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The map label for this gene is 239617617

Identifier: 239617617

GI number: 239617617

Start: 1316919

End: 1317821

Strand: Direct

Name: 239617617

Synonym: Kole_1238

Alternate gene names: NA

Gene position: 1316919-1317821 (Clockwise)

Preceding gene: 239617616

Following gene: 239617619

Centisome position: 57.2

GC content: 40.42

Gene sequence:

>903_bases
ATGGGTTATGGTTTTTCAACCTCTTATCTTTTGAGAATCTTTGGAATAACCAGAAGCAGTTACTATCGCAGGAAGAAACC
CTTGTTCTTTCTCAAAAAGGCGAAGACAGGTAGAAGGCGCAATTACTGTCTAAAGACAAACGGTGAAAAGTTCGAAGATA
AAGAGCTTGAAAAACTACTCAAAGGCATATACAGCAGAGTGAATCCATATGAACCTGAGTATTATCTGAAAGTGCTAGGA
AGCAAGAAGCTCAGCAAGTATTTTCTGAATGAATTTGGGATAATAGTGAACCACAAGAAAGTACACAGAATGAGAAAGAA
GCTGGGATATGTCAGGAAATACTGGCCGAAACAGCACCATCCTGTTAGGCGCTCAACCCAGCATGAGATAGACAGGACAG
GAATACTGTGGGAAGCAGATATTAAGTACATAACCACAATACAGGAAGGGAATATAGCCTTATTGGACATAATAGATGTA
TATTCAAGGGAAATAGTGGGTTCATATCTTGGGAAGAGTTGCAAGTGCAAAGATTTTACTCGAACACTGGGAAGGGCAAT
GCTTTACCAGGAAACGGTACCTCAGTTGGTCCGTACGGATAATGGAAGCCTGTTTACAGCTAATTACACCCGGGAATATT
TTGAAAAGAACGAGATAATCCAGGAATTTGGGATAAAGCACCACCCTGATTCCCAGGCCTTTATTGAATCACAGCATTCG
AATGTGCAAAGGGAATTTGTGGCTATGAATGTGTTTGAGAGAGCGGAAGACGTTTACCGAAAATACCAGGTGTACATGGA
TTTCTATCATAATCTCAGACCACATGGTTCTTTGAAATACATGACACCACAAGCCTTTAAGAAACACTGTAGCATTTCCA
TGATTCAGTCTGTTAAAGCTTGA

Upstream 100 bases:

>100_bases
AACTCATAATAGCAGAGAAAGAATTGGAAATAAGGTTGCTAAAAGAAGCTCTAAAAAAAACTGGAAAAGGCTAGCAGTTG
AACTTTTCGCTGAAACATAT

Downstream 100 bases:

>100_bases
TCTCGTTAACCCGTGTCTCATTATTGGGGGGCAGACCGGAGACAACCACGAAGTGGTTCGCAACAACTCCGCAGGAGTTC
GTATCAATCCCGAAGGGATT

Product: Integrase catalytic region

Products: NA

Alternate protein names: Transposase; Integrase Catalytic Subunit; Transposase And Inactivated Derivatives; Transposase B Of IS; ISRSO16-Transposase ORFB Protein; ISPsy9 Transposase OrfB; Integrase Core Domain Protein; Transposase B; Integrase Core Domain Contained Protein; IS3 Family Transposase; Integrase/Transposase

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MGYGFSTSYLLRIFGITRSSYYRRKKPLFFLKKAKTGRRRNYCLKTNGEKFEDKELEKLLKGIYSRVNPYEPEYYLKVLG
SKKLSKYFLNEFGIIVNHKKVHRMRKKLGYVRKYWPKQHHPVRRSTQHEIDRTGILWEADIKYITTIQEGNIALLDIIDV
YSREIVGSYLGKSCKCKDFTRTLGRAMLYQETVPQLVRTDNGSLFTANYTREYFEKNEIIQEFGIKHHPDSQAFIESQHS
NVQREFVAMNVFERAEDVYRKYQVYMDFYHNLRPHGSLKYMTPQAFKKHCSISMIQSVKA

Sequences:

>Translated_300_residues
MGYGFSTSYLLRIFGITRSSYYRRKKPLFFLKKAKTGRRRNYCLKTNGEKFEDKELEKLLKGIYSRVNPYEPEYYLKVLG
SKKLSKYFLNEFGIIVNHKKVHRMRKKLGYVRKYWPKQHHPVRRSTQHEIDRTGILWEADIKYITTIQEGNIALLDIIDV
YSREIVGSYLGKSCKCKDFTRTLGRAMLYQETVPQLVRTDNGSLFTANYTREYFEKNEIIQEFGIKHHPDSQAFIESQHS
NVQREFVAMNVFERAEDVYRKYQVYMDFYHNLRPHGSLKYMTPQAFKKHCSISMIQSVKA
>Mature_299_residues
GYGFSTSYLLRIFGITRSSYYRRKKPLFFLKKAKTGRRRNYCLKTNGEKFEDKELEKLLKGIYSRVNPYEPEYYLKVLGS
KKLSKYFLNEFGIIVNHKKVHRMRKKLGYVRKYWPKQHHPVRRSTQHEIDRTGILWEADIKYITTIQEGNIALLDIIDVY
SREIVGSYLGKSCKCKDFTRTLGRAMLYQETVPQLVRTDNGSLFTANYTREYFEKNEIIQEFGIKHHPDSQAFIESQHSN
VQREFVAMNVFERAEDVYRKYQVYMDFYHNLRPHGSLKYMTPQAFKKHCSISMIQSVKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35722; Mature: 35591

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYGFSTSYLLRIFGITRSSYYRRKKPLFFLKKAKTGRRRNYCLKTNGEKFEDKELEKLL
CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEECCCCCCCCHHHHHHHH
KGIYSRVNPYEPEYYLKVLGSKKLSKYFLNEFGIIVNHKKVHRMRKKLGYVRKYWPKQHH
HHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHCCCCCC
PVRRSTQHEIDRTGILWEADIKYITTIQEGNIALLDIIDVYSREIVGSYLGKSCKCKDFT
CCHHHHHHHHHHCCCEEECCCEEEEEEECCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHH
RTLGRAMLYQETVPQLVRTDNGSLFTANYTREYFEKNEIIQEFGIKHHPDSQAFIESQHS
HHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
NVQREFVAMNVFERAEDVYRKYQVYMDFYHNLRPHGSLKYMTPQAFKKHCSISMIQSVKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GYGFSTSYLLRIFGITRSSYYRRKKPLFFLKKAKTGRRRNYCLKTNGEKFEDKELEKLL
CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEECCCCCCCCHHHHHHHH
KGIYSRVNPYEPEYYLKVLGSKKLSKYFLNEFGIIVNHKKVHRMRKKLGYVRKYWPKQHH
HHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHCCCCCC
PVRRSTQHEIDRTGILWEADIKYITTIQEGNIALLDIIDVYSREIVGSYLGKSCKCKDFT
CCHHHHHHHHHHCCCEEECCCEEEEEEECCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHH
RTLGRAMLYQETVPQLVRTDNGSLFTANYTREYFEKNEIIQEFGIKHHPDSQAFIESQHS
HHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
NVQREFVAMNVFERAEDVYRKYQVYMDFYHNLRPHGSLKYMTPQAFKKHCSISMIQSVKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA