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The map label for this gene is nifU [H]

Identifier: 239617863

GI number: 239617863

Start: 1590812

End: 1591252

Strand: Direct

Name: nifU [H]

Synonym: Kole_1490

Alternate gene names: 239617863

Gene position: 1590812-1591252 (Clockwise)

Preceding gene: 239617862

Following gene: 239617864

Centisome position: 69.1

GC content: 38.32

Gene sequence:

>441_bases
ATGAGTGTAGAGGATCTTTATTCTGAATTTATTTTATATCATTACAAGAACTCACCTTACAAAGGTGTACTGGAAGACGC
AACCAATGATGAAGAAGGGAAGAACCTTTCCTGTGGTGATCAGATACATGTTTATGTGAAGTTTAATGACAACAAAATTG
AGACAATATCCTTTGATGGGCATGGTTGCGCCATAAGTATGGCATCGGCTTCAATAATGGCAGAAACCCTTTCGGGAAAA
TCAGTAGAAGAGGCCAGACTGATCATGGAGGAATTTTTTAAAATGCTGAAGGGAGAGAATCACAATTTAGATATTCTAGG
AGATGCTGCTATCTTTGACAACGTGAAGAGGTTTCCAATGAGAGTTAAATGTGCTTCACTTGCCTGGAGAACATTAGAGA
GAATAATTGACGAAAGGGAACAAAAAAAGGCCGGTGAATAA

Upstream 100 bases:

>100_bases
GGGTTGTCTCCCTTTGTAGAGCTTCTTTCTACATTTACAATGTTTTTGAAGATGTTGATAGGCTTGCGGAAGGGATAAGG
AAAGCTTTGAGGTGGTTTGC

Downstream 100 bases:

>100_bases
CACCGGCTTAATGTCCTTTTTTCCTGCTGAAGTAACCCCTGCCGTAATTATACATTTTTTTTACCGGTAATTTCAACATT
TAGTAGAATAATGAAGGAGT

Product: SUF system FeS assembly protein, NifU family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSVEDLYSEFILYHYKNSPYKGVLEDATNDEEGKNLSCGDQIHVYVKFNDNKIETISFDGHGCAISMASASIMAETLSGK
SVEEARLIMEEFFKMLKGENHNLDILGDAAIFDNVKRFPMRVKCASLAWRTLERIIDEREQKKAGE

Sequences:

>Translated_146_residues
MSVEDLYSEFILYHYKNSPYKGVLEDATNDEEGKNLSCGDQIHVYVKFNDNKIETISFDGHGCAISMASASIMAETLSGK
SVEEARLIMEEFFKMLKGENHNLDILGDAAIFDNVKRFPMRVKCASLAWRTLERIIDEREQKKAGE
>Mature_145_residues
SVEDLYSEFILYHYKNSPYKGVLEDATNDEEGKNLSCGDQIHVYVKFNDNKIETISFDGHGCAISMASASIMAETLSGKS
VEEARLIMEEFFKMLKGENHNLDILGDAAIFDNVKRFPMRVKCASLAWRTLERIIDEREQKKAGE

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002871
- InterPro:   IPR011341 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 16592; Mature: 16461

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVEDLYSEFILYHYKNSPYKGVLEDATNDEEGKNLSCGDQIHVYVKFNDNKIETISFDG
CCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECC
HGCAISMASASIMAETLSGKSVEEARLIMEEFFKMLKGENHNLDILGDAAIFDNVKRFPM
CCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHCCC
RVKCASLAWRTLERIIDEREQKKAGE
CHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SVEDLYSEFILYHYKNSPYKGVLEDATNDEEGKNLSCGDQIHVYVKFNDNKIETISFDG
CHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECC
HGCAISMASASIMAETLSGKSVEEARLIMEEFFKMLKGENHNLDILGDAAIFDNVKRFPM
CCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHCCC
RVKCASLAWRTLERIIDEREQKKAGE
CHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]