Click here to switch to the map view.

The map label for this gene is fucA [H]

Identifier: 239618015

GI number: 239618015

Start: 1763396

End: 1764034

Strand: Direct

Name: fucA [H]

Synonym: Kole_1643

Alternate gene names: 239618015

Gene position: 1763396-1764034 (Clockwise)

Preceding gene: 239618013

Following gene: 239618016

Centisome position: 76.6

GC content: 41.47

Gene sequence:

>639_bases
GTGTACGAAGAATACAAAAAAGAAATTGTTGAATACGGCAGAAAGATACTTAACTCAAACCATGTTGTCGGTACGTCAGG
AAATATAAGTGTTAGGATAGGTAATACAAGTCTTTTTGCGATTACTCCCAGTGGAATGCCATACGAAGAATTAACCGTTG
ATGACATACCCATAATCGATGTCAAAGGCGAACGCATCGAAGGAACAAAAAAACCATCGATAGAGGTTCGAATGCATGGA
CTTATATACGAACACTATCCGGATGTTAGAGCGATAGTACATACTCATTCTGTTTATACCACGGTTTTGTCTCTTATTCG
CAAACCGCTGCCGATAATAAACGAGACCATGGTAATGGTAGGGGATGTTCCGGTAGCGGAGTTTGCACGCACCGGAAGCC
TCGAACTTGCAGAAAATGTCACTAAAGCTCTTAAAGGTAGAAGAGCAGTTATTCTTGCGAATCACGGATTGCTATGTGTC
GGAAAAAGTTTGAAAGAAAGTTTTGCGCTTTGTGAAGAGATAGAACGGGATGCCCAAATCTATGTCCTCGCATTGTCAAC
GGGTATGAGCGTTCATATTATCCCAGAAGAAGAAGCGAAAAAAACCCGTGAGTGGCTTTCAAAAAACTATGGGCAATGA

Upstream 100 bases:

>100_bases
ATTCTTTGTTATGTTCGAAGTGTTATCATGAATTTCAATTTACGGGTTGTTTGTGGGAAAATATGAAAGAACAGCAAAAA
ACAAAAAGGAGGAGTCAGAA

Downstream 100 bases:

>100_bases
TCTTTTAGCAATTTCTCAAATTTAAAAGAGCCGGGGAACTTTATGTGCTTTTATAGGGTTGTTGATAGGCAAAAACTTTG
ATTGGCAGTAGAGTATTTAT

Product: class II aldolase/adducin family protein

Products: NA

Alternate protein names: L-fuculose-1-phosphate aldolase [H]

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MYEEYKKEIVEYGRKILNSNHVVGTSGNISVRIGNTSLFAITPSGMPYEELTVDDIPIIDVKGERIEGTKKPSIEVRMHG
LIYEHYPDVRAIVHTHSVYTTVLSLIRKPLPIINETMVMVGDVPVAEFARTGSLELAENVTKALKGRRAVILANHGLLCV
GKSLKESFALCEEIERDAQIYVLALSTGMSVHIIPEEEAKKTREWLSKNYGQ

Sequences:

>Translated_212_residues
MYEEYKKEIVEYGRKILNSNHVVGTSGNISVRIGNTSLFAITPSGMPYEELTVDDIPIIDVKGERIEGTKKPSIEVRMHG
LIYEHYPDVRAIVHTHSVYTTVLSLIRKPLPIINETMVMVGDVPVAEFARTGSLELAENVTKALKGRRAVILANHGLLCV
GKSLKESFALCEEIERDAQIYVLALSTGMSVHIIPEEEAKKTREWLSKNYGQ
>Mature_212_residues
MYEEYKKEIVEYGRKILNSNHVVGTSGNISVRIGNTSLFAITPSGMPYEELTVDDIPIIDVKGERIEGTKKPSIEVRMHG
LIYEHYPDVRAIVHTHSVYTTVLSLIRKPLPIINETMVMVGDVPVAEFARTGSLELAENVTKALKGRRAVILANHGLLCV
GKSLKESFALCEEIERDAQIYVLALSTGMSVHIIPEEEAKKTREWLSKNYGQ

Specific function: Fucose metabolism; third step. [C]

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Homo sapiens, GI89276787, Length=188, Percent_Identity=27.1276595744681, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI297307160, Length=188, Percent_Identity=27.1276595744681, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI9257190, Length=188, Percent_Identity=27.1276595744681, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI297307158, Length=188, Percent_Identity=27.1276595744681, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI9257192, Length=188, Percent_Identity=27.1276595744681, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI9951927, Length=167, Percent_Identity=28.1437125748503, Blast_Score=64, Evalue=7e-11,
Organism=Homo sapiens, GI62912453, Length=167, Percent_Identity=28.1437125748503, Blast_Score=64, Evalue=7e-11,
Organism=Homo sapiens, GI9943848, Length=167, Percent_Identity=28.1437125748503, Blast_Score=64, Evalue=7e-11,
Organism=Escherichia coli, GI1789164, Length=190, Percent_Identity=38.9473684210526, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1789094, Length=189, Percent_Identity=28.042328042328, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1786247, Length=117, Percent_Identity=35.042735042735, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1790642, Length=124, Percent_Identity=29.8387096774194, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1790008, Length=183, Percent_Identity=27.3224043715847, Blast_Score=67, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI71989555, Length=183, Percent_Identity=28.9617486338798, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71989550, Length=183, Percent_Identity=28.9617486338798, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71989541, Length=183, Percent_Identity=28.9617486338798, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71989560, Length=183, Percent_Identity=28.9617486338798, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71989544, Length=183, Percent_Identity=28.9617486338798, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303
- InterPro:   IPR004782 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: =4.1.2.17 [H]

Molecular weight: Translated: 23680; Mature: 23680

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEEYKKEIVEYGRKILNSNHVVGTSGNISVRIGNTSLFAITPSGMPYEELTVDDIPIID
CCHHHHHHHHHHHHHHHCCCCEEECCCEEEEEECCEEEEEECCCCCCHHHCCCCCCEEEE
VKGERIEGTKKPSIEVRMHGLIYEHYPDVRAIVHTHSVYTTVLSLIRKPLPIINETMVMV
CCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
GDVPVAEFARTGSLELAENVTKALKGRRAVILANHGLLCVGKSLKESFALCEEIERDAQI
CCCCHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCEEEECHHHHHHHHHHHHHCCCCEE
YVLALSTGMSVHIIPEEEAKKTREWLSKNYGQ
EEEEEECCCEEEEECCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYEEYKKEIVEYGRKILNSNHVVGTSGNISVRIGNTSLFAITPSGMPYEELTVDDIPIID
CCHHHHHHHHHHHHHHHCCCCEEECCCEEEEEECCEEEEEECCCCCCHHHCCCCCCEEEE
VKGERIEGTKKPSIEVRMHGLIYEHYPDVRAIVHTHSVYTTVLSLIRKPLPIINETMVMV
CCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
GDVPVAEFARTGSLELAENVTKALKGRRAVILANHGLLCVGKSLKESFALCEEIERDAQI
CCCCHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCEEEECHHHHHHHHHHHHHCCCCEE
YVLALSTGMSVHIIPEEEAKKTREWLSKNYGQ
EEEEEECCCEEEEECCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]