| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617619
Identifier: 239617619
GI number: 239617619
Start: 1318129
End: 1318563
Strand: Direct
Name: 239617619
Synonym: Kole_1240
Alternate gene names: NA
Gene position: 1318129-1318563 (Clockwise)
Preceding gene: 239617617
Following gene: 239617621
Centisome position: 57.26
GC content: 37.7
Gene sequence:
>435_bases GTGAGAAAAAGAGGATTTTCACTCGTTGAGCTTTTGATCGTTTTAGCGGTTATTGCTGCATTGATCGCCACAATTACACC AGTTGCGTTAAACGCGATCAAAAAAGCACAGGCTACAAAAGTTGCGCAGAACTTGAAAACACTTGCCAATGCCTTTGAAA ACAAACTTTATATTGATGGTGAAATTCCAGCATCTATTAATGAGCTTGGAAGAGATATTGATACTGACAACTATGGTGTC GCATATTATATAACCAGCCCTGGAACCTATGATGTTATTGTGTACACCAAAGAAGATGTTGATTTTACCATTGTTAAGAA TATATTGAGTGACGCATGGAATGGACCAATGCCTTCTTATTTTAATGTGCTACCTGGTTCTGCAGATACAACCGACGTAA CAGCATGGTATGAATTTATCTTCACAGTATATTGA
Upstream 100 bases:
>100_bases TTTCTTATTTTCATTGCCAATAGCGACTCCTAATTGGCACAATTTTGCATACAGATGATTGAAGCAAAGACTACTACTAT TCTTTAAAGGAGGGATGTAG
Downstream 100 bases:
>100_bases TATCATATAATTGACCCCGATAACAGAAAATGGGGACTGTACCGCAGTGGACTGTCCCCATTTTCTGTTTTGACTGTAGC TCCTATTTTAAGCAATGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MRKRGFSLVELLIVLAVIAALIATITPVALNAIKKAQATKVAQNLKTLANAFENKLYIDGEIPASINELGRDIDTDNYGV AYYITSPGTYDVIVYTKEDVDFTIVKNILSDAWNGPMPSYFNVLPGSADTTDVTAWYEFIFTVY
Sequences:
>Translated_144_residues MRKRGFSLVELLIVLAVIAALIATITPVALNAIKKAQATKVAQNLKTLANAFENKLYIDGEIPASINELGRDIDTDNYGV AYYITSPGTYDVIVYTKEDVDFTIVKNILSDAWNGPMPSYFNVLPGSADTTDVTAWYEFIFTVY >Mature_144_residues MRKRGFSLVELLIVLAVIAALIATITPVALNAIKKAQATKVAQNLKTLANAFENKLYIDGEIPASINELGRDIDTDNYGV AYYITSPGTYDVIVYTKEDVDFTIVKNILSDAWNGPMPSYFNVLPGSADTTDVTAWYEFIFTVY
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15894; Mature: 15894
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKRGFSLVELLIVLAVIAALIATITPVALNAIKKAQATKVAQNLKTLANAFENKLYIDG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECC EIPASINELGRDIDTDNYGVAYYITSPGTYDVIVYTKEDVDFTIVKNILSDAWNGPMPSY CCCCCHHHHCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCH FNVLPGSADTTDVTAWYEFIFTVY HHCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MRKRGFSLVELLIVLAVIAALIATITPVALNAIKKAQATKVAQNLKTLANAFENKLYIDG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECC EIPASINELGRDIDTDNYGVAYYITSPGTYDVIVYTKEDVDFTIVKNILSDAWNGPMPSY CCCCCHHHHCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCH FNVLPGSADTTDVTAWYEFIFTVY HHCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA