPVKKLKELYDSAISDDIVILDVSTRPDLASEETLELLESYKEKLDVIIEFGLQTANFWTLKKLNRGH
TLAEFIDAVIRAKKHGLEVVAHVIVNLPWDTMTDVIETAKILSALSVDGVKIHSLYVVEGTALGKMYKKGLIQICDLHEY
IERVITFLEFLDPEIVIHRLVADPPKEGTLFANWGLPKIEIINRIEKKMKEENRLQGGRFNYLNR

Sequences:

>Translated_305_residues
MNHKPYRHLKGYLIERYGEVVYRIPIDAGFTCPNKNGTKGRGGCIYCDPTGSGFSVDGQKSIREQMLERIEKLRAKGIKK
YMAYFQANSNTYAPVKKLKELYDSAISDDIVILDVSTRPDLASEETLELLESYKEKLDVIIEFGLQTANFWTLKKLNRGH
TLAEFIDAVIRAKKHGLEVVAHVIVNLPWDTMTDVIETAKILSALSVDGVKIHSLYVVEGTALGKMYKKGLIQICDLHEY
IERVITFLEFLDPEIVIHRLVADPPKEGTLFANWGLPKIEIINRIEKKMKEENRLQGGRFNYLNR
>Mature_305_residues
MNHKPYRHLKGYLIERYGEVVYRIPIDAGFTCPNKNGTKGRGGCIYCDPTGSGFSVDGQKSIREQMLERIEKLRAKGIKK
YMAYFQANSNTYAPVKKLKELYDSAISDDIVILDVSTRPDLASEETLELLESYKEKLDVIIEFGLQTANFWTLKKLNRGH
TLAEFIDAVIRAKKHGLEVVAHVIVNLPWDTMTDVIETAKILSALSVDGVKIHSLYVVEGTALGKMYKKGLIQICDLHEY
IERVITFLEFLDPEIVIHRLVADPPKEGTLFANWGLPKIEIINRIEKKMKEENRLQGGRFNYLNR

Specific function: Unknown

COG id: COG1242

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily [H]

Homologues:

Organism=Escherichia coli, GI2367204, Length=266, Percent_Identity=34.9624060150376, Blast_Score=181, Evalue=4e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 34792; Mature: 34792

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHKPYRHLKGYLIERYGEVVYRIPIDAGFTCPNKNGTKGRGGCIYCDPTGSGFSVDGQK
CCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHH
SIREQMLERIEKLRAKGIKKYMAYFQANSNTYAPVKKLKELYDSAISDDIVILDVSTRPD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCC
LASEETLELLESYKEKLDVIIEFGLQTANFWTLKKLNRGHTLAEFIDAVIRAKKHGLEVV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
AHVIVNLPWDTMTDVIETAKILSALSVDGVKIHSLYVVEGTALGKMYKKGLIQICDLHEY
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHH
IERVITFLEFLDPEIVIHRLVADPPKEGTLFANWGLPKIEIINRIEKKMKEENRLQGGRF
HHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCC
NYLNR
CCCCC
>Mature Secondary Structure
MNHKPYRHLKGYLIERYGEVVYRIPIDAGFTCPNKNGTKGRGGCIYCDPTGSGFSVDGQK
CCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHH
SIREQMLERIEKLRAKGIKKYMAYFQANSNTYAPVKKLKELYDSAISDDIVILDVSTRPD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCC
LASEETLELLESYKEKLDVIIEFGLQTANFWTLKKLNRGHTLAEFIDAVIRAKKHGLEVV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
AHVIVNLPWDTMTDVIETAKILSALSVDGVKIHSLYVVEGTALGKMYKKGLIQICDLHEY
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHH
IERVITFLEFLDPEIVIHRLVADPPKEGTLFANWGLPKIEIINRIEKKMKEENRLQGGRF
HHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCC
NYLNR
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]