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The map label for this gene is yisS [H]

Identifier: 239618013

GI number: 239618013

Start: 1761604

End: 1762725

Strand: Direct

Name: yisS [H]

Synonym: Kole_1641

Alternate gene names: 239618013

Gene position: 1761604-1762725 (Clockwise)

Preceding gene: 239618012

Following gene: 239618015

Centisome position: 76.52

GC content: 41.53

Gene sequence:

>1122_bases
GTGAGGTTACGTGCCGCATTAATCGGTTGTGGGCGTATCGGGACGAAAAAGCATATTGAGGCGTTTGCTGGTAATGCTGA
TAAAATAGAGCTCGTCGCGGTATGTGATATTGTGAAGGAAAAAGCTGAAAAAGCAGCAGAAGAGTATAAGAAACGTTGTG
GGTTACATGAAAACGAATACGTACAACCCACAACCCACAACCCACAACGTACTTACAAACCACAAGTTATTACTGACTAT
TCTGAATTACTTGATAAAGATATCGATTTTGTGACCATTGCCACAGAGAGCGGGAATCATTATCGTATAACCGTGGATTT
TCTTTCTGCCGGAAAACATGTCCTCGTTGAAAAACCAATGGCTTTGAGTACCAAGCATATGGACGAGATGATTTCTTTAG
CCAGTGAGAAACGGCTAAAACTTGGAGTGTGTTTTCAAAATAGATTCAATCCTCCTATACAGGAATTAAGGAAAAAAATT
GAAAGCGGTGCCTTTGGGATAATTTTCAATGCTACTGCCCGAATTCTCTGGAATAGAAACAGGGCGTATTACGAGCAGGC
ATCCTGGCGAGGTACGTGGAAAATGGACGGTGGAACTCTCATGAATCAATGTTCCCATAACATAGATCTTTTGCAGTGGA
TGCTCGGCGGGAATGTAAAGCGTATTTACGCTGTTACCAGGAATTACAACCACGATTATATAGAAGCAGAGGATTTTGGC
GTGGCTATTGTTGAATTTGATAATGGTACGGTTGGAATAATTGAAGGAACCGCAAATGTGTATCCAAGAAATCTTGAAGA
AACGCTGTCAGTATTTGGCGAAACCGGGACGGTTGTAATAGGAGGACTTGCCGTTAACAGAATCCAGACATGGAGATTTC
CAAACGAGGAAGAACACCCCTTTATGAGATTACCCGATCCGGAGACTGTTTATGGCAATGGACACGTACCTCTTTTTGAA
GATTTTGTTGAAGCAATTGTTGAAGACAGGAAACCCTATGTTTCTGGAGAAGATGGAAAAAAAGCTGTAGAGATAATTCT
TGGGATATACAAATCTGCCAAGGAAGGGAAACCGGTTGAATTTCCTATCGGAGAATTCTCAACTGAAGATATGAAGAGAT
AG

Upstream 100 bases:

>100_bases
TCAGATTAATGCTTCAGAAACTAATTGGTTCTATACAAAGGAAAGTCTGATAATTCTCGGGCTCTCGGATTCTCGGTTCT
CGTTCAAAGGAGGTGTTTCG

Downstream 100 bases:

>100_bases
AAAGAAACAAATTCTAAGGATTTCATGATGGTATGAAGTGGATAATTCTAAGAAAAGAAAAGCAGGGGAGTGCAATCGCT
CTCCTGCTTTCTTAAATTAC

Product: oxidoreductase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MRLRAALIGCGRIGTKKHIEAFAGNADKIELVAVCDIVKEKAEKAAEEYKKRCGLHENEYVQPTTHNPQRTYKPQVITDY
SELLDKDIDFVTIATESGNHYRITVDFLSAGKHVLVEKPMALSTKHMDEMISLASEKRLKLGVCFQNRFNPPIQELRKKI
ESGAFGIIFNATARILWNRNRAYYEQASWRGTWKMDGGTLMNQCSHNIDLLQWMLGGNVKRIYAVTRNYNHDYIEAEDFG
VAIVEFDNGTVGIIEGTANVYPRNLEETLSVFGETGTVVIGGLAVNRIQTWRFPNEEEHPFMRLPDPETVYGNGHVPLFE
DFVEAIVEDRKPYVSGEDGKKAVEIILGIYKSAKEGKPVEFPIGEFSTEDMKR

Sequences:

>Translated_373_residues
MRLRAALIGCGRIGTKKHIEAFAGNADKIELVAVCDIVKEKAEKAAEEYKKRCGLHENEYVQPTTHNPQRTYKPQVITDY
SELLDKDIDFVTIATESGNHYRITVDFLSAGKHVLVEKPMALSTKHMDEMISLASEKRLKLGVCFQNRFNPPIQELRKKI
ESGAFGIIFNATARILWNRNRAYYEQASWRGTWKMDGGTLMNQCSHNIDLLQWMLGGNVKRIYAVTRNYNHDYIEAEDFG
VAIVEFDNGTVGIIEGTANVYPRNLEETLSVFGETGTVVIGGLAVNRIQTWRFPNEEEHPFMRLPDPETVYGNGHVPLFE
DFVEAIVEDRKPYVSGEDGKKAVEIILGIYKSAKEGKPVEFPIGEFSTEDMKR
>Mature_373_residues
MRLRAALIGCGRIGTKKHIEAFAGNADKIELVAVCDIVKEKAEKAAEEYKKRCGLHENEYVQPTTHNPQRTYKPQVITDY
SELLDKDIDFVTIATESGNHYRITVDFLSAGKHVLVEKPMALSTKHMDEMISLASEKRLKLGVCFQNRFNPPIQELRKKI
ESGAFGIIFNATARILWNRNRAYYEQASWRGTWKMDGGTLMNQCSHNIDLLQWMLGGNVKRIYAVTRNYNHDYIEAEDFG
VAIVEFDNGTVGIIEGTANVYPRNLEETLSVFGETGTVVIGGLAVNRIQTWRFPNEEEHPFMRLPDPETVYGNGHVPLFE
DFVEAIVEDRKPYVSGEDGKKAVEIILGIYKSAKEGKPVEFPIGEFSTEDMKR

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=373, Percent_Identity=25.4691689008043, Blast_Score=86, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 42257; Mature: 42257

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRAALIGCGRIGTKKHIEAFAGNADKIELVAVCDIVKEKAEKAAEEYKKRCGLHENEY
CCCCEEEEECCCCCCHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VQPTTHNPQRTYKPQVITDYSELLDKDIDFVTIATESGNHYRITVDFLSAGKHVLVEKPM
CCCCCCCCCCCCCCCEECCHHHHHCCCCCEEEEEECCCCEEEEEEEEECCCCEEEEECCC
ALSTKHMDEMISLASEKRLKLGVCFQNRFNPPIQELRKKIESGAFGIIFNATARILWNRN
HHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECEEEEEECCC
RAYYEQASWRGTWKMDGGTLMNQCSHNIDLLQWMLGGNVKRIYAVTRNYNHDYIEAEDFG
HHHHHCCCCCEEEEECCCHHHHHHCCCHHHHHHHHCCCEEEEEEEEECCCCCEEEECCCC
VAIVEFDNGTVGIIEGTANVYPRNLEETLSVFGETGTVVIGGLAVNRIQTWRFPNEEEHP
EEEEEECCCEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEECEEEEEEEECCCCCCCCCC
FMRLPDPETVYGNGHVPLFEDFVEAIVEDRKPYVSGEDGKKAVEIILGIYKSAKEGKPVE
EEECCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
FPIGEFSTEDMKR
CCCCCCCHHHHCC
>Mature Secondary Structure
MRLRAALIGCGRIGTKKHIEAFAGNADKIELVAVCDIVKEKAEKAAEEYKKRCGLHENEY
CCCCEEEEECCCCCCHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VQPTTHNPQRTYKPQVITDYSELLDKDIDFVTIATESGNHYRITVDFLSAGKHVLVEKPM
CCCCCCCCCCCCCCCEECCHHHHHCCCCCEEEEEECCCCEEEEEEEEECCCCEEEEECCC
ALSTKHMDEMISLASEKRLKLGVCFQNRFNPPIQELRKKIESGAFGIIFNATARILWNRN
HHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECEEEEEECCC
RAYYEQASWRGTWKMDGGTLMNQCSHNIDLLQWMLGGNVKRIYAVTRNYNHDYIEAEDFG
HHHHHCCCCCEEEEECCCHHHHHHCCCHHHHHHHHCCCEEEEEEEEECCCCCEEEECCCC
VAIVEFDNGTVGIIEGTANVYPRNLEETLSVFGETGTVVIGGLAVNRIQTWRFPNEEEHP
EEEEEECCCEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEECEEEEEEEECCCCCCCCCC
FMRLPDPETVYGNGHVPLFEDFVEAIVEDRKPYVSGEDGKKAVEIILGIYKSAKEGKPVE
EEECCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
FPIGEFSTEDMKR
CCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377; 8407808 [H]