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The map label for this gene is panD

Identifier: 239617915

GI number: 239617915

Start: 1653511

End: 1653858

Strand: Direct

Name: panD

Synonym: Kole_1543

Alternate gene names: 239617915

Gene position: 1653511-1653858 (Clockwise)

Preceding gene: 239617912

Following gene: 239617916

Centisome position: 71.83

GC content: 40.52

Gene sequence:

>348_bases
GTGTTCAGGATTATGCAAAAATCAAAGATACATAGGGCTACTGTTACAGACAAGAACCTCAATTATGAGGGAAGCATAAC
CATAGATTACCGGCTTATGAAATTGGCGGATATAAGGGAAAACGAGCTGGTGCAGGTCGTTAATATAAACAACGGTGAAA
GATTTGAAACCTATGTCATTAAGGGTGAAGAAGGGTCTGGCGTTATCGCGTTAAATGGTGCTGCTGCCAGATTGGCGGAG
ATCGGTGACAGGGTTATTATAATTTCTTACGCTATTTATAACGATGATGAGTATAAACCTCCGAAGATTGTGAAGGTTAC
TGAGAAAAACGAACCGATCGAGAAGTAA

Upstream 100 bases:

>100_bases
TTAAATCTCTTCATGTCATCGAACCTCCAAAACAATGTTATCACATAAGGAGGTTGAGTGATGTAAAATATCCTTAGAAG
AAGATATGGAGGTGTTTGGT

Downstream 100 bases:

>100_bases
CATGAGTATCCTCGGGATAGTTGTTGAATACAATCCTTTCCACAATGGGCATCTTTTCCATTTGAAAAAGGCGAAAGAGC
TCATAAACCCAGACCTGACA

Product: aspartate 1-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MFRIMQKSKIHRATVTDKNLNYEGSITIDYRLMKLADIRENELVQVVNINNGERFETYVIKGEEGSGVIALNGAAARLAE
IGDRVIIISYAIYNDDEYKPPKIVKVTEKNEPIEK

Sequences:

>Translated_115_residues
MFRIMQKSKIHRATVTDKNLNYEGSITIDYRLMKLADIRENELVQVVNINNGERFETYVIKGEEGSGVIALNGAAARLAE
IGDRVIIISYAIYNDDEYKPPKIVKVTEKNEPIEK
>Mature_115_residues
MFRIMQKSKIHRATVTDKNLNYEGSITIDYRLMKLADIRENELVQVVNINNGERFETYVIKGEEGSGVIALNGAAARLAE
IGDRVIIISYAIYNDDEYKPPKIVKVTEKNEPIEK

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=103, Percent_Identity=45.6310679611651, Blast_Score=98, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND_KOSOT (C5CEQ3)

Other databases:

- EMBL:   CP001634
- RefSeq:   YP_002941237.1
- GeneID:   7968620
- GenomeReviews:   CP001634_GR
- KEGG:   kol:Kole_1543
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294
- TIGRFAMs:   TIGR00223

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 13102; Mature: 13102

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: ACT_SITE 25-25 ACT_SITE 58-58 BINDING 57-57

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRIMQKSKIHRATVTDKNLNYEGSITIDYRLMKLADIRENELVQVVNINNGERFETYVI
CCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEECCCCCCEEEEEECCCCCEEEEEEE
KGEEGSGVIALNGAAARLAEIGDRVIIISYAIYNDDEYKPPKIVKVTEKNEPIEK
ECCCCCEEEEECCCHHHHHHCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MFRIMQKSKIHRATVTDKNLNYEGSITIDYRLMKLADIRENELVQVVNINNGERFETYVI
CCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEECCCCCCEEEEEECCCCCEEEEEEE
KGEEGSGVIALNGAAARLAEIGDRVIIISYAIYNDDEYKPPKIVKVTEKNEPIEK
ECCCCCEEEEECCCHHHHHHCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA